FFCP PHASE1:Mm9::chr18:61195429..61195472,-: Difference between revisions
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|id=chr18:61195429..61195472,- | |id=chr18:61195429..61195472,- | ||
|ontology_enrichment_celltype=CL:0002563!8.44e-11!9;CL:0002251!8.44e-11!9;CL:0000239!6.72e-08!6;CL:0000677!6.72e-08!6;CL:0000212!6.72e-08!6;CL:0000584!6.72e-08!6 | |ontology_enrichment_celltype=CL:0002563!8.44e-11!9;CL:0002251!8.44e-11!9;CL:0000239!6.72e-08!6;CL:0000677!6.72e-08!6;CL:0000212!6.72e-08!6;CL:0000584!6.72e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.51e-16,9;CL:0002251,7.51e-16,9;CL:0000239,2.27e-11,6;CL:0000677,2.27e-11,6;CL:0000584,2.27e-11,6;CL:0000075,1.27e-09,7;CL:0002076,9.32e-09,15;CL:0000066,1.34e-08,25;CL:0000682,9.89e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.49e-21!43;UBERON:0005409!6.14e-18!59;UBERON:0000344!6.01e-17!15;UBERON:0001242!5.53e-15!13;UBERON:0000060!5.53e-15!13;UBERON:0001262!5.53e-15!13;UBERON:0004786!5.53e-15!13;UBERON:0003350!8.44e-11!9;UBERON:0004808!8.44e-11!9;UBERON:0001277!8.44e-11!9;UBERON:0004923!9.03e-09!24;UBERON:0000485!2.24e-08!11 | |ontology_enrichment_uberon=UBERON:0000160!4.49e-21!43;UBERON:0005409!6.14e-18!59;UBERON:0000344!6.01e-17!15;UBERON:0001242!5.53e-15!13;UBERON:0000060!5.53e-15!13;UBERON:0001262!5.53e-15!13;UBERON:0004786!5.53e-15!13;UBERON:0003350!8.44e-11!9;UBERON:0004808!8.44e-11!9;UBERON:0001277!8.44e-11!9;UBERON:0004923!9.03e-09!24;UBERON:0000485!2.24e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.91e-45,31;UBERON:0005409,3.21e-29,47;UBERON:0000344,2.23e-25,15;UBERON:0001242,2.47e-22,13;UBERON:0001262,2.47e-22,13;UBERON:0004786,2.47e-22,13;UBERON:0003350,7.51e-16,9;UBERON:0004808,7.51e-16,9;UBERON:0001277,7.51e-16,9;UBERON:0004923,2.13e-14,24;UBERON:0000485,1.28e-12,11;UBERON:0001007,6.97e-09,116;UBERON:0001555,6.97e-09,116;UBERON:0007026,6.97e-09,116;UBERON:0004119,1.33e-08,118;UBERON:0000925,1.33e-08,118;UBERON:0006595,1.33e-08,118;UBERON:0002108,2.93e-08,4;UBERON:0004921,1.39e-07,114 | |||
|phase1_expression=0,4.88565570695105,12.739978702907,10.8887116070459,7.51343594919521,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.67982572424835,2.98232065387321,8.6134794617253,6.8921919385452,5.60225204983311,6.46079626151671,5.29263272495855,3.76941868114018,0,0,0,4.04392267651784,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.70230793328962,0,0,1.41754207454303,8.47070803418039,15.1217069814512,20.9248188723815,9.01605216934572,33.4338878089742,19.3528110776208,19.8956472041151,14.622306533934,9.88701349519644,6.48414149624083,8.36393347668342,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,6.20227903603731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.418176592028937,1.74690050996942,0,0.330613822901344,0,0.90730481304255,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,2.02783439912192,1.13175804831646,0.655490552289177,1.28050304809739,0.918967503289812,0,1.39061191133827,1.15745532278223,1.23625770240992,1.03039244094078,1.37147700954166,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,0.561142271657738,1.42362021749009,1.28055827088233,0.818462086339379,0.77468420592983,0.385813221962283,0,1.16965804222704,2.14871054048298,0,0,0 | |phase1_expression=0,4.88565570695105,12.739978702907,10.8887116070459,7.51343594919521,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.67982572424835,2.98232065387321,8.6134794617253,6.8921919385452,5.60225204983311,6.46079626151671,5.29263272495855,3.76941868114018,0,0,0,4.04392267651784,2.1610503896604,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.70230793328962,0,0,1.41754207454303,8.47070803418039,15.1217069814512,20.9248188723815,9.01605216934572,33.4338878089742,19.3528110776208,19.8956472041151,14.622306533934,9.88701349519644,6.48414149624083,8.36393347668342,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,6.20227903603731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.418176592028937,1.74690050996942,0,0.330613822901344,0,0.90730481304255,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,2.02783439912192,1.13175804831646,0.655490552289177,1.28050304809739,0.918967503289812,0,1.39061191133827,1.15745532278223,1.23625770240992,1.03039244094078,1.37147700954166,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,0.561142271657738,1.42362021749009,1.28055827088233,0.818462086339379,0.77468420592983,0.385813221962283,0,1.16965804222704,2.14871054048298,0,0,0 | ||
|short_description=p@chr18:61195429..61195472,- | |short_description=p@chr18:61195429..61195472,- | ||
}} | }} |
Revision as of 05:48, 15 November 2012
Short description: | p@chr18:61195429..61195472, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:61195429..61195472, - |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.51e-16 | 9 |
epithelial cell of alimentary canal | 7.51e-16 | 9 |
brush border epithelial cell | 2.27e-11 | 6 |
gut absorptive cell | 2.27e-11 | 6 |
enterocyte | 2.27e-11 | 6 |
columnar/cuboidal epithelial cell | 1.27e-09 | 7 |
endo-epithelial cell | 9.32e-09 | 15 |
epithelial cell | 1.34e-08 | 25 |
M cell of gut | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.91e-45 | 31 |
gastrointestinal system | 3.21e-29 | 47 |
mucosa | 2.23e-25 | 15 |
intestinal mucosa | 2.47e-22 | 13 |
wall of intestine | 2.47e-22 | 13 |
gastrointestinal system mucosa | 2.47e-22 | 13 |
epithelium of mucosa | 7.51e-16 | 9 |
gastrointestinal system epithelium | 7.51e-16 | 9 |
intestinal epithelium | 7.51e-16 | 9 |
organ component layer | 2.13e-14 | 24 |
simple columnar epithelium | 1.28e-12 | 11 |
digestive system | 6.97e-09 | 116 |
digestive tract | 6.97e-09 | 116 |
primitive gut | 6.97e-09 | 116 |
endoderm-derived structure | 1.33e-08 | 118 |
endoderm | 1.33e-08 | 118 |
presumptive endoderm | 1.33e-08 | 118 |
small intestine | 2.93e-08 | 4 |
subdivision of digestive tract | 1.39e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.