FFCP PHASE1:Hg19::chr1:207262170..207262212,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.56e-12!254;CL:0000077!9.99e-12!19;CL:0000181!1.11e-08!12;CL:0000417!1.11e-08!12;CL:0000668!1.11e-08!12;CL:0000414!1.11e-08!12;CL:0000412!1.11e-08!12;CL:0000182!1.11e-08!12;CL:0002150!5.78e-07!3;CL:0000861!5.78e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.56e-12!254;CL:0000077!9.99e-12!19;CL:0000181!1.11e-08!12;CL:0000417!1.11e-08!12;CL:0000668!1.11e-08!12;CL:0000414!1.11e-08!12;CL:0000412!1.11e-08!12;CL:0000182!1.11e-08!12;CL:0002150!5.78e-07!3;CL:0000861!5.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.66e-15;19!CL:0000174;1.86e-12;3!CL:0000182;2.53e-11;12!CL:0002097;6.33e-09;2 | |ontology_enrichment_celltype_v019=CL:0000077;2.66e-15;19!CL:0000174;1.86e-12;3!CL:0000182;2.53e-11;12!CL:0002097;6.33e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.84e-15,19;CL:0000066,4.48e-15,253;CL:0000174,2.02e-12,3;CL:0000182,2.39e-11,12;CL:0002097,6.59e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.52e-10;29!UBERON:0009497;3.66e-10;13!UBERON:0004161;1.56e-08;11 | |ontology_enrichment_development_v019=UBERON:0008947;2.52e-10;29!UBERON:0009497;3.66e-10;13!UBERON:0004161;1.56e-08;11 | ||
|ontology_enrichment_disease=DOID:305!8.30e-17!106;DOID:162!2.35e-11!235;DOID:14566!8.54e-11!239;DOID:0050687!3.90e-10!143 | |ontology_enrichment_disease=DOID:305!8.30e-17!106;DOID:162!2.35e-11!235;DOID:14566!8.54e-11!239;DOID:0050687!3.90e-10!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.23e-16,106;DOID:162,1.96e-13,235;DOID:14566,5.53e-13,239;DOID:0050687,2.56e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.86e-18!9;UBERON:0000077!3.62e-16!130;UBERON:0004119!1.56e-14!169;UBERON:0000925!1.56e-14!169;UBERON:0006595!1.56e-14!169;UBERON:0001007!2.17e-14!155;UBERON:0001555!2.17e-14!155;UBERON:0007026!2.17e-14!155;UBERON:0004921!2.75e-14!129;UBERON:0004185!2.75e-14!129;UBERON:0001041!3.86e-13!98;UBERON:0009497!1.35e-12!25;UBERON:0000015!1.35e-12!25;UBERON:0002423!1.35e-12!25;UBERON:0006235!1.35e-12!25;UBERON:0004161!1.35e-12!25;UBERON:0001557!6.02e-12!19;UBERON:0003929!1.06e-11!54;UBERON:0005911!3.60e-11!82;UBERON:0007499!5.98e-11!25;UBERON:0009856!2.21e-10!26;UBERON:0001048!1.45e-09!168;UBERON:0008835!1.66e-09!22;UBERON:0003894!1.66e-09!22;UBERON:0000466!3.37e-09!126;UBERON:0002368!5.30e-09!35;UBERON:0009854!5.86e-09!23;UBERON:0002417!6.00e-09!61;UBERON:0000916!6.00e-09!61;UBERON:0008947!1.42e-08!38;UBERON:0003258!1.42e-08!38;UBERON:0002294!3.45e-08!7;UBERON:0001173!3.45e-08!7;UBERON:0004912!3.45e-08!7;UBERON:0002107!7.84e-08!19;UBERON:0006925!7.84e-08!19;UBERON:0008836!7.84e-08!19;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0009569!2.68e-07!113;UBERON:0000065!3.29e-07!53;UBERON:0005057!4.09e-07!26;UBERON:0000949!4.20e-07!45;UBERON:0000072!4.55e-07!46;UBERON:0000062!6.13e-07!511 | |ontology_enrichment_uberon=UBERON:0001737!4.86e-18!9;UBERON:0000077!3.62e-16!130;UBERON:0004119!1.56e-14!169;UBERON:0000925!1.56e-14!169;UBERON:0006595!1.56e-14!169;UBERON:0001007!2.17e-14!155;UBERON:0001555!2.17e-14!155;UBERON:0007026!2.17e-14!155;UBERON:0004921!2.75e-14!129;UBERON:0004185!2.75e-14!129;UBERON:0001041!3.86e-13!98;UBERON:0009497!1.35e-12!25;UBERON:0000015!1.35e-12!25;UBERON:0002423!1.35e-12!25;UBERON:0006235!1.35e-12!25;UBERON:0004161!1.35e-12!25;UBERON:0001557!6.02e-12!19;UBERON:0003929!1.06e-11!54;UBERON:0005911!3.60e-11!82;UBERON:0007499!5.98e-11!25;UBERON:0009856!2.21e-10!26;UBERON:0001048!1.45e-09!168;UBERON:0008835!1.66e-09!22;UBERON:0003894!1.66e-09!22;UBERON:0000466!3.37e-09!126;UBERON:0002368!5.30e-09!35;UBERON:0009854!5.86e-09!23;UBERON:0002417!6.00e-09!61;UBERON:0000916!6.00e-09!61;UBERON:0008947!1.42e-08!38;UBERON:0003258!1.42e-08!38;UBERON:0002294!3.45e-08!7;UBERON:0001173!3.45e-08!7;UBERON:0004912!3.45e-08!7;UBERON:0002107!7.84e-08!19;UBERON:0006925!7.84e-08!19;UBERON:0008836!7.84e-08!19;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0009569!2.68e-07!113;UBERON:0000065!3.29e-07!53;UBERON:0005057!4.09e-07!26;UBERON:0000949!4.20e-07!45;UBERON:0000072!4.55e-07!46;UBERON:0000062!6.13e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-37;9!UBERON:0001557;2.86e-37;9!UBERON:0002423;1.04e-13;25!UBERON:0002107;5.25e-12;19!UBERON:0006925;5.25e-12;19!UBERON:0002368;4.45e-09;33!UBERON:0000949;9.88e-08;43!UBERON:0000072;1.85e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-37;9!UBERON:0001557;2.86e-37;9!UBERON:0002423;1.04e-13;25!UBERON:0002107;5.25e-12;19!UBERON:0006925;5.25e-12;19!UBERON:0002368;4.45e-09;33!UBERON:0000949;9.88e-08;43!UBERON:0000072;1.85e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-37,9;UBERON:0001557,1.06e-16,19;UBERON:0009497,9.50e-14,25;UBERON:0000015,9.50e-14,25;UBERON:0002423,9.50e-14,25;UBERON:0006235,9.50e-14,25;UBERON:0004161,9.50e-14,25;UBERON:0008835,6.15e-13,22;UBERON:0003894,6.15e-13,22;UBERON:0009854,2.65e-12,23;UBERON:0001041,2.86e-12,87;UBERON:0002107,5.05e-12,19;UBERON:0006925,5.05e-12,19;UBERON:0008836,5.05e-12,19;UBERON:0007499,3.46e-11,25;UBERON:0009856,1.08e-10,26;UBERON:0004921,7.55e-10,118;UBERON:0004119,2.26e-09,160;UBERON:0000925,2.26e-09,160;UBERON:0006595,2.26e-09,160;UBERON:0002368,2.53e-09,35;UBERON:0003124,1.76e-08,7;UBERON:0000949,2.68e-08,45;UBERON:0002417,4.95e-08,60;UBERON:0000916,4.95e-08,60;UBERON:0001007,5.26e-08,145;UBERON:0001555,5.26e-08,145;UBERON:0007026,5.26e-08,145;UBERON:0005172,7.90e-08,54;UBERON:0005173,7.90e-08,54;UBERON:0008947,1.80e-07,38;UBERON:0003258,1.80e-07,38;UBERON:0002365,7.23e-07,31;UBERON:0002330,7.23e-07,31 | |||
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| ||
|short_description=p1@C4BPB | |short_description=p1@C4BPB | ||
}} | }} |
Revision as of 19:50, 15 November 2012
Short description: | p1@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000367078, NM_001017365, NM_001017366, uc001hfi.2, uc001hfj.2_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | P20851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.84e-15 | 19 |
epithelial cell | 4.48e-15 | 253 |
steroid hormone secreting cell | 2.02e-12 | 3 |
hepatocyte | 2.39e-11 | 12 |
cortical cell of adrenal gland | 6.59e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.87e-37 | 9 |
upper respiratory tract | 1.06e-16 | 19 |
epithelium of foregut-midgut junction | 9.50e-14 | 25 |
anatomical boundary | 9.50e-14 | 25 |
hepatobiliary system | 9.50e-14 | 25 |
foregut-midgut junction | 9.50e-14 | 25 |
septum transversum | 9.50e-14 | 25 |
hepatic diverticulum | 6.15e-13 | 22 |
liver primordium | 6.15e-13 | 22 |
digestive tract diverticulum | 2.65e-12 | 23 |
foregut | 2.86e-12 | 87 |
liver | 5.05e-12 | 19 |
digestive gland | 5.05e-12 | 19 |
liver bud | 5.05e-12 | 19 |
epithelial sac | 3.46e-11 | 25 |
sac | 1.08e-10 | 26 |
subdivision of digestive tract | 7.55e-10 | 118 |
endoderm-derived structure | 2.26e-09 | 160 |
endoderm | 2.26e-09 | 160 |
presumptive endoderm | 2.26e-09 | 160 |
endocrine gland | 2.53e-09 | 35 |
chorion | 1.76e-08 | 7 |
endocrine system | 2.68e-08 | 45 |
abdominal segment of trunk | 4.95e-08 | 60 |
abdomen | 4.95e-08 | 60 |
digestive system | 5.26e-08 | 145 |
digestive tract | 5.26e-08 | 145 |
primitive gut | 5.26e-08 | 145 |
abdomen element | 7.90e-08 | 54 |
abdominal segment element | 7.90e-08 | 54 |
respiratory primordium | 1.80e-07 | 38 |
endoderm of foregut | 1.80e-07 | 38 |
exocrine gland | 7.23e-07 | 31 |
exocrine system | 7.23e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.23e-16 | 106 |
cancer | 1.96e-13 | 235 |
disease of cellular proliferation | 5.53e-13 | 239 |
cell type cancer | 2.56e-10 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.