FFCP PHASE1:Mm9::chr11:100002942..100002960,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:100002942..100002960,- | |id=chr11:100002942..100002960,- | ||
|ontology_enrichment_celltype=CL:0002563!1.25e-09!9;CL:0002251!1.25e-09!9;CL:0002076!1.27e-09!15;CL:0000066!1.33e-07!25;CL:0000239!1.83e-07!6;CL:0000677!1.83e-07!6;CL:0000212!1.83e-07!6;CL:0000584!1.83e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.25e-09!9;CL:0002251!1.25e-09!9;CL:0002076!1.27e-09!15;CL:0000066!1.33e-07!25;CL:0000239!1.83e-07!6;CL:0000677!1.83e-07!6;CL:0000212!1.83e-07!6;CL:0000584!1.83e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.42e-16,15;CL:0000066,1.03e-15,25;CL:0000239,1.78e-15,6;CL:0000677,1.78e-15,6;CL:0000584,1.78e-15,6;CL:0002563,2.63e-13,9;CL:0002251,2.63e-13,9;CL:0000075,3.59e-13,7;CL:0000223,9.36e-12,20;CL:0000068,1.00e-09,3;CL:0002202,1.00e-09,3;CL:0000069,1.00e-09,3;CL:0002632,1.00e-09,3;CL:0002368,1.00e-09,3;CL:0000307,1.00e-09,3;CL:0000377,1.00e-09,3;CL:0000682,7.80e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.87e-19!59;UBERON:0000160!1.12e-14!43;UBERON:0000344!8.46e-14!15;UBERON:0001242!1.38e-11!13;UBERON:0000060!1.38e-11!13;UBERON:0001262!1.38e-11!13;UBERON:0004786!1.38e-11!13;UBERON:0004119!6.37e-11!130;UBERON:0000925!6.37e-11!130;UBERON:0006595!6.37e-11!130;UBERON:0001007!1.47e-10!128;UBERON:0001555!1.47e-10!128;UBERON:0007026!1.47e-10!128;UBERON:0003350!1.25e-09!9;UBERON:0004808!1.25e-09!9;UBERON:0001277!1.25e-09!9;UBERON:0004921!2.43e-09!126;UBERON:0004185!2.43e-09!126;UBERON:0004923!4.94e-09!24;UBERON:0000485!2.18e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!9.87e-19!59;UBERON:0000160!1.12e-14!43;UBERON:0000344!8.46e-14!15;UBERON:0001242!1.38e-11!13;UBERON:0000060!1.38e-11!13;UBERON:0001262!1.38e-11!13;UBERON:0004786!1.38e-11!13;UBERON:0004119!6.37e-11!130;UBERON:0000925!6.37e-11!130;UBERON:0006595!6.37e-11!130;UBERON:0001007!1.47e-10!128;UBERON:0001555!1.47e-10!128;UBERON:0007026!1.47e-10!128;UBERON:0003350!1.25e-09!9;UBERON:0004808!1.25e-09!9;UBERON:0001277!1.25e-09!9;UBERON:0004921!2.43e-09!126;UBERON:0004185!2.43e-09!126;UBERON:0004923!4.94e-09!24;UBERON:0000485!2.18e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.15e-24,15;UBERON:0001242,7.46e-19,13;UBERON:0001262,7.46e-19,13;UBERON:0004786,7.46e-19,13;UBERON:0005409,8.49e-18,47;UBERON:0004923,2.30e-16,24;UBERON:0000160,9.94e-16,31;UBERON:0003350,2.63e-13,9;UBERON:0004808,2.63e-13,9;UBERON:0001277,2.63e-13,9;UBERON:0004119,7.01e-12,118;UBERON:0000925,7.01e-12,118;UBERON:0006595,7.01e-12,118;UBERON:0001007,4.53e-11,116;UBERON:0001555,4.53e-11,116;UBERON:0007026,4.53e-11,116;UBERON:0000485,1.04e-10,11;UBERON:0003126,1.00e-09,3;UBERON:0001005,1.00e-09,3;UBERON:0007196,1.00e-09,3;UBERON:0001558,1.00e-09,3;UBERON:0000331,2.75e-09,3;UBERON:0002116,2.75e-09,3;UBERON:0001204,2.75e-09,3;UBERON:0001168,2.75e-09,3;UBERON:0004921,4.25e-09,114;UBERON:0007023,4.26e-07,51;UBERON:0002108,4.82e-07,4;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2 | |||
|phase1_expression=0,2.79180326111489,2.72999543633722,1.51232105653415,2.00358291978539,1.6787927191189,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,12.3194165550923,5.96464130774642,2.29692785646008,3.01533397311352,5.17130958446134,8.7410772949932,7.81293402255785,3.10422714917427,0,0,0,0.866554859253824,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,12.7729714196616,12.1612735428047,13.1436355703844,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0.229902104433473,0.540186389416048,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,2.37264530772256,0.658795818896044,0.251335208800269,0.596869416123452,0.38992817423824,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0.578596234326046,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,1.32317038832977,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,8.59203556213602,0,0.203319467126849,0.756037385752609,1.25452977608681,1.31017538247707,0.944050424693745,0.826534557253359,2.6175594198403,2.46268449254406,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,1.25599399253266,1.34307693091263,1.35232715822533,0.187682475451182,0.915758121336325,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0.354951612318675,0,0,0.376437521661322,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,2.72999543633722,1.51232105653415,2.00358291978539,1.6787927191189,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,12.3194165550923,5.96464130774642,2.29692785646008,3.01533397311352,5.17130958446134,8.7410772949932,7.81293402255785,3.10422714917427,0,0,0,0.866554859253824,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,12.7729714196616,12.1612735428047,13.1436355703844,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0.229902104433473,0.540186389416048,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,2.37264530772256,0.658795818896044,0.251335208800269,0.596869416123452,0.38992817423824,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0.578596234326046,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,1.32317038832977,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0,0,8.59203556213602,0,0.203319467126849,0.756037385752609,1.25452977608681,1.31017538247707,0.944050424693745,0.826534557253359,2.6175594198403,2.46268449254406,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,1.25599399253266,1.34307693091263,1.35232715822533,0.187682475451182,0.915758121336325,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0.354951612318675,0,0,0.376437521661322,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:100002942..100002960,- | |short_description=p@chr11:100002942..100002960,- | ||
}} | }} |
Revision as of 11:11, 14 November 2012
Short description: | p@chr11:100002942..100002960, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100002942..100002960, - |
Coexpression cluster: | MCL_coexpression_mm9:1051 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.42e-16 | 15 |
epithelial cell | 1.03e-15 | 25 |
brush border epithelial cell | 1.78e-15 | 6 |
gut absorptive cell | 1.78e-15 | 6 |
enterocyte | 1.78e-15 | 6 |
intestinal epithelial cell | 2.63e-13 | 9 |
epithelial cell of alimentary canal | 2.63e-13 | 9 |
columnar/cuboidal epithelial cell | 3.59e-13 | 7 |
endodermal cell | 9.36e-12 | 20 |
duct epithelial cell | 1.00e-09 | 3 |
epithelial cell of tracheobronchial tree | 1.00e-09 | 3 |
branched duct epithelial cell | 1.00e-09 | 3 |
epithelial cell of lower respiratory tract | 1.00e-09 | 3 |
respiratory epithelial cell | 1.00e-09 | 3 |
tracheal epithelial cell | 1.00e-09 | 3 |
tracheoblast | 1.00e-09 | 3 |
M cell of gut | 7.80e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.15e-24 | 15 |
intestinal mucosa | 7.46e-19 | 13 |
wall of intestine | 7.46e-19 | 13 |
gastrointestinal system mucosa | 7.46e-19 | 13 |
gastrointestinal system | 8.49e-18 | 47 |
organ component layer | 2.30e-16 | 24 |
intestine | 9.94e-16 | 31 |
epithelium of mucosa | 2.63e-13 | 9 |
gastrointestinal system epithelium | 2.63e-13 | 9 |
intestinal epithelium | 2.63e-13 | 9 |
endoderm-derived structure | 7.01e-12 | 118 |
endoderm | 7.01e-12 | 118 |
presumptive endoderm | 7.01e-12 | 118 |
digestive system | 4.53e-11 | 116 |
digestive tract | 4.53e-11 | 116 |
primitive gut | 4.53e-11 | 116 |
simple columnar epithelium | 1.04e-10 | 11 |
trachea | 1.00e-09 | 3 |
respiratory airway | 1.00e-09 | 3 |
tracheobronchial tree | 1.00e-09 | 3 |
lower respiratory tract | 1.00e-09 | 3 |
ileal mucosa | 2.75e-09 | 3 |
ileum | 2.75e-09 | 3 |
mucosa of small intestine | 2.75e-09 | 3 |
wall of small intestine | 2.75e-09 | 3 |
subdivision of digestive tract | 4.25e-09 | 114 |
adult organism | 4.26e-07 | 51 |
small intestine | 4.82e-07 | 4 |
gut-associated lymphoid tissue | 7.62e-07 | 2 |
mucosa-associated lymphoid tissue | 7.62e-07 | 2 |
lymphoid tissue | 7.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.