FFCP PHASE1:Mm9::chrX:71156622..71156643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chrX:71156622..71156643,- | |id=chrX:71156622..71156643,- | ||
|ontology_enrichment_celltype=CL:0000988!7.17e-11!32;CL:0002032!7.17e-11!32;CL:0000037!7.17e-11!32;CL:0000566!7.17e-11!32;CL:0000837!7.17e-11!32;CL:0002031!2.76e-09!25;CL:0000738!1.33e-08!17;CL:0002087!1.33e-08!17;CL:0000838!2.64e-07!12;CL:0000542!7.62e-07!13;CL:0000051!7.62e-07!13 | |ontology_enrichment_celltype=CL:0000988!7.17e-11!32;CL:0002032!7.17e-11!32;CL:0000037!7.17e-11!32;CL:0000566!7.17e-11!32;CL:0000837!7.17e-11!32;CL:0002031!2.76e-09!25;CL:0000738!1.33e-08!17;CL:0002087!1.33e-08!17;CL:0000838!2.64e-07!12;CL:0000542!7.62e-07!13;CL:0000051!7.62e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.14e-11,32;CL:0002032,4.14e-11,32;CL:0000037,4.14e-11,32;CL:0000837,4.14e-11,32;CL:0002031,1.65e-09,25;CL:0000738,1.10e-08,17;CL:0002087,1.10e-08,17;CL:0000838,2.25e-07,12;CL:0000542,6.59e-07,13;CL:0000051,6.59e-07,13;CL:0000084,9.43e-07,11;CL:0000827,9.43e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.06e-20!70;UBERON:0002193!2.66e-19!48;UBERON:0002390!7.79e-18!45;UBERON:0003061!7.79e-18!45;UBERON:0005057!1.45e-11!51;UBERON:0001007!4.94e-11!128;UBERON:0001555!4.94e-11!128;UBERON:0007026!4.94e-11!128;UBERON:0004119!1.59e-10!130;UBERON:0000925!1.59e-10!130;UBERON:0006595!1.59e-10!130;UBERON:0004921!2.28e-10!126;UBERON:0004185!2.28e-10!126;UBERON:0004177!3.60e-10!29;UBERON:0002371!1.23e-08!16;UBERON:0001041!1.32e-08!92;UBERON:0001474!2.04e-08!22;UBERON:0004765!2.04e-08!22;UBERON:0001434!2.04e-08!22;UBERON:0005911!2.31e-08!69;UBERON:0000077!8.93e-08!97;UBERON:0003408!9.56e-08!24;UBERON:0003929!1.31e-07!55;UBERON:0002370!2.01e-07!23;UBERON:0000974!2.01e-07!23;UBERON:0004807!2.01e-07!23;UBERON:0005058!2.01e-07!23;UBERON:0003351!2.01e-07!23;UBERON:0009113!2.01e-07!23;UBERON:0003295!2.01e-07!23;UBERON:0009722!2.01e-07!23;UBERON:0005562!2.01e-07!23;UBERON:0007690!2.01e-07!23 | |ontology_enrichment_uberon=UBERON:0002405!1.06e-20!70;UBERON:0002193!2.66e-19!48;UBERON:0002390!7.79e-18!45;UBERON:0003061!7.79e-18!45;UBERON:0005057!1.45e-11!51;UBERON:0001007!4.94e-11!128;UBERON:0001555!4.94e-11!128;UBERON:0007026!4.94e-11!128;UBERON:0004119!1.59e-10!130;UBERON:0000925!1.59e-10!130;UBERON:0006595!1.59e-10!130;UBERON:0004921!2.28e-10!126;UBERON:0004185!2.28e-10!126;UBERON:0004177!3.60e-10!29;UBERON:0002371!1.23e-08!16;UBERON:0001041!1.32e-08!92;UBERON:0001474!2.04e-08!22;UBERON:0004765!2.04e-08!22;UBERON:0001434!2.04e-08!22;UBERON:0005911!2.31e-08!69;UBERON:0000077!8.93e-08!97;UBERON:0003408!9.56e-08!24;UBERON:0003929!1.31e-07!55;UBERON:0002370!2.01e-07!23;UBERON:0000974!2.01e-07!23;UBERON:0004807!2.01e-07!23;UBERON:0005058!2.01e-07!23;UBERON:0003351!2.01e-07!23;UBERON:0009113!2.01e-07!23;UBERON:0003295!2.01e-07!23;UBERON:0009722!2.01e-07!23;UBERON:0005562!2.01e-07!23;UBERON:0007690!2.01e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.90e-20,48;UBERON:0002405,5.90e-20,48;UBERON:0002390,1.83e-18,45;UBERON:0003061,1.83e-18,45;UBERON:0004177,1.16e-10,29;UBERON:0005057,1.16e-10,29;UBERON:0001007,1.50e-10,116;UBERON:0001555,1.50e-10,116;UBERON:0007026,1.50e-10,116;UBERON:0004119,4.81e-10,118;UBERON:0000925,4.81e-10,118;UBERON:0006595,4.81e-10,118;UBERON:0004921,6.77e-10,114;UBERON:0002371,1.02e-08,16;UBERON:0001041,1.27e-08,80;UBERON:0001474,2.12e-08,22;UBERON:0004765,2.12e-08,22;UBERON:0001434,2.12e-08,22;UBERON:0005911,2.50e-08,69;UBERON:0003408,3.49e-08,24;UBERON:0002370,7.44e-08,23;UBERON:0000974,7.44e-08,23;UBERON:0004807,7.44e-08,23;UBERON:0005058,7.44e-08,23;UBERON:0003351,7.44e-08,23;UBERON:0009113,7.44e-08,23;UBERON:0003295,7.44e-08,23;UBERON:0009722,7.44e-08,23;UBERON:0005562,7.44e-08,23;UBERON:0007690,7.44e-08,23;UBERON:0000077,1.24e-07,35;UBERON:0003929,1.46e-07,55;UBERON:0006562,5.60e-07,24;UBERON:0001557,5.60e-07,24;UBERON:0001042,5.60e-07,24;UBERON:0008814,5.60e-07,24;UBERON:0009145,5.60e-07,24 | |||
|phase1_expression=1.28119077683835,5.93258192986914,5.45999087267443,3.0246421130683,6.51164448930251,4.53274034162102,3.73780224952841,185.808462432428,22.80777298857,31.1305820008251,6.67750076079469,5.50427897067821,178.562361318248,217.764222425723,27.3150004688843,32.8009933171518,9.79386629379405,143.535285237998,143.695926418814,129.014454146601,5.95303031057488,37.3333976515329,39.1799683708403,16.1592347021341,13.7645568640302,2.29692785646008,3.87685796543167,5.817723282519,2.09025761402011,3.02436155711917,4.21287970245079,1.27006134691926,1.23012957516914,0,0.577703239502549,0.997407872150954,0.408338712524738,236.051839735616,123.45098443476,190.562642806463,244.704299020902,201.498418062741,217.023127804926,0,0,0,0,1.96222640742402,4.83309602015838,1.36100929351998,0.419959264876088,0,128.689258846284,129.839823420031,115.95236070415,0,1.71920063963254,1.03134418455488,0.202316460859598,1.05798195854407,1.26766280701236,0,0,39.1456377017409,51.4210508534827,41.2078466668738,23.9680088414724,11.5265491596466,0.933206510776299,0.540023753326763,0,1.99955689082663,1.98781686856452,0.244981598429908,0.670918297127655,0,1.10115880999389,1.14918604276669,1.84327839907492,0.527545150920775,0.457438218012048,0,1.3959149950069,1.68828783009504,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,1.13589289999776,0.302286240427142,0.579728977403356,6.0229671388697,0,0.539703191637817,1.94932925234301,2.24013443548668,9.26933172869562,0,0,0,0.563373679106722,0,0,0,0,0,0,8.90634261808668,110.048600550048,3.56261133755579,0.867426633830679,1.52232739156071,1.15307748628029,1.3565037649736,1.76383060703557,1.88499886994513,0,5.20557684911682,74.3072863637894,7.117741397686,22.7466764014205,17.9403843660032,1.86391761218122,0.585561594023094,0.41889341362691,5.36459815938042,10.9031763300387,7.7987355029143,11.4363204365758,1.3481157546434,0,0.251308704225729,0.695297280769106,0.255715457330331,0.62336413367868,1.62241263067758,2.13862664085664,20.7759640918855,2.0217820674694,1.47309299120532,2.08192708740326,2.06911893990126,0.540186389416048,1.50704817835715,0.884474488967262,0.768682321709099,0.749613796477831,0.517406741478031,0.862271971731369,1.70195472151037,1.05570674498369,1.97276159184817,2.22437799380478,2.78601733217733,1.85203922767149,2.9855140022774,10.5331978096985,11.8380037272769,14.7765019685708,0.414251545071004,1.87620847984877,0.720248245844059,0.473489471170421,1.37734962223183,0.925602677324269,0.465067889500816,0.536546802799238,1.05088808130453,1.15191894939436,1.97000956894914,1.54030738137126,4.23979963533464,2.85415149878366,2.54992195644706,0.420579897128254,0.308713837137853,7.93005079161115,2.90895623329899,2.34617075588757,2.09013004674395,2.96395161040815,4.84040459096022,7.56085349072559,6.46767128782701,5.69434873853414,3.78807595865225,6.28338022000674,4.77495532898762,5.45899443933536,7.19055526923377,3.45820879799511,4.18196673834171,1.51734320762465,1.14248512609729,1.1270773567308,1.01825663922657,1.16371492300575,1.33258057791605,2.40298841072178,2.06654207171443,3.767969468193,2.59134044235781,5.63259991465583,4.50481785433454,6.2898878436225,11.0182435068578,8.52012509831712,17.364755502174,11.7127891819453,16.1109836972454,11.5116011010275,13.1789478330279,14.3768206527355,16.0020607497456,7.48890415474945,5.30415643688935,4.30553792452589,4.82443521363367,16.9972934953276,1.32643988239339,1.46668478797823,2.03694102930226,1.64283173801951,4.52266895092903,2.85652369063216,2.34160377429359,5.04432461139811,4.65075848262427,8.6105575075043,12.7813385478276,13.9874835311375,8.96824163205372,40.7136466636035,75.6028900508006,7.37646409528554,5.51873492609465,0.80275294993896,0.703270119553219,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0.963963949265421,2.41298144854057,1.06839362200353,1.46598263418218,7.09371528781903,2.65490276679926,1.21390318077491,4.23252979750651,3.20628635585027,3.54362271456927,2.45948118355142,3.87642439752332,3.63533729477506,3.92147116223193,5.05658812697306,3.16255825724996,4.12542172992747,1.02131881726136,1.8006109403131,2.97524972700335,1.50035924522115,1.77340233642274,1.42695054081656,0.164549020602121,1.8267896946876,2.3467170806371,0.21183207086382,0.882113592219848,1.6488625294148,1.61464426695906,2.41251699712623,2.02932984805332,1.31312719796049,7.57850175237612,2.03967832211561,46.9894922194095,16.5109494370578,25.5568447770202,36.1667437449007,49.6200046627321,53.7628707035328,19.3775410192995,22.5321838241089,20.5917960968591,0.954670618015114,1.42351197111511,3.25311147402958,2.59212817972323,2.09088296014469,1.74690050996942,1.75323650300267,3.2234847732881,2.09404753587224,2.59229946583586,11.8054469486516,0,3.43888055901151,1.82004339502807,2.33341426012857,1.80823752868824,3.21016638432478,2.46450201156083,2.73429208172295,0.734015410979976,0.724752362478018,0.288030006257865,92.2752472234281,9.52808511863772,15.2012216603944,26.7636895334258,53.170928613242,58.8096810152544,82.4540783706986,78.7185179840497,88.1437108047329,79.0264585012348,101.330316062525,106.813837290769,106.217873170924,109.279903539767,0.453460767230423,0.221985953374065,0.358855426437903,1.00730769818447,3.28422309854724,4.50437941082837,4.39563898241436,2.57242054894879,4.01257683228291,2.25900737046827,1.38097570952153,1.14579102687879,1.71853182343688,0,0.755393897389701,0,0.45032120322422,1.81256963593682,1.55328093525546,0.830298780673413,0.798049746802062,1.87806966329548,3.8897074730927,2.51535795153579,3.30918315210025,4.4449345560323,4.94484137373346,2.56735367673452,2.52697211763797,3.29523089857312,3.39527414494937,3.46473577638565,4.1616349063165,3.0440798546475,3.33405583898152,3.59241410429052,3.8581844092741,0.412085900803307,3.97437084362873,3.77156177623957,3.01708870470874,3.57654284920981,3.0522747492789,3.85848459702856,2.96151127620868,3.65855945745545,1.57841826862706,2.8518863907631,2.80571135828869,4.1522256343461,3.25064791839359,2.45538625901814,4.02835787083512,5.20847849649082,1.74867404556562,6.78401664491684,4.29742108096597,1.72159498861959,6.17655973534643,7.41977073985349 | |phase1_expression=1.28119077683835,5.93258192986914,5.45999087267443,3.0246421130683,6.51164448930251,4.53274034162102,3.73780224952841,185.808462432428,22.80777298857,31.1305820008251,6.67750076079469,5.50427897067821,178.562361318248,217.764222425723,27.3150004688843,32.8009933171518,9.79386629379405,143.535285237998,143.695926418814,129.014454146601,5.95303031057488,37.3333976515329,39.1799683708403,16.1592347021341,13.7645568640302,2.29692785646008,3.87685796543167,5.817723282519,2.09025761402011,3.02436155711917,4.21287970245079,1.27006134691926,1.23012957516914,0,0.577703239502549,0.997407872150954,0.408338712524738,236.051839735616,123.45098443476,190.562642806463,244.704299020902,201.498418062741,217.023127804926,0,0,0,0,1.96222640742402,4.83309602015838,1.36100929351998,0.419959264876088,0,128.689258846284,129.839823420031,115.95236070415,0,1.71920063963254,1.03134418455488,0.202316460859598,1.05798195854407,1.26766280701236,0,0,39.1456377017409,51.4210508534827,41.2078466668738,23.9680088414724,11.5265491596466,0.933206510776299,0.540023753326763,0,1.99955689082663,1.98781686856452,0.244981598429908,0.670918297127655,0,1.10115880999389,1.14918604276669,1.84327839907492,0.527545150920775,0.457438218012048,0,1.3959149950069,1.68828783009504,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,1.13589289999776,0.302286240427142,0.579728977403356,6.0229671388697,0,0.539703191637817,1.94932925234301,2.24013443548668,9.26933172869562,0,0,0,0.563373679106722,0,0,0,0,0,0,8.90634261808668,110.048600550048,3.56261133755579,0.867426633830679,1.52232739156071,1.15307748628029,1.3565037649736,1.76383060703557,1.88499886994513,0,5.20557684911682,74.3072863637894,7.117741397686,22.7466764014205,17.9403843660032,1.86391761218122,0.585561594023094,0.41889341362691,5.36459815938042,10.9031763300387,7.7987355029143,11.4363204365758,1.3481157546434,0,0.251308704225729,0.695297280769106,0.255715457330331,0.62336413367868,1.62241263067758,2.13862664085664,20.7759640918855,2.0217820674694,1.47309299120532,2.08192708740326,2.06911893990126,0.540186389416048,1.50704817835715,0.884474488967262,0.768682321709099,0.749613796477831,0.517406741478031,0.862271971731369,1.70195472151037,1.05570674498369,1.97276159184817,2.22437799380478,2.78601733217733,1.85203922767149,2.9855140022774,10.5331978096985,11.8380037272769,14.7765019685708,0.414251545071004,1.87620847984877,0.720248245844059,0.473489471170421,1.37734962223183,0.925602677324269,0.465067889500816,0.536546802799238,1.05088808130453,1.15191894939436,1.97000956894914,1.54030738137126,4.23979963533464,2.85415149878366,2.54992195644706,0.420579897128254,0.308713837137853,7.93005079161115,2.90895623329899,2.34617075588757,2.09013004674395,2.96395161040815,4.84040459096022,7.56085349072559,6.46767128782701,5.69434873853414,3.78807595865225,6.28338022000674,4.77495532898762,5.45899443933536,7.19055526923377,3.45820879799511,4.18196673834171,1.51734320762465,1.14248512609729,1.1270773567308,1.01825663922657,1.16371492300575,1.33258057791605,2.40298841072178,2.06654207171443,3.767969468193,2.59134044235781,5.63259991465583,4.50481785433454,6.2898878436225,11.0182435068578,8.52012509831712,17.364755502174,11.7127891819453,16.1109836972454,11.5116011010275,13.1789478330279,14.3768206527355,16.0020607497456,7.48890415474945,5.30415643688935,4.30553792452589,4.82443521363367,16.9972934953276,1.32643988239339,1.46668478797823,2.03694102930226,1.64283173801951,4.52266895092903,2.85652369063216,2.34160377429359,5.04432461139811,4.65075848262427,8.6105575075043,12.7813385478276,13.9874835311375,8.96824163205372,40.7136466636035,75.6028900508006,7.37646409528554,5.51873492609465,0.80275294993896,0.703270119553219,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0.963963949265421,2.41298144854057,1.06839362200353,1.46598263418218,7.09371528781903,2.65490276679926,1.21390318077491,4.23252979750651,3.20628635585027,3.54362271456927,2.45948118355142,3.87642439752332,3.63533729477506,3.92147116223193,5.05658812697306,3.16255825724996,4.12542172992747,1.02131881726136,1.8006109403131,2.97524972700335,1.50035924522115,1.77340233642274,1.42695054081656,0.164549020602121,1.8267896946876,2.3467170806371,0.21183207086382,0.882113592219848,1.6488625294148,1.61464426695906,2.41251699712623,2.02932984805332,1.31312719796049,7.57850175237612,2.03967832211561,46.9894922194095,16.5109494370578,25.5568447770202,36.1667437449007,49.6200046627321,53.7628707035328,19.3775410192995,22.5321838241089,20.5917960968591,0.954670618015114,1.42351197111511,3.25311147402958,2.59212817972323,2.09088296014469,1.74690050996942,1.75323650300267,3.2234847732881,2.09404753587224,2.59229946583586,11.8054469486516,0,3.43888055901151,1.82004339502807,2.33341426012857,1.80823752868824,3.21016638432478,2.46450201156083,2.73429208172295,0.734015410979976,0.724752362478018,0.288030006257865,92.2752472234281,9.52808511863772,15.2012216603944,26.7636895334258,53.170928613242,58.8096810152544,82.4540783706986,78.7185179840497,88.1437108047329,79.0264585012348,101.330316062525,106.813837290769,106.217873170924,109.279903539767,0.453460767230423,0.221985953374065,0.358855426437903,1.00730769818447,3.28422309854724,4.50437941082837,4.39563898241436,2.57242054894879,4.01257683228291,2.25900737046827,1.38097570952153,1.14579102687879,1.71853182343688,0,0.755393897389701,0,0.45032120322422,1.81256963593682,1.55328093525546,0.830298780673413,0.798049746802062,1.87806966329548,3.8897074730927,2.51535795153579,3.30918315210025,4.4449345560323,4.94484137373346,2.56735367673452,2.52697211763797,3.29523089857312,3.39527414494937,3.46473577638565,4.1616349063165,3.0440798546475,3.33405583898152,3.59241410429052,3.8581844092741,0.412085900803307,3.97437084362873,3.77156177623957,3.01708870470874,3.57654284920981,3.0522747492789,3.85848459702856,2.96151127620868,3.65855945745545,1.57841826862706,2.8518863907631,2.80571135828869,4.1522256343461,3.25064791839359,2.45538625901814,4.02835787083512,5.20847849649082,1.74867404556562,6.78401664491684,4.29742108096597,1.72159498861959,6.17655973534643,7.41977073985349 | ||
|short_description=p2@Arhgap4 | |short_description=p2@Arhgap4 | ||
}} | }} |
Revision as of 19:56, 14 November 2012
Short description: | p2@Arhgap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000114406, ENSMUST00000114408, ENSMUST00000123283, ENSMUST00000149135, NM_001162423, NM_001162424, NM_138630, uc009tna.2, uc009tnb.2, uc009tnc.2, uc009tnd.2, uc009tne.2, uc009tnf.2, uc012hkj.1, uc012hkk.1, uc012hkl.1_5end |
EntrezGene: | Arhgap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.14e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.14e-11 | 32 |
hematopoietic stem cell | 4.14e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.14e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.65e-09 | 25 |
leukocyte | 1.10e-08 | 17 |
nongranular leukocyte | 1.10e-08 | 17 |
lymphoid lineage restricted progenitor cell | 2.25e-07 | 12 |
lymphocyte | 6.59e-07 | 13 |
common lymphoid progenitor | 6.59e-07 | 13 |
T cell | 9.43e-07 | 11 |
pro-T cell | 9.43e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.