Personal tools

FFCP PHASE1:Mm9::chr6:108778728..108778738,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr6:108778728..108778738,+
|id=chr6:108778728..108778738,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.46e-17!130;UBERON:0000925!3.46e-17!130;UBERON:0006595!3.46e-17!130;UBERON:0001007!4.30e-16!128;UBERON:0001555!4.30e-16!128;UBERON:0007026!4.30e-16!128;UBERON:0004921!1.50e-15!126;UBERON:0004185!1.50e-15!126;UBERON:0000077!6.55e-15!97;UBERON:0001041!1.75e-13!92;UBERON:0002405!3.72e-11!70;UBERON:0003929!4.02e-11!55;UBERON:0003104!7.40e-11!131;UBERON:0009142!7.40e-11!131;UBERON:0000490!8.87e-11!66;UBERON:0000949!3.99e-10!72;UBERON:0005057!5.29e-10!51;UBERON:0005911!5.19e-09!69;UBERON:0001264!4.27e-08!12;UBERON:0003922!4.27e-08!12;UBERON:0002114!4.27e-08!12;UBERON:0003923!4.27e-08!12;UBERON:0003924!4.27e-08!12;UBERON:0003921!4.27e-08!12;UBERON:0002108!4.99e-08!16;UBERON:0005409!1.81e-07!59;UBERON:0002075!3.59e-07!19;UBERON:0002365!4.21e-07!25;UBERON:0002330!4.21e-07!25;UBERON:0001045!9.11e-07!13
|ontology_enrichment_uberon=UBERON:0004119!3.46e-17!130;UBERON:0000925!3.46e-17!130;UBERON:0006595!3.46e-17!130;UBERON:0001007!4.30e-16!128;UBERON:0001555!4.30e-16!128;UBERON:0007026!4.30e-16!128;UBERON:0004921!1.50e-15!126;UBERON:0004185!1.50e-15!126;UBERON:0000077!6.55e-15!97;UBERON:0001041!1.75e-13!92;UBERON:0002405!3.72e-11!70;UBERON:0003929!4.02e-11!55;UBERON:0003104!7.40e-11!131;UBERON:0009142!7.40e-11!131;UBERON:0000490!8.87e-11!66;UBERON:0000949!3.99e-10!72;UBERON:0005057!5.29e-10!51;UBERON:0005911!5.19e-09!69;UBERON:0001264!4.27e-08!12;UBERON:0003922!4.27e-08!12;UBERON:0002114!4.27e-08!12;UBERON:0003923!4.27e-08!12;UBERON:0003924!4.27e-08!12;UBERON:0003921!4.27e-08!12;UBERON:0002108!4.99e-08!16;UBERON:0005409!1.81e-07!59;UBERON:0002075!3.59e-07!19;UBERON:0002365!4.21e-07!25;UBERON:0002330!4.21e-07!25;UBERON:0001045!9.11e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.27e-12,66;UBERON:0003929,7.42e-12,55;UBERON:0000949,1.44e-11,72;UBERON:0001264,3.67e-11,12;UBERON:0002075,1.55e-08,19;UBERON:0000077,2.35e-07,35;UBERON:0005911,2.51e-07,69;UBERON:0004119,2.70e-07,118;UBERON:0000925,2.70e-07,118;UBERON:0006595,2.70e-07,118;UBERON:0002193,5.03e-07,48;UBERON:0002405,5.03e-07,48;UBERON:0002530,9.04e-07,65
|phase1_expression=0.320297694209588,1.39590163055744,3.18499467572675,1.81478526784098,1.50268718983904,1.51091344720701,1.40167584357315,0.774739940649458,4.646027831005,4.91535505276186,0.171217968225505,0.0797721589953364,0.856003649656029,0.611942816932982,0,0.809901069559304,0,1.26184866143295,0.959801035240171,2.12194825899015,0.340173160604279,0.297872853602656,0.261199789138935,0.799962113967033,1.60586496747019,2.29692785646008,0.86152399231815,2.37018355954478,1.14014051673824,1.00812051903972,1.77384408524244,0,1.23012957516914,0,0,0.332469290716985,0.816677425049476,2.09265815368454,2.3440060335714,2.61761871986899,4.70585190424811,0.683045484958446,1.94204141212461,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.55994568650145,0,2.34895648480831,0,0.672187598284928,0.771778308107841,1.43266719969378,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,1.97773272513395,0,1.19840044207362,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0,0,0,0.227178579999552,1.058001841495,1.15945795480671,3.44169550792555,2.719885334831,4.85732872474035,6.49776417447669,1.79210754838934,1.12355536105401,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0,1.1418387971906,2.58937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.628332956648377,0,0.289198713839823,1.76922110389975,0.485300549842228,1.10420759230197,0,0,0,0,1.78819938646014,3.71426885968353,4.19931911695385,6.22644112658017,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0.870848794270651,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.512454881139399,0,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,5.61770549850588,3.60287069960601,5.39910648851626,1.03562886267751,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,1.50801125280162,0.198956472041151,0.779856348476481,1.79763881730844,0.864552199498777,1.1948476395262,0.189667900953082,0.114248512609729,1.1270773567308,0,0.581857461502877,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,2.96452627087149,0.83422552858047,0.589676985339609,0.674586337154561,0.608580364165509,0,0.763877555344259,0.575392274901621,1.29708181420028,2.19649130550465,1.43768206527355,2.23284568601102,0.936113019343682,2.52578877947112,4.12614051100398,2.8946611281802,0.739012760666419,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.630540576424764,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0.144649058581512,1.50791283939272,0,2.95058563811422,0.551873492609465,0.160550589987792,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0.824850614862677,21.2392221343941,0.485561272309963,2.11626489875326,16.9744571780308,13.5838870725155,15.6791925451403,4.39328098385976,13.0872142611902,12.4774082434652,13.5895805912401,17.9211634577498,19.5957532171555,0,0.720244376125241,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0,4.69343416127421,3.60114520468494,2.64634077665954,0.65954501176592,1.13025098687134,0.72375509913787,0.477489376012546,1.31312719796049,0.291480836629851,0,2.05045056957423,0.619160603889667,0.370389054739423,1.13021074202815,0.410082683163076,1.14389086603261,0.679913719975421,1.53946597556024,1.52019971184866,1.90934123603023,0.474503990371703,0.813277868507395,1.18805874903981,0.209088296014469,0.218362563746178,0.809186078308924,1.1571483801547,1.30877970992015,0.259229946583586,2.4853572523477,0.56369293868419,0.149516546043979,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0.864090018773596,4.10814456816632,0.810900861160657,0.924398614483445,2.98817892848929,3.58053391334963,3.17890167650024,2.16351809135944,2.36303243479324,2.72609414859999,2.057583779685,2.72230699869469,1.8516997340553,2.79014340756955,1.75315353272353,0.906921534460845,1.55390167361845,1.34570784914214,3.02192309455341,0.19318959403219,0.563047426353546,0,1.07184189539533,2.50786052017682,2.25900737046827,0,0,0.343706364687375,0,1.5107877947794,0,0,0,0.51776031175182,0.31136204275253,0,0.853668028770671,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,0.50695859978048,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,1.42888107384922,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,1.39590163055744,3.18499467572675,1.81478526784098,1.50268718983904,1.51091344720701,1.40167584357315,0.774739940649458,4.646027831005,4.91535505276186,0.171217968225505,0.0797721589953364,0.856003649656029,0.611942816932982,0,0.809901069559304,0,1.26184866143295,0.959801035240171,2.12194825899015,0.340173160604279,0.297872853602656,0.261199789138935,0.799962113967033,1.60586496747019,2.29692785646008,0.86152399231815,2.37018355954478,1.14014051673824,1.00812051903972,1.77384408524244,0,1.23012957516914,0,0,0.332469290716985,0.816677425049476,2.09265815368454,2.3440060335714,2.61761871986899,4.70585190424811,0.683045484958446,1.94204141212461,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.55994568650145,0,2.34895648480831,0,0.672187598284928,0.771778308107841,1.43266719969378,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,1.97773272513395,0,1.19840044207362,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0,0.56276261003168,0.61119299110724,0,0,0,0.227178579999552,1.058001841495,1.15945795480671,3.44169550792555,2.719885334831,4.85732872474035,6.49776417447669,1.79210754838934,1.12355536105401,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0,1.1418387971906,2.58937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.628332956648377,0,0.289198713839823,1.76922110389975,0.485300549842228,1.10420759230197,0,0,0,0,1.78819938646014,3.71426885968353,4.19931911695385,6.22644112658017,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0.870848794270651,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.512454881139399,0,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,5.61770549850588,3.60287069960601,5.39910648851626,1.03562886267751,0,0,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,1.50801125280162,0.198956472041151,0.779856348476481,1.79763881730844,0.864552199498777,1.1948476395262,0.189667900953082,0.114248512609729,1.1270773567308,0,0.581857461502877,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,2.96452627087149,0.83422552858047,0.589676985339609,0.674586337154561,0.608580364165509,0,0.763877555344259,0.575392274901621,1.29708181420028,2.19649130550465,1.43768206527355,2.23284568601102,0.936113019343682,2.52578877947112,4.12614051100398,2.8946611281802,0.739012760666419,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.630540576424764,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0.144649058581512,1.50791283939272,0,2.95058563811422,0.551873492609465,0.160550589987792,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0.824850614862677,21.2392221343941,0.485561272309963,2.11626489875326,16.9744571780308,13.5838870725155,15.6791925451403,4.39328098385976,13.0872142611902,12.4774082434652,13.5895805912401,17.9211634577498,19.5957532171555,0,0.720244376125241,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0,4.69343416127421,3.60114520468494,2.64634077665954,0.65954501176592,1.13025098687134,0.72375509913787,0.477489376012546,1.31312719796049,0.291480836629851,0,2.05045056957423,0.619160603889667,0.370389054739423,1.13021074202815,0.410082683163076,1.14389086603261,0.679913719975421,1.53946597556024,1.52019971184866,1.90934123603023,0.474503990371703,0.813277868507395,1.18805874903981,0.209088296014469,0.218362563746178,0.809186078308924,1.1571483801547,1.30877970992015,0.259229946583586,2.4853572523477,0.56369293868419,0.149516546043979,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0.864090018773596,4.10814456816632,0.810900861160657,0.924398614483445,2.98817892848929,3.58053391334963,3.17890167650024,2.16351809135944,2.36303243479324,2.72609414859999,2.057583779685,2.72230699869469,1.8516997340553,2.79014340756955,1.75315353272353,0.906921534460845,1.55390167361845,1.34570784914214,3.02192309455341,0.19318959403219,0.563047426353546,0,1.07184189539533,2.50786052017682,2.25900737046827,0,0,0.343706364687375,0,1.5107877947794,0,0,0,0.51776031175182,0.31136204275253,0,0.853668028770671,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,0.50695859978048,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,1.42888107384922,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p2@Edem1
|short_description=p2@Edem1
}}
}}

Revision as of 06:56, 15 November 2012

Short description:p2@Edem1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Edem1_5end
Coexpression cluster:MCL_coexpression_mm9:85
Association with transcript: 93bp_to_ENSMUST00000089162, NM_138677, uc009ddq.1, uc009ddr.1_5end
EntrezGene:Edem1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Edem1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D812.48
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
unilaminar epithelium7.27e-1266
gut epithelium7.42e-1255
endocrine system1.44e-1172
pancreas3.67e-1112
viscus1.55e-0819
mixed endoderm/mesoderm-derived structure2.35e-0735
endo-epithelium2.51e-0769
endoderm-derived structure2.70e-07118
endoderm2.70e-07118
presumptive endoderm2.70e-07118
hemolymphoid system5.03e-0748
immune system5.03e-0748
gland9.04e-0765







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:108778728..108778738,%2B&oldid=2367997"