FFCP PHASE1:Mm9::chr13:98517354..98517369,-: Difference between revisions
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|id=chr13:98517354..98517369,- | |id=chr13:98517354..98517369,- | ||
|ontology_enrichment_celltype=CL:0000117!2.29e-17!23;CL:0000337!2.29e-17!23;CL:0000540!1.02e-10!33;CL:0000047!1.02e-10!33;CL:0000031!1.02e-10!33;CL:0000404!1.02e-10!33;CL:0000393!2.11e-08!39;CL:0000211!2.11e-08!39;CL:0002609!2.27e-07!6;CL:0002319!3.12e-07!43;CL:0000221!5.64e-07!44;CL:0000133!5.64e-07!44 | |ontology_enrichment_celltype=CL:0000117!2.29e-17!23;CL:0000337!2.29e-17!23;CL:0000540!1.02e-10!33;CL:0000047!1.02e-10!33;CL:0000031!1.02e-10!33;CL:0000404!1.02e-10!33;CL:0000393!2.11e-08!39;CL:0000211!2.11e-08!39;CL:0002609!2.27e-07!6;CL:0002319!3.12e-07!43;CL:0000221!5.64e-07!44;CL:0000133!5.64e-07!44 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.17e-24!52;UBERON:0005068!4.17e-24!52;UBERON:0006241!4.17e-24!52;UBERON:0007135!4.17e-24!52;UBERON:0002780!1.19e-23!39;UBERON:0001890!1.19e-23!39;UBERON:0006240!1.19e-23!39;UBERON:0003080!7.17e-23!40;UBERON:0002616!3.66e-22!49;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0001017!4.47e-20!73;UBERON:0005743!4.47e-20!73;UBERON:0000073!2.75e-19!75;UBERON:0001016!2.75e-19!75;UBERON:0003056!8.81e-19!49;UBERON:0000033!1.09e-16!63;UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0002020!1.31e-15!34;UBERON:0000007!6.57e-15!8;UBERON:0003296!6.57e-15!8;UBERON:0010133!6.57e-15!8;UBERON:0001894!1.22e-14!10;UBERON:0006222!1.22e-14!10;UBERON:0004121!1.51e-13!102;UBERON:0000924!1.51e-13!102;UBERON:0006601!1.51e-13!102;UBERON:0002791!5.69e-12!29;UBERON:0003528!5.69e-12!29;UBERON:0001893!5.69e-12!29;UBERON:0007811!4.34e-10!86;UBERON:0000369!1.11e-08!5;UBERON:0002435!1.11e-08!5;UBERON:0000204!1.11e-08!5;UBERON:0010082!1.11e-08!5;UBERON:0000153!1.40e-08!94;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8;UBERON:0000025!3.45e-07!114 | |ontology_enrichment_uberon=UBERON:0001049!4.17e-24!52;UBERON:0005068!4.17e-24!52;UBERON:0006241!4.17e-24!52;UBERON:0007135!4.17e-24!52;UBERON:0002780!1.19e-23!39;UBERON:0001890!1.19e-23!39;UBERON:0006240!1.19e-23!39;UBERON:0003080!7.17e-23!40;UBERON:0002616!3.66e-22!49;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0001017!4.47e-20!73;UBERON:0005743!4.47e-20!73;UBERON:0000073!2.75e-19!75;UBERON:0001016!2.75e-19!75;UBERON:0003056!8.81e-19!49;UBERON:0000033!1.09e-16!63;UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0002020!1.31e-15!34;UBERON:0000007!6.57e-15!8;UBERON:0003296!6.57e-15!8;UBERON:0010133!6.57e-15!8;UBERON:0001894!1.22e-14!10;UBERON:0006222!1.22e-14!10;UBERON:0004121!1.51e-13!102;UBERON:0000924!1.51e-13!102;UBERON:0006601!1.51e-13!102;UBERON:0002791!5.69e-12!29;UBERON:0003528!5.69e-12!29;UBERON:0001893!5.69e-12!29;UBERON:0007811!4.34e-10!86;UBERON:0000369!1.11e-08!5;UBERON:0002435!1.11e-08!5;UBERON:0000204!1.11e-08!5;UBERON:0010082!1.11e-08!5;UBERON:0000153!1.40e-08!94;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8;UBERON:0000025!3.45e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.46e-28,8;UBERON:0003296,3.46e-28,8;UBERON:0010133,3.46e-28,8;UBERON:0001894,1.33e-22,10;UBERON:0006222,1.33e-22,10;UBERON:0002780,7.33e-18,39;UBERON:0001890,7.33e-18,39;UBERON:0006240,7.33e-18,39;UBERON:0003080,2.09e-17,40;UBERON:0002616,4.40e-15,46;UBERON:0000955,9.41e-15,47;UBERON:0006238,9.41e-15,47;UBERON:0003056,3.92e-14,49;UBERON:0001049,2.72e-13,52;UBERON:0005068,2.72e-13,52;UBERON:0006241,2.72e-13,52;UBERON:0007135,2.72e-13,52;UBERON:0000073,8.78e-13,54;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002346,1.04e-10,64;UBERON:0003075,1.04e-10,64;UBERON:0007284,1.04e-10,64;UBERON:0010371,2.53e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0010314,2.82e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,1.34796496001021,0.810035629990144,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.527545150920775,0.274462930807229,1.04182674111352,0.279182999001381,0,0,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3624198934432,0.540183282093931,0.388076051348264,0.857348140126369,8.33499098118686,8.02659679209317,5.75921572107423,1.8267896946876,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,1.34796496001021,0.810035629990144,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.527545150920775,0.274462930807229,1.04182674111352,0.279182999001381,0,0,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0.811206315338788,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3624198934432,0.540183282093931,0.388076051348264,0.857348140126369,8.33499098118686,8.02659679209317,5.75921572107423,1.8267896946876,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000144993,p1@uc007rof.1,p1@uc007rog.1 | |short_description=p1@ENSMUST00000144993,p1@uc007rof.1,p1@uc007rog.1 | ||
}} | }} |
Revision as of 06:47, 15 November 2012
Short description: | p1@ENSMUST00000144993, p1@uc007rof.1, p1@uc007rog.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000144993_5end, CAGE_peak_1_at_uc007rof.1_5end, CAGE_peak_1_at_uc007rog.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | 0bp_to_ENSMUST00000144993, uc007rof.1, uc007rog.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.46e-28 | 8 |
gland of diencephalon | 3.46e-28 | 8 |
neuroendocrine gland | 3.46e-28 | 8 |
diencephalon | 1.33e-22 | 10 |
future diencephalon | 1.33e-22 | 10 |
regional part of forebrain | 7.33e-18 | 39 |
forebrain | 7.33e-18 | 39 |
future forebrain | 7.33e-18 | 39 |
anterior neural tube | 2.09e-17 | 40 |
regional part of brain | 4.40e-15 | 46 |
brain | 9.41e-15 | 47 |
future brain | 9.41e-15 | 47 |
pre-chordal neural plate | 3.92e-14 | 49 |
neural tube | 2.72e-13 | 52 |
neural rod | 2.72e-13 | 52 |
future spinal cord | 2.72e-13 | 52 |
neural keel | 2.72e-13 | 52 |
regional part of nervous system | 8.78e-13 | 54 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
neurectoderm | 1.04e-10 | 64 |
neural plate | 1.04e-10 | 64 |
presumptive neural plate | 1.04e-10 | 64 |
ecto-epithelium | 2.53e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
structure with developmental contribution from neural crest | 2.82e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.