FFCP PHASE1:Mm9::chr18:74022848..74022869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr18:74022848..74022869,+ | |id=chr18:74022848..74022869,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.38e-19!9;CL:0002251!4.38e-19!9;CL:0000239!1.15e-13!6;CL:0000677!1.15e-13!6;CL:0000212!1.15e-13!6;CL:0000584!1.15e-13!6;CL:0000075!1.38e-11!7;CL:0002076!1.09e-10!15;CL:0000066!1.16e-10!25;CL:0000473!8.24e-08!3;CL:0000627!8.24e-08!3;CL:0000682!8.24e-08!3;CL:0000223!1.48e-07!20;CL:0002250!5.33e-07!3 | |ontology_enrichment_celltype=CL:0002563!4.38e-19!9;CL:0002251!4.38e-19!9;CL:0000239!1.15e-13!6;CL:0000677!1.15e-13!6;CL:0000212!1.15e-13!6;CL:0000584!1.15e-13!6;CL:0000075!1.38e-11!7;CL:0002076!1.09e-10!15;CL:0000066!1.16e-10!25;CL:0000473!8.24e-08!3;CL:0000627!8.24e-08!3;CL:0000682!8.24e-08!3;CL:0000223!1.48e-07!20;CL:0002250!5.33e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.54e-21,9;CL:0002251,1.54e-21,9;CL:0000239,1.45e-17,6;CL:0000677,1.45e-17,6;CL:0000584,1.45e-17,6;CL:0000075,4.94e-15,7;CL:0000066,6.29e-15,25;CL:0000682,3.20e-13,3;CL:0002076,1.28e-12,15;CL:0000223,2.90e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.89e-31!43;UBERON:0000344!7.20e-31!15;UBERON:0001242!5.27e-27!13;UBERON:0000060!5.27e-27!13;UBERON:0001262!5.27e-27!13;UBERON:0004786!5.27e-27!13;UBERON:0005409!4.73e-21!59;UBERON:0003350!4.38e-19!9;UBERON:0004808!4.38e-19!9;UBERON:0001277!4.38e-19!9;UBERON:0004923!7.84e-18!24;UBERON:0000485!2.89e-15!11;UBERON:0001007!2.10e-08!128;UBERON:0001555!2.10e-08!128;UBERON:0007026!2.10e-08!128;UBERON:0004119!3.63e-08!130;UBERON:0000925!3.63e-08!130;UBERON:0006595!3.63e-08!130;UBERON:0000331!1.58e-07!3;UBERON:0002116!1.58e-07!3;UBERON:0001204!1.58e-07!3;UBERON:0001168!1.58e-07!3;UBERON:0004921!5.18e-07!126;UBERON:0004185!5.18e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!1.89e-31!43;UBERON:0000344!7.20e-31!15;UBERON:0001242!5.27e-27!13;UBERON:0000060!5.27e-27!13;UBERON:0001262!5.27e-27!13;UBERON:0004786!5.27e-27!13;UBERON:0005409!4.73e-21!59;UBERON:0003350!4.38e-19!9;UBERON:0004808!4.38e-19!9;UBERON:0001277!4.38e-19!9;UBERON:0004923!7.84e-18!24;UBERON:0000485!2.89e-15!11;UBERON:0001007!2.10e-08!128;UBERON:0001555!2.10e-08!128;UBERON:0007026!2.10e-08!128;UBERON:0004119!3.63e-08!130;UBERON:0000925!3.63e-08!130;UBERON:0006595!3.63e-08!130;UBERON:0000331!1.58e-07!3;UBERON:0002116!1.58e-07!3;UBERON:0001204!1.58e-07!3;UBERON:0001168!1.58e-07!3;UBERON:0004921!5.18e-07!126;UBERON:0004185!5.18e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-39,31;UBERON:0000344,3.39e-31,15;UBERON:0001242,6.32e-30,13;UBERON:0001262,6.32e-30,13;UBERON:0004786,6.32e-30,13;UBERON:0005409,4.17e-25,47;UBERON:0003350,1.54e-21,9;UBERON:0004808,1.54e-21,9;UBERON:0001277,1.54e-21,9;UBERON:0004923,7.80e-19,24;UBERON:0000485,1.73e-17,11;UBERON:0002108,9.76e-10,4;UBERON:0001007,1.47e-09,116;UBERON:0001555,1.47e-09,116;UBERON:0007026,1.47e-09,116;UBERON:0004119,2.42e-09,118;UBERON:0000925,2.42e-09,118;UBERON:0006595,2.42e-09,118;UBERON:0004921,1.51e-08,114 | |||
|phase1_expression=0,2.44282785347553,2.72999543633722,7.56160528267075,5.00895729946347,2.85394762250213,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,0.91763712426868,3.44539178469012,6.46142994238612,2.37018355954478,2.85035129184561,4.78857246543868,0.886922042621219,0,0,0,1.44425809875637,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0,0,0.38660238396628,0,0.667134131534611,0.760902504450237,1.89811624617805,0.658795818896044,0.754005626400808,1.79060824837036,0.58489226135736,2.69645822596266,2.59365659849633,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.354951612318675,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.72999543633722,7.56160528267075,5.00895729946347,2.85394762250213,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,0.91763712426868,3.44539178469012,6.46142994238612,2.37018355954478,2.85035129184561,4.78857246543868,0.886922042621219,0,0,0,1.44425809875637,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0,0,0.38660238396628,0,0.667134131534611,0.760902504450237,1.89811624617805,0.658795818896044,0.754005626400808,1.79060824837036,0.58489226135736,2.69645822596266,2.59365659849633,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.354951612318675,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Mro | |short_description=p6@Mro | ||
}} | }} |
Revision as of 13:31, 14 November 2012
Short description: | p6@Mro |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mro_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -415bp_to_ENSMUST00000139821_5end |
EntrezGene: | Mro |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.54e-21 | 9 |
epithelial cell of alimentary canal | 1.54e-21 | 9 |
brush border epithelial cell | 1.45e-17 | 6 |
gut absorptive cell | 1.45e-17 | 6 |
enterocyte | 1.45e-17 | 6 |
columnar/cuboidal epithelial cell | 4.94e-15 | 7 |
epithelial cell | 6.29e-15 | 25 |
M cell of gut | 3.20e-13 | 3 |
endo-epithelial cell | 1.28e-12 | 15 |
endodermal cell | 2.90e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-39 | 31 |
mucosa | 3.39e-31 | 15 |
intestinal mucosa | 6.32e-30 | 13 |
wall of intestine | 6.32e-30 | 13 |
gastrointestinal system mucosa | 6.32e-30 | 13 |
gastrointestinal system | 4.17e-25 | 47 |
epithelium of mucosa | 1.54e-21 | 9 |
gastrointestinal system epithelium | 1.54e-21 | 9 |
intestinal epithelium | 1.54e-21 | 9 |
organ component layer | 7.80e-19 | 24 |
simple columnar epithelium | 1.73e-17 | 11 |
small intestine | 9.76e-10 | 4 |
digestive system | 1.47e-09 | 116 |
digestive tract | 1.47e-09 | 116 |
primitive gut | 1.47e-09 | 116 |
endoderm-derived structure | 2.42e-09 | 118 |
endoderm | 2.42e-09 | 118 |
presumptive endoderm | 2.42e-09 | 118 |
subdivision of digestive tract | 1.51e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.