FFCP PHASE1:Mm9::chr1:53842008..53842033,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:53842008..53842033,- | |id=chr1:53842008..53842033,- | ||
|ontology_enrichment_celltype=CL:0000063!2.83e-09!66;CL:0000988!1.03e-08!32;CL:0002032!1.03e-08!32;CL:0000037!1.03e-08!32;CL:0000566!1.03e-08!32;CL:0000837!1.03e-08!32;CL:0000838!7.25e-08!12;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0002031!3.67e-07!25 | |ontology_enrichment_celltype=CL:0000063!2.83e-09!66;CL:0000988!1.03e-08!32;CL:0002032!1.03e-08!32;CL:0000037!1.03e-08!32;CL:0000566!1.03e-08!32;CL:0000837!1.03e-08!32;CL:0000838!7.25e-08!12;CL:0000084!3.57e-07!11;CL:0000827!3.57e-07!11;CL:0002031!3.67e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.01e-08,32;CL:0002032,1.01e-08,32;CL:0000037,1.01e-08,32;CL:0000837,1.01e-08,32;CL:0000838,7.25e-08,12;CL:0000084,3.57e-07,11;CL:0000827,3.57e-07,11;CL:0002031,3.61e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.43e-13!48;UBERON:0002390!1.12e-11!45;UBERON:0003061!1.12e-11!45;UBERON:0002405!1.97e-10!70;UBERON:0004119!9.69e-10!130;UBERON:0000925!9.69e-10!130;UBERON:0006595!9.69e-10!130;UBERON:0001007!1.50e-09!128;UBERON:0001555!1.50e-09!128;UBERON:0007026!1.50e-09!128;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0004923!2.16e-08!24;UBERON:0004177!2.65e-08!29;UBERON:0003081!6.51e-08!88;UBERON:0000344!2.71e-07!15;UBERON:0003929!9.40e-07!55 | |ontology_enrichment_uberon=UBERON:0002193!2.43e-13!48;UBERON:0002390!1.12e-11!45;UBERON:0003061!1.12e-11!45;UBERON:0002405!1.97e-10!70;UBERON:0004119!9.69e-10!130;UBERON:0000925!9.69e-10!130;UBERON:0006595!9.69e-10!130;UBERON:0001007!1.50e-09!128;UBERON:0001555!1.50e-09!128;UBERON:0007026!1.50e-09!128;UBERON:0004921!9.49e-09!126;UBERON:0004185!9.49e-09!126;UBERON:0004923!2.16e-08!24;UBERON:0004177!2.65e-08!29;UBERON:0003081!6.51e-08!88;UBERON:0000344!2.71e-07!15;UBERON:0003929!9.40e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.43e-13,48;UBERON:0002405,2.43e-13,48;UBERON:0002390,1.12e-11,45;UBERON:0003061,1.12e-11,45;UBERON:0004119,1.26e-11,118;UBERON:0000925,1.26e-11,118;UBERON:0006595,1.26e-11,118;UBERON:0001007,1.96e-11,116;UBERON:0001555,1.96e-11,116;UBERON:0007026,1.96e-11,116;UBERON:0004921,1.52e-10,114;UBERON:0000077,9.97e-09,35;UBERON:0004923,2.16e-08,24;UBERON:0004177,2.65e-08,29;UBERON:0005057,2.65e-08,29;UBERON:0003081,1.66e-07,87;UBERON:0000344,2.71e-07,15;UBERON:0003929,9.40e-07,55 | |||
|phase1_expression=7.20669811971573,181.467211972468,215.66963947064,146.090214061199,157.782154933099,61.2759342478398,48.8250418844649,145.521985518656,419.691180734119,373.098854957258,53.9336599910341,35.817699388906,297.718069350367,223.359128180538,100.59914806833,139.91040976637,104.234719841094,415.621402859478,483.054149593018,510.965140764828,18.8796104135375,134.241366023597,113.883108064576,183.191324098451,193.621433220692,138.38990335172,140.428410747858,107.304673877573,122.755128968818,101.568142293252,101.109112858819,13.3356441426523,7.38077745101484,0,27.7297554961224,17.4546377626417,21.6419517638111,838.737387996763,534.43337565428,513.053269094322,1238.22728230529,1071.6983658998,618.54018976169,17.877348152532,14.2941473019516,7.52541683862894,12.5182615095686,1.52617609466313,5.05278220289285,6.80504646759992,7.8392396110203,5.75010257459886,1360.8847177343,617.283182851654,573.376021337044,9.26133969729409,11.747871037489,17.532851137433,1.21389876515759,1.05798195854407,0,2.71075625655306,1.77858959222228,16.6481447697059,24.7216590641744,27.7087244828979,8.38880309451533,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.57085885963423,3.75476519617743,2.20483438586917,1.43768206527355,0.919218786610021,2.20231761998777,4.46905683298157,2.4577045320999,1.05509030184155,0.823388792421687,1.56274011167028,5.02529398202486,2.25105044012672,1.98637722109853,5.89257170947335,4.9830088279686,3.72798891650601,34.985501319931,25.9210451166274,20.8702431865208,11.185510400758,23.7989966797713,2.69851595818909,5.84798775702902,5.37632264516803,28.5102172867456,45.5048961283414,35.8504686351959,25.4404493647445,3.23939865486365,44.9142670950112,30.5766287647975,7.11066703153331,16.6698101578635,15.9616715249312,13.6491600153991,43.846609812119,381.933378379578,13.9535610720935,5.55153045651635,7.00270600117925,6.22661842591358,5.12456977878917,9.64227398512779,9.04799457573663,6.67426412882809,37.1620347284173,91.1148868508371,23.4561932423743,42.4015715443956,44.1236480353052,39.1422698558057,35.4264764383972,39.1665341741161,81.4908006115406,202.008299916982,96.5843396899386,129.35749116038,1.64769703345305,5.49000723382352,1.7591609295801,7.47444576826789,8.18289463457058,1.66230435647648,5.19172041816825,8.86002465497752,62.3278922756566,11.3725241295154,12.416069497302,4.68433594665733,5.9774547152703,7.02242306240862,9.0422890701429,11.7022778540284,13.3238269096244,9.37017245597288,13.9699820199068,3.01795190105979,7.18603104637713,7.5658983390498,6.1374805079721,7.50727572909114,19.5021213252413,15.4336602305958,5.7719937377363,58.2836945469985,49.9254939802547,66.7784223579643,11.1847917169171,9.14651633926275,10.9837857491219,10.180023630164,9.44468312387538,12.1871019181029,12.3242990717716,13.413670069981,10.7424114977796,7.5697530960201,10.5067177010621,13.2952847655203,16.0819986167866,16.0271584162467,13.8232611323183,4.41608891984667,4.52780294468852,134.480444674406,87.0042364323061,3.41261200856374,5.10920678092965,7.34544529535932,9.27744213267376,8.2279876222602,9.51128130562796,76.8737079702109,18.2815839743652,14.3261069016154,20.2935601481974,16.9618755793635,79.9949273702257,65.9221052117817,81.8470633075449,2.65535061334314,7.76889885746156,6.76246414038483,8.96065842519383,8.53390943537553,7.5746685481544,11.1296305338693,7.97094799089852,7.53593893638599,9.62497878590044,10.3758419480502,12.6802280344231,15.7247196090562,17.5392447660186,23.1260538382893,26.7706647325183,25.9718368817048,23.5910832709665,26.2659067375557,13.1789478330279,12.9391385874619,18.9791883310937,16.2259590019572,8.84026072814891,9.68746033018326,9.16642690590398,55.9802166204812,8.90609635321278,7.49638891633319,7.97801903143384,6.57132695207806,8.5428191295326,12.1402256851867,20.4890330250689,25.2216230569906,17.2742457926044,19.7723913135284,35.8860659227466,35.4004212825086,29.3637588920468,36.1899081454253,25.5635671394793,28.5223278351041,24.5583704211212,2.40825884981688,2.69586879162067,8.36068221421045,17.1680230498974,6.31016438832513,8.19921363022941,5.60100834105277,5.01834475700359,10.6943363559549,8.20921939287614,7.69140333182299,9.05993159525067,12.2539211163422,6.10510501201433,12.7746076687442,3.5613120733451,9.12166972380026,20.2913251256219,18.5843193675948,3.39892890616974,5.44182402536552,8.86443874852721,5.02013217897314,10.4527950300935,11.8877014857382,10.5424781548477,11.7644134866958,14.8537276229834,9.48767477174989,21.6584640821192,5.44703369206061,4.32146625675145,2.19909762430683,5.35842587578981,9.22169214939823,7.66985915688903,7.24015690649332,5.17590413494819,19.9470951854154,16.522901527378,31.5355609218596,28.1955492529931,20.8289110437718,24.6679862956157,43.0934161851323,36.4392797434036,74.0361325039821,4.07935664423121,98.7633691011589,27.862227175035,54.8175801014347,61.596485440534,70.1241388208859,92.6551601486417,150.430910544562,206.848246534367,131.289975114203,17.184071124272,6.01038387804157,7.9294592179471,9.50446999231851,9.19988502463662,8.95286511359328,19.9599232649535,27.0276800221848,23.0345228945946,50.9386845036746,29.2029477150855,15.2197093444731,12.1108402295623,8.27292452285488,7.19469396872976,9.29950729039664,10.644235905919,13.6134396829075,8.07267186032491,11.0102311646996,25.8495009283826,26.2107305694658,77.7387356745319,9.12263468805739,9.96296284498824,17.4093902790245,22.0202835671002,32.1863794745649,45.5540753680682,49.1806125491342,51.997721723296,40.5420211404599,51.3205282346518,74.2629051236913,72.6399404384487,80.528185603101,13.1503622496823,9.10142408833665,9.41995494399495,14.4380770073107,26.8533535704745,23.2726269559466,10.6227942075014,16.0776284309299,54.6713593398546,9.03602948187307,8.74617949363636,17.1868654031819,10.3111909406213,9.59115527678899,5.2877572817279,8.10027000278167,4.05289082901798,9.9691329976525,7.7664046762773,4.56664329370377,4.78829848081237,8.53668028770671,8.265628380322,6.49800804146745,8.64064489715066,13.7792971237001,13.8043488350059,13.1576875932644,12.8875577999537,10.8996098952803,13.9583492625696,14.8889996877113,13.3172317002128,12.9804159839686,17.1465728861907,11.7043169204304,10.4170979050401,13.1867488257058,11.3343168503486,15.4291163573437,11.8908790126756,13.8292990169446,14.9706809131298,14.3987352035456,12.8614203995348,10.9756783723664,11.3119975918272,12.9013908153569,13.4674145197857,6.76219603307793,12.9040871911988,11.867700251921,13.789378865551,11.1885834369062,8.74337022782811,16.8430758080694,17.1896843238639,18.9375448748155,21.6179590737125,32.461496986859 | |phase1_expression=7.20669811971573,181.467211972468,215.66963947064,146.090214061199,157.782154933099,61.2759342478398,48.8250418844649,145.521985518656,419.691180734119,373.098854957258,53.9336599910341,35.817699388906,297.718069350367,223.359128180538,100.59914806833,139.91040976637,104.234719841094,415.621402859478,483.054149593018,510.965140764828,18.8796104135375,134.241366023597,113.883108064576,183.191324098451,193.621433220692,138.38990335172,140.428410747858,107.304673877573,122.755128968818,101.568142293252,101.109112858819,13.3356441426523,7.38077745101484,0,27.7297554961224,17.4546377626417,21.6419517638111,838.737387996763,534.43337565428,513.053269094322,1238.22728230529,1071.6983658998,618.54018976169,17.877348152532,14.2941473019516,7.52541683862894,12.5182615095686,1.52617609466313,5.05278220289285,6.80504646759992,7.8392396110203,5.75010257459886,1360.8847177343,617.283182851654,573.376021337044,9.26133969729409,11.747871037489,17.532851137433,1.21389876515759,1.05798195854407,0,2.71075625655306,1.77858959222228,16.6481447697059,24.7216590641744,27.7087244828979,8.38880309451533,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.57085885963423,3.75476519617743,2.20483438586917,1.43768206527355,0.919218786610021,2.20231761998777,4.46905683298157,2.4577045320999,1.05509030184155,0.823388792421687,1.56274011167028,5.02529398202486,2.25105044012672,1.98637722109853,5.89257170947335,4.9830088279686,3.72798891650601,34.985501319931,25.9210451166274,20.8702431865208,11.185510400758,23.7989966797713,2.69851595818909,5.84798775702902,5.37632264516803,28.5102172867456,45.5048961283414,35.8504686351959,25.4404493647445,3.23939865486365,44.9142670950112,30.5766287647975,7.11066703153331,16.6698101578635,15.9616715249312,13.6491600153991,43.846609812119,381.933378379578,13.9535610720935,5.55153045651635,7.00270600117925,6.22661842591358,5.12456977878917,9.64227398512779,9.04799457573663,6.67426412882809,37.1620347284173,91.1148868508371,23.4561932423743,42.4015715443956,44.1236480353052,39.1422698558057,35.4264764383972,39.1665341741161,81.4908006115406,202.008299916982,96.5843396899386,129.35749116038,1.64769703345305,5.49000723382352,1.7591609295801,7.47444576826789,8.18289463457058,1.66230435647648,5.19172041816825,8.86002465497752,62.3278922756566,11.3725241295154,12.416069497302,4.68433594665733,5.9774547152703,7.02242306240862,9.0422890701429,11.7022778540284,13.3238269096244,9.37017245597288,13.9699820199068,3.01795190105979,7.18603104637713,7.5658983390498,6.1374805079721,7.50727572909114,19.5021213252413,15.4336602305958,5.7719937377363,58.2836945469985,49.9254939802547,66.7784223579643,11.1847917169171,9.14651633926275,10.9837857491219,10.180023630164,9.44468312387538,12.1871019181029,12.3242990717716,13.413670069981,10.7424114977796,7.5697530960201,10.5067177010621,13.2952847655203,16.0819986167866,16.0271584162467,13.8232611323183,4.41608891984667,4.52780294468852,134.480444674406,87.0042364323061,3.41261200856374,5.10920678092965,7.34544529535932,9.27744213267376,8.2279876222602,9.51128130562796,76.8737079702109,18.2815839743652,14.3261069016154,20.2935601481974,16.9618755793635,79.9949273702257,65.9221052117817,81.8470633075449,2.65535061334314,7.76889885746156,6.76246414038483,8.96065842519383,8.53390943537553,7.5746685481544,11.1296305338693,7.97094799089852,7.53593893638599,9.62497878590044,10.3758419480502,12.6802280344231,15.7247196090562,17.5392447660186,23.1260538382893,26.7706647325183,25.9718368817048,23.5910832709665,26.2659067375557,13.1789478330279,12.9391385874619,18.9791883310937,16.2259590019572,8.84026072814891,9.68746033018326,9.16642690590398,55.9802166204812,8.90609635321278,7.49638891633319,7.97801903143384,6.57132695207806,8.5428191295326,12.1402256851867,20.4890330250689,25.2216230569906,17.2742457926044,19.7723913135284,35.8860659227466,35.4004212825086,29.3637588920468,36.1899081454253,25.5635671394793,28.5223278351041,24.5583704211212,2.40825884981688,2.69586879162067,8.36068221421045,17.1680230498974,6.31016438832513,8.19921363022941,5.60100834105277,5.01834475700359,10.6943363559549,8.20921939287614,7.69140333182299,9.05993159525067,12.2539211163422,6.10510501201433,12.7746076687442,3.5613120733451,9.12166972380026,20.2913251256219,18.5843193675948,3.39892890616974,5.44182402536552,8.86443874852721,5.02013217897314,10.4527950300935,11.8877014857382,10.5424781548477,11.7644134866958,14.8537276229834,9.48767477174989,21.6584640821192,5.44703369206061,4.32146625675145,2.19909762430683,5.35842587578981,9.22169214939823,7.66985915688903,7.24015690649332,5.17590413494819,19.9470951854154,16.522901527378,31.5355609218596,28.1955492529931,20.8289110437718,24.6679862956157,43.0934161851323,36.4392797434036,74.0361325039821,4.07935664423121,98.7633691011589,27.862227175035,54.8175801014347,61.596485440534,70.1241388208859,92.6551601486417,150.430910544562,206.848246534367,131.289975114203,17.184071124272,6.01038387804157,7.9294592179471,9.50446999231851,9.19988502463662,8.95286511359328,19.9599232649535,27.0276800221848,23.0345228945946,50.9386845036746,29.2029477150855,15.2197093444731,12.1108402295623,8.27292452285488,7.19469396872976,9.29950729039664,10.644235905919,13.6134396829075,8.07267186032491,11.0102311646996,25.8495009283826,26.2107305694658,77.7387356745319,9.12263468805739,9.96296284498824,17.4093902790245,22.0202835671002,32.1863794745649,45.5540753680682,49.1806125491342,51.997721723296,40.5420211404599,51.3205282346518,74.2629051236913,72.6399404384487,80.528185603101,13.1503622496823,9.10142408833665,9.41995494399495,14.4380770073107,26.8533535704745,23.2726269559466,10.6227942075014,16.0776284309299,54.6713593398546,9.03602948187307,8.74617949363636,17.1868654031819,10.3111909406213,9.59115527678899,5.2877572817279,8.10027000278167,4.05289082901798,9.9691329976525,7.7664046762773,4.56664329370377,4.78829848081237,8.53668028770671,8.265628380322,6.49800804146745,8.64064489715066,13.7792971237001,13.8043488350059,13.1576875932644,12.8875577999537,10.8996098952803,13.9583492625696,14.8889996877113,13.3172317002128,12.9804159839686,17.1465728861907,11.7043169204304,10.4170979050401,13.1867488257058,11.3343168503486,15.4291163573437,11.8908790126756,13.8292990169446,14.9706809131298,14.3987352035456,12.8614203995348,10.9756783723664,11.3119975918272,12.9013908153569,13.4674145197857,6.76219603307793,12.9040871911988,11.867700251921,13.789378865551,11.1885834369062,8.74337022782811,16.8430758080694,17.1896843238639,18.9375448748155,21.6179590737125,32.461496986859 | ||
|short_description=p1@Stk17b | |short_description=p1@Stk17b | ||
}} | }} |
Revision as of 23:23, 14 November 2012
Short description: | p1@Stk17b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stk17b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1272 |
Association with transcript: | 25bp_to_NM_133810, uc007azj.2_5end |
EntrezGene: | Stk17b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.01e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.01e-08 | 32 |
hematopoietic stem cell | 1.01e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.01e-08 | 32 |
lymphoid lineage restricted progenitor cell | 7.25e-08 | 12 |
T cell | 3.57e-07 | 11 |
pro-T cell | 3.57e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 3.61e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.43e-13 | 48 |
immune system | 2.43e-13 | 48 |
hematopoietic system | 1.12e-11 | 45 |
blood island | 1.12e-11 | 45 |
endoderm-derived structure | 1.26e-11 | 118 |
endoderm | 1.26e-11 | 118 |
presumptive endoderm | 1.26e-11 | 118 |
digestive system | 1.96e-11 | 116 |
digestive tract | 1.96e-11 | 116 |
primitive gut | 1.96e-11 | 116 |
subdivision of digestive tract | 1.52e-10 | 114 |
mixed endoderm/mesoderm-derived structure | 9.97e-09 | 35 |
organ component layer | 2.16e-08 | 24 |
hemopoietic organ | 2.65e-08 | 29 |
immune organ | 2.65e-08 | 29 |
lateral plate mesoderm | 1.66e-07 | 87 |
mucosa | 2.71e-07 | 15 |
gut epithelium | 9.40e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.