FFCP PHASE1:Mm9::chr1:108693264..108693290,-: Difference between revisions
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|id=chr1:108693264..108693290,- | |id=chr1:108693264..108693290,- | ||
|ontology_enrichment_celltype=CL:0000066!9.52e-07!25 | |ontology_enrichment_celltype=CL:0000066!9.52e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.82e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.34e-14!130;UBERON:0000925!3.34e-14!130;UBERON:0006595!3.34e-14!130;UBERON:0000160!5.15e-14!43;UBERON:0001007!1.41e-13!128;UBERON:0001555!1.41e-13!128;UBERON:0007026!1.41e-13!128;UBERON:0007023!2.72e-13!51;UBERON:0004921!1.03e-12!126;UBERON:0004185!1.03e-12!126;UBERON:0005409!4.50e-12!59;UBERON:0000344!1.10e-08!15;UBERON:0001242!9.58e-08!13;UBERON:0000060!9.58e-08!13;UBERON:0001262!9.58e-08!13;UBERON:0004786!9.58e-08!13 | |ontology_enrichment_uberon=UBERON:0004119!3.34e-14!130;UBERON:0000925!3.34e-14!130;UBERON:0006595!3.34e-14!130;UBERON:0000160!5.15e-14!43;UBERON:0001007!1.41e-13!128;UBERON:0001555!1.41e-13!128;UBERON:0007026!1.41e-13!128;UBERON:0007023!2.72e-13!51;UBERON:0004921!1.03e-12!126;UBERON:0004185!1.03e-12!126;UBERON:0005409!4.50e-12!59;UBERON:0000344!1.10e-08!15;UBERON:0001242!9.58e-08!13;UBERON:0000060!9.58e-08!13;UBERON:0001262!9.58e-08!13;UBERON:0004786!9.58e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.62e-13,51;UBERON:0000160,6.66e-13,31;UBERON:0004119,4.71e-12,118;UBERON:0000925,4.71e-12,118;UBERON:0006595,4.71e-12,118;UBERON:0001007,1.78e-11,116;UBERON:0001555,1.78e-11,116;UBERON:0007026,1.78e-11,116;UBERON:0004921,1.12e-10,114;UBERON:0005409,2.17e-10,47;UBERON:0000344,1.07e-08,15;UBERON:0001242,9.39e-08,13;UBERON:0001262,9.39e-08,13;UBERON:0004786,9.39e-08,13 | |||
|phase1_expression=2.40223270657191,18.4956966048861,20.4749657725291,19.0552453123303,14.5259761684441,6.5472916045637,5.60670337429262,2.96983643915625,1.54867594366833,2.34064526321993,4.28044920563762,3.11111420081812,2.9104124088305,2.27293046289393,2.33176833270964,2.02475267389826,2.09868563438444,1.57731082679119,2.33094537129756,0.84877930359606,3.06155844543851,1.88652807281682,1.30599894569468,7.99962113967033,8.94696196161963,8.6134794617253,13.7843838770904,13.3592164265251,14.251756459228,12.6015064879965,10.8647950221099,0.635030673459631,0,15.8481681015439,6.64358725427932,4.15586613396231,5.3084032628216,8.37063261473815,4.6880120671428,7.85285615960697,7.05877785637217,12.294818729252,14.0798002379035,2.7697299954627,2.63580021170738,3.48738829107195,0,0.218025156380447,1.09843091367236,1.36100929351998,1.1198913730029,0,2.18117387875057,2.17608642603403,0.672187598284928,1.02903774414379,1.43266719969378,2.06268836910977,0.809265843438391,1.5869729378161,0,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,0.299600110518405,0.768436610643109,0.622137673850866,0.540023753326763,0.841299845405528,0.285650984403804,1.10434270475807,1.46988959057945,1.43768206527355,0.919218786610021,2.20231761998777,3.31987079021488,3.99376986466233,1.18697658957174,0.731901148819277,1.04182674111352,3.62937898701795,3.93933827022176,3.0559649555362,2.06240009831567,0.711858403995515,1.3047961207771,2.27178579999552,2.34271836331035,2.31891590961342,9.46466264679525,3.39985666853875,5.39703191637817,6.49776417447669,11.6486990645307,6.46044332606059,2.04516387093669,2.07828803682295,2.47337702157238,2.39433813620357,3.84979432242953,0,7.11066703153331,4.97929394325792,5.06719730950197,4.54972000513305,5.93756174539112,2.33044095282455,4.89859058913922,1.56136794089522,1.82679286987285,3.68984795609694,3.46662073271032,4.46837087115678,4.02133092254962,6.67426412882809,4.19338135067744,4.42305275974937,2.26473589926373,1.54589062922275,1.93950101254089,24.2309289583559,3.51336956413857,3.97948742945565,16.0937944781413,0.958520996047362,1.79970819298022,0.889491589511453,4.94309110035915,3.66000482254901,2.1361239859187,3.12883776346098,2.81287003063364,3.32460871295296,4.2182728397617,2.74966282395854,3.4833951770826,3.79084137650512,12.2056276414155,1.56144531555244,1.14951052216736,1.62055916824814,1.65775299619287,3.06164246180975,2.17793324484245,2.71735001223214,7.76110112217047,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,0.556094498451196,3.83077383174383,4.11564272815887,1.59227413454795,0.702213187313235,0.772043721344145,0.284163499395593,2.07125772535502,2.34526059981096,0.900310307305074,1.18372367792605,1.37734962223183,1.3884040159864,0.930135779001631,1.07309360559848,2.80236821681207,1.48103864922132,2.46251196118643,2.83740833410495,3.07019973593198,3.29325172936576,1.20785776884335,3.15434922846191,2.16099685996497,25.7726650727362,12.9580777665137,1.91959425481711,1.16118335930219,2.96395161040815,3.83198696784351,4.89231696458715,4.37518940058886,19.455691523325,8.07024878147653,9.55073793441024,9.74886713001639,11.307917052909,14.3811105384675,18.1555961894743,10.1562049359727,0.758671603812327,1.94222471436539,3.38123207019241,2.03651327845314,1.35766741017338,2.66516115583211,2.21327879934901,3.83786384746966,4.55296310739987,3.08492909804501,8.30067355844017,2.16898637430922,1.76903095601883,2.69834534861824,3.24576194221605,3.13530307678142,4.32863948028414,2.5892652370573,3.56697498905078,5.76578967694971,2.87536413054709,5.20997326735905,2.18426371180192,6.31447194867779,10.4050499842709,5.78932225636041,3.14080423283228,0.37898282354097,1.46668478797823,0.848725428875941,1.17345124144251,3.01511263395268,3.09456733151818,3.90267295715598,3.31033802623001,2.21464689648775,3.02964060449226,3.11340297959902,2.41758974612254,2.60368305446721,1.50791283939272,2.17562273527484,10.8188140064188,8.82997588175144,4.65596710964597,3.98519734413491,2.62295912602681,2.27223834483936,1.26203287766503,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,2.54768877709949,0.404810701674894,2.04579100537918,1.18586333383957,2.24924921495265,4.25820255624806,2.49291845134157,2.44330439030364,4.45419332025846,5.30980553359851,1.21390318077491,1.51161778482376,5.28094223316515,5.02013217897314,5.84126781093462,7.49442050187841,3.63533729477506,5.34746067577082,8.21695570633122,9.48767477174989,3.09406629744561,5.10659408630682,0.900305470156551,0.776152102696527,1.71469628025274,2.30542303734956,2.31879462882692,2.30368628842969,0.913394847343798,4.92810586933792,5.71946591332314,7.93902232997863,9.39851641766436,7.42736362801165,6.93598636673792,7.63983001620073,7.05805868903763,17.7803310344209,5.7481843623258,1.02522528478712,2.47664241555867,0.740778109478847,2.63715839806567,1.36694227721025,2.28778173206523,1.35982743995084,2.09927178485487,1.38199973804424,5.72802370809068,1.89801596148681,2.43983360552218,3.0241495430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| |phase1_expression=2.40223270657191,18.4956966048861,20.4749657725291,19.0552453123303,14.5259761684441,6.5472916045637,5.60670337429262,2.96983643915625,1.54867594366833,2.34064526321993,4.28044920563762,3.11111420081812,2.9104124088305,2.27293046289393,2.33176833270964,2.02475267389826,2.09868563438444,1.57731082679119,2.33094537129756,0.84877930359606,3.06155844543851,1.88652807281682,1.30599894569468,7.99962113967033,8.94696196161963,8.6134794617253,13.7843838770904,13.3592164265251,14.251756459228,12.6015064879965,10.8647950221099,0.635030673459631,0,15.8481681015439,6.64358725427932,4.15586613396231,5.3084032628216,8.37063261473815,4.6880120671428,7.85285615960697,7.05877785637217,12.294818729252,14.0798002379035,2.7697299954627,2.63580021170738,3.48738829107195,0,0.218025156380447,1.09843091367236,1.36100929351998,1.1198913730029,0,2.18117387875057,2.17608642603403,0.672187598284928,1.02903774414379,1.43266719969378,2.06268836910977,0.809265843438391,1.5869729378161,0,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,1.4209602298922,0.299600110518405,0.768436610643109,0.622137673850866,0.540023753326763,0.841299845405528,0.285650984403804,1.10434270475807,1.46988959057945,1.43768206527355,0.919218786610021,2.20231761998777,3.31987079021488,3.99376986466233,1.18697658957174,0.731901148819277,1.04182674111352,3.62937898701795,3.93933827022176,3.0559649555362,2.06240009831567,0.711858403995515,1.3047961207771,2.27178579999552,2.34271836331035,2.31891590961342,9.46466264679525,3.39985666853875,5.39703191637817,6.49776417447669,11.6486990645307,6.46044332606059,2.04516387093669,2.07828803682295,2.47337702157238,2.39433813620357,3.84979432242953,0,7.11066703153331,4.97929394325792,5.06719730950197,4.54972000513305,5.93756174539112,2.33044095282455,4.89859058913922,1.56136794089522,1.82679286987285,3.68984795609694,3.46662073271032,4.46837087115678,4.02133092254962,6.67426412882809,4.19338135067744,4.42305275974937,2.26473589926373,1.54589062922275,1.93950101254089,24.2309289583559,3.51336956413857,3.97948742945565,16.0937944781413,0.958520996047362,1.79970819298022,0.889491589511453,4.94309110035915,3.66000482254901,2.1361239859187,3.12883776346098,2.81287003063364,3.32460871295296,4.2182728397617,2.74966282395854,3.4833951770826,3.79084137650512,12.2056276414155,1.56144531555244,1.14951052216736,1.62055916824814,1.65775299619287,3.06164246180975,2.17793324484245,2.71735001223214,7.76110112217047,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,0.556094498451196,3.83077383174383,4.11564272815887,1.59227413454795,0.702213187313235,0.772043721344145,0.284163499395593,2.07125772535502,2.34526059981096,0.900310307305074,1.18372367792605,1.37734962223183,1.3884040159864,0.930135779001631,1.07309360559848,2.80236821681207,1.48103864922132,2.46251196118643,2.83740833410495,3.07019973593198,3.29325172936576,1.20785776884335,3.15434922846191,2.16099685996497,25.7726650727362,12.9580777665137,1.91959425481711,1.16118335930219,2.96395161040815,3.83198696784351,4.89231696458715,4.37518940058886,19.455691523325,8.07024878147653,9.55073793441024,9.74886713001639,11.307917052909,14.3811105384675,18.1555961894743,10.1562049359727,0.758671603812327,1.94222471436539,3.38123207019241,2.03651327845314,1.35766741017338,2.66516115583211,2.21327879934901,3.83786384746966,4.55296310739987,3.08492909804501,8.30067355844017,2.16898637430922,1.76903095601883,2.69834534861824,3.24576194221605,3.13530307678142,4.32863948028414,2.5892652370573,3.56697498905078,5.76578967694971,2.87536413054709,5.20997326735905,2.18426371180192,6.31447194867779,10.4050499842709,5.78932225636041,3.14080423283228,0.37898282354097,1.46668478797823,0.848725428875941,1.17345124144251,3.01511263395268,3.09456733151818,3.90267295715598,3.31033802623001,2.21464689648775,3.02964060449226,3.11340297959902,2.41758974612254,2.60368305446721,1.50791283939272,2.17562273527484,10.8188140064188,8.82997588175144,4.65596710964597,3.98519734413491,2.62295912602681,2.27223834483936,1.26203287766503,0.780877488593277,1.72338718186239,0.716906393857656,0.891194696329576,2.54768877709949,0.404810701674894,2.04579100537918,1.18586333383957,2.24924921495265,4.25820255624806,2.49291845134157,2.44330439030364,4.45419332025846,5.30980553359851,1.21390318077491,1.51161778482376,5.28094223316515,5.02013217897314,5.84126781093462,7.49442050187841,3.63533729477506,5.34746067577082,8.21695570633122,9.48767477174989,3.09406629744561,5.10659408630682,0.900305470156551,0.776152102696527,1.71469628025274,2.30542303734956,2.31879462882692,2.30368628842969,0.913394847343798,4.92810586933792,5.71946591332314,7.93902232997863,9.39851641766436,7.42736362801165,6.93598636673792,7.63983001620073,7.05805868903763,17.7803310344209,5.7481843623258,1.02522528478712,2.47664241555867,0.740778109478847,2.63715839806567,1.36694227721025,2.28778173206523,1.35982743995084,2.09927178485487,1.38199973804424,5.72802370809068,1.89801596148681,2.43983360552218,3.0241495430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| ||
|short_description=p2@Vps4b | |short_description=p2@Vps4b | ||
}} | }} |
Revision as of 02:29, 15 November 2012
Short description: | p2@Vps4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vps4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1960 |
Association with transcript: | 11bp_to_NM_009190, uc007cgz.2_5end |
EntrezGene: | Vps4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.62e-13 | 51 |
intestine | 6.66e-13 | 31 |
endoderm-derived structure | 4.71e-12 | 118 |
endoderm | 4.71e-12 | 118 |
presumptive endoderm | 4.71e-12 | 118 |
digestive system | 1.78e-11 | 116 |
digestive tract | 1.78e-11 | 116 |
primitive gut | 1.78e-11 | 116 |
subdivision of digestive tract | 1.12e-10 | 114 |
gastrointestinal system | 2.17e-10 | 47 |
mucosa | 1.07e-08 | 15 |
intestinal mucosa | 9.39e-08 | 13 |
wall of intestine | 9.39e-08 | 13 |
gastrointestinal system mucosa | 9.39e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.