Personal tools

FFCP PHASE1:Mm9::chr2:129418739..129418767,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr2:129418739..129418767,+
|id=chr2:129418739..129418767,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.27e-08!50;UBERON:0006238!1.27e-08!50;UBERON:0002616!3.40e-08!49;UBERON:0000475!4.49e-08!200;UBERON:0001049!7.67e-08!52;UBERON:0005068!7.67e-08!52;UBERON:0006241!7.67e-08!52;UBERON:0007135!7.67e-08!52;UBERON:0000033!9.53e-08!63;UBERON:0000025!4.91e-07!114;UBERON:0004111!5.30e-07!122
|ontology_enrichment_uberon=UBERON:0000955!1.27e-08!50;UBERON:0006238!1.27e-08!50;UBERON:0002616!3.40e-08!49;UBERON:0000475!4.49e-08!200;UBERON:0001049!7.67e-08!52;UBERON:0005068!7.67e-08!52;UBERON:0006241!7.67e-08!52;UBERON:0007135!7.67e-08!52;UBERON:0000033!9.53e-08!63;UBERON:0000025!4.91e-07!114;UBERON:0004111!5.30e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-09,54;UBERON:0002204,4.77e-08,32;UBERON:0001049,6.15e-08,52;UBERON:0005068,6.15e-08,52;UBERON:0006241,6.15e-08,52;UBERON:0007135,6.15e-08,52;UBERON:0000955,1.09e-07,47;UBERON:0006238,1.09e-07,47;UBERON:0002616,3.14e-07,46;UBERON:0001016,7.85e-07,75;UBERON:0001017,8.37e-07,73
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,3.33109761815663,0.809901069559304,2.09868563438444,1.89277299214943,1.23402990245165,0.42438965179803,2.21112554392781,0.496454756004426,0.261199789138935,0.799962113967033,1.14704640533585,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,41.8531630736908,22.6587249911902,27.2232346866375,42.940898626264,43.0318655523821,38.3553178894611,1.1330713617802,1.82478476195126,2.20256102594018,3.12956537739216,2.8343270329458,4.83309602015838,6.61061656852564,1.67983705950435,1.43752564364972,0,0.725362142011344,0,1.02903774414379,1.14613375975503,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,35.0960889739746,33.6214563272771,36.9449659771972,14.3808053048834,16.9056054341484,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,1.76694832761291,0.367472397644862,0.479227355091182,0.919218786610021,4.40463523997555,4.46905683298157,3.07213066512487,1.84640802822271,1.46380229763855,0.52091337055676,4.74611098302348,2.25105044012672,3.0559649555362,1.47314292736834,1.85083185038834,0.745597783301202,0.530083353332288,3.02286240427142,5.79728977403356,0.860423876981386,0,0,0,0.448026887097336,1.68533304158102,1.02258193546835,0.779358013808606,1.41335829804136,1.12674735821344,2.56652954828636,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,1.48439043634778,4.40194402200192,1.92974780784272,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,0.705532242814229,1.63366568728578,1.73036477414062,1.3013942122792,12.3845477272982,1.7794353494215,1.54589062922275,2.42437626567611,0,4.09893115816166,6.49284791121711,0.510914110417183,1.07833612055328,1.79970819298022,1.65191295194984,4.49371918214468,5.03250663100489,1.38219787324151,5.56237824615285,4.34716277461562,4.1557608911912,3.56930778749067,1.42575109390443,2.86136032403214,0.505445516867349,1.05220927943237,1.17108398666433,0.919608417733892,0.720248519221397,1.20563854268572,1.02054748726992,0.768682321709099,1.12442069471675,2.58703370739016,0.215567992932842,0,0.879755620819744,1.31517439456545,0.834141747676794,2.089512999133,1.23469281844766,0.59710280045548,0,2.83082697826187,2.55747149456033,0.414251545071004,0,0,0.946978942340841,0.983821158737019,0.462801338662135,0,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.972825714550269,0.877199924551994,1.53685080703735,0.671032093801859,4.41608891984667,0.617427674275707,0,0.264450566663544,0.426576501070468,0,0.902072229254653,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.994782360205754,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,1.13800740571849,0.685491075658373,0,0.610953983535943,0.969762435838129,1.1221731182451,1.64414996523069,2.21415221969403,0.941992367048249,2.34454611451421,0.296452627087149,0.667380422864376,0.196558995113203,0.449724224769707,1.62288097110802,1.92941727801933,0.763877555344259,2.87696137450811,3.56697498905078,2.19649130550465,10.0637744569148,4.09355042435354,2.49630138491648,3.03094653536534,1.61457672169721,1.4473305640901,8.12914036733061,0.568474235311454,0.651859905768103,0,0.938760993154008,0.837531287209079,0.238043640886014,3.90267295715598,2.83743259391144,3.32197034473162,2.55127629851979,4.91589944147214,4.31712454664739,5.49666422609744,28.6503439484617,34.2660580805787,0.491764273019036,1.10374698521893,2.56880943980467,2.22702204525186,0.819674726883377,1.26235463602186,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,4.4984984299053,2.12910127812403,0.35613120733451,1.30309567482861,2.47455184458803,0,0.485561272309963,0.604647113929502,0,0,0.307435147943927,1.80899805217755,0.727067458955011,1.42598951353889,0.632073515871632,0,1.03135543248187,1.70219802876894,0.900305470156551,0.646793418913773,1.07168517515796,1.06404140185364,0.713475270408282,0.164549020602121,1.2178597964584,1.87737366450968,0.21183207086382,0.441056796109924,2.30840754118072,1.77610869365496,1.38719727334758,0.835606408021955,0.984845398470368,0.582961673259701,3.15223013417866,4.10090113914846,3.714963623338,9.4449208958553,2.26042148405629,1.0935538217682,1.60144721244566,0.339956859987711,0.559805809294632,0.414599921413271,0,0.949007980743406,1.01659733563424,0.86404272657441,0.209088296014469,0.218362563746178,1.21377911746339,1.48776220305605,0.523511883968059,0.388844919875379,0.621339313086926,0,0.448549638131936,0.66183396182839,0.972255941720238,0.904118764344118,0.844780627453891,0.938857909166032,0.911430693907651,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.762068066549998,0.403304740547362,0.194915761479505,0.192423683280659,0.584384510907845,0.906921534460845,0,0,0.167884616364078,0.965947970160952,1.68914227906064,2.19781949120718,3.85863082342319,3.51100472824754,1.6942555278512,5.52390283808612,4.58316410751517,6.01486138202907,1.37016503954128,1.5107877947794,2.70009000092722,4.5032120322422,2.71885445390523,3.62432218226274,0.31136204275253,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.551530525350042,0.222246727801615,1.23621034343337,0.962757628775446,0.505394423527595,1.52087579934144,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,1.42888107384922,0.927074607558844,1.15745532278223,2.06042950401653,1.03039244094078,0,1.4198064492747,0.238436189947321,1.0174249164263,0.470546902076653,1.26921911837515,1.64635175585495,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,0.689531376628944,0.409231043169689,0.154936841185966,1.35034627686799,0.749431733813838,1.16965804222704,2.36358159453128,2.86932498103265,1.76473135295612,1.15933917810211
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,3.33109761815663,0.809901069559304,2.09868563438444,1.89277299214943,1.23402990245165,0.42438965179803,2.21112554392781,0.496454756004426,0.261199789138935,0.799962113967033,1.14704640533585,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,41.8531630736908,22.6587249911902,27.2232346866375,42.940898626264,43.0318655523821,38.3553178894611,1.1330713617802,1.82478476195126,2.20256102594018,3.12956537739216,2.8343270329458,4.83309602015838,6.61061656852564,1.67983705950435,1.43752564364972,0,0.725362142011344,0,1.02903774414379,1.14613375975503,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,35.0960889739746,33.6214563272771,36.9449659771972,14.3808053048834,16.9056054341484,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,1.76694832761291,0.367472397644862,0.479227355091182,0.919218786610021,4.40463523997555,4.46905683298157,3.07213066512487,1.84640802822271,1.46380229763855,0.52091337055676,4.74611098302348,2.25105044012672,3.0559649555362,1.47314292736834,1.85083185038834,0.745597783301202,0.530083353332288,3.02286240427142,5.79728977403356,0.860423876981386,0,0,0,0.448026887097336,1.68533304158102,1.02258193546835,0.779358013808606,1.41335829804136,1.12674735821344,2.56652954828636,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,1.48439043634778,4.40194402200192,1.92974780784272,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,0.705532242814229,1.63366568728578,1.73036477414062,1.3013942122792,12.3845477272982,1.7794353494215,1.54589062922275,2.42437626567611,0,4.09893115816166,6.49284791121711,0.510914110417183,1.07833612055328,1.79970819298022,1.65191295194984,4.49371918214468,5.03250663100489,1.38219787324151,5.56237824615285,4.34716277461562,4.1557608911912,3.56930778749067,1.42575109390443,2.86136032403214,0.505445516867349,1.05220927943237,1.17108398666433,0.919608417733892,0.720248519221397,1.20563854268572,1.02054748726992,0.768682321709099,1.12442069471675,2.58703370739016,0.215567992932842,0,0.879755620819744,1.31517439456545,0.834141747676794,2.089512999133,1.23469281844766,0.59710280045548,0,2.83082697826187,2.55747149456033,0.414251545071004,0,0,0.946978942340841,0.983821158737019,0.462801338662135,0,0.268273401399619,0.467061369468678,0.658239399653922,0.656669856316381,0.972825714550269,0.877199924551994,1.53685080703735,0.671032093801859,4.41608891984667,0.617427674275707,0,0.264450566663544,0.426576501070468,0,0.902072229254653,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.994782360205754,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,1.13800740571849,0.685491075658373,0,0.610953983535943,0.969762435838129,1.1221731182451,1.64414996523069,2.21415221969403,0.941992367048249,2.34454611451421,0.296452627087149,0.667380422864376,0.196558995113203,0.449724224769707,1.62288097110802,1.92941727801933,0.763877555344259,2.87696137450811,3.56697498905078,2.19649130550465,10.0637744569148,4.09355042435354,2.49630138491648,3.03094653536534,1.61457672169721,1.4473305640901,8.12914036733061,0.568474235311454,0.651859905768103,0,0.938760993154008,0.837531287209079,0.238043640886014,3.90267295715598,2.83743259391144,3.32197034473162,2.55127629851979,4.91589944147214,4.31712454664739,5.49666422609744,28.6503439484617,34.2660580805787,0.491764273019036,1.10374698521893,2.56880943980467,2.22702204525186,0.819674726883377,1.26235463602186,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,4.4984984299053,2.12910127812403,0.35613120733451,1.30309567482861,2.47455184458803,0,0.485561272309963,0.604647113929502,0,0,0.307435147943927,1.80899805217755,0.727067458955011,1.42598951353889,0.632073515871632,0,1.03135543248187,1.70219802876894,0.900305470156551,0.646793418913773,1.07168517515796,1.06404140185364,0.713475270408282,0.164549020602121,1.2178597964584,1.87737366450968,0.21183207086382,0.441056796109924,2.30840754118072,1.77610869365496,1.38719727334758,0.835606408021955,0.984845398470368,0.582961673259701,3.15223013417866,4.10090113914846,3.714963623338,9.4449208958553,2.26042148405629,1.0935538217682,1.60144721244566,0.339956859987711,0.559805809294632,0.414599921413271,0,0.949007980743406,1.01659733563424,0.86404272657441,0.209088296014469,0.218362563746178,1.21377911746339,1.48776220305605,0.523511883968059,0.388844919875379,0.621339313086926,0,0.448549638131936,0.66183396182839,0.972255941720238,0.904118764344118,0.844780627453891,0.938857909166032,0.911430693907651,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.762068066549998,0.403304740547362,0.194915761479505,0.192423683280659,0.584384510907845,0.906921534460845,0,0,0.167884616364078,0.965947970160952,1.68914227906064,2.19781949120718,3.85863082342319,3.51100472824754,1.6942555278512,5.52390283808612,4.58316410751517,6.01486138202907,1.37016503954128,1.5107877947794,2.70009000092722,4.5032120322422,2.71885445390523,3.62432218226274,0.31136204275253,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.551530525350042,0.222246727801615,1.23621034343337,0.962757628775446,0.505394423527595,1.52087579934144,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,1.42888107384922,0.927074607558844,1.15745532278223,2.06042950401653,1.03039244094078,0,1.4198064492747,0.238436189947321,1.0174249164263,0.470546902076653,1.26921911837515,1.64635175585495,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,0.689531376628944,0.409231043169689,0.154936841185966,1.35034627686799,0.749431733813838,1.16965804222704,2.36358159453128,2.86932498103265,1.76473135295612,1.15933917810211
|short_description=p5@Sirpa
|short_description=p5@Sirpa
}}
}}

Revision as of 04:16, 15 November 2012

Short description:p5@Sirpa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sirpa_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 89bp_to_ENSMUST00000103203_5end
EntrezGene:Sirpa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sirpa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G841.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H438.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C735.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D236.94
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.27
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.58e-0954
musculoskeletal system4.77e-0832
neural tube6.15e-0852
neural rod6.15e-0852
future spinal cord6.15e-0852
neural keel6.15e-0852
brain1.09e-0747
future brain1.09e-0747
regional part of brain3.14e-0746
nervous system7.85e-0775
central nervous system8.37e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:129418739..129418767,%2B&oldid=2360975"