FFCP PHASE1:Hg19::chr1:95107584..95107608,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!6.31e-29!254;CL:0002076!2.30e-24!43;CL:0002368!6.70e-17!13;CL:0000223!2.95e-16!59;CL:0000244!4.54e-13!4;CL:0000731!4.54e-13!4;CL:0002159!5.50e-11!13;CL:0002166!4.75e-10!3;CL:0002328!1.10e-09!3;CL:0000239!1.92e-09!3;CL:1000615!1.92e-09!3;CL:0002306!1.92e-09!3;CL:0002621!2.72e-09!3;CL:0002149!2.82e-08!6;CL:0002255!2.82e-08!6;CL:0002202!3.91e-08!9;CL:0002632!3.91e-08!9;CL:0000575!2.35e-07!2 | |ontology_enrichment_celltype=CL:0000066!6.31e-29!254;CL:0002076!2.30e-24!43;CL:0002368!6.70e-17!13;CL:0000223!2.95e-16!59;CL:0000244!4.54e-13!4;CL:0000731!4.54e-13!4;CL:0002159!5.50e-11!13;CL:0002166!4.75e-10!3;CL:0002328!1.10e-09!3;CL:0000239!1.92e-09!3;CL:1000615!1.92e-09!3;CL:0002306!1.92e-09!3;CL:0002621!2.72e-09!3;CL:0002149!2.82e-08!6;CL:0002255!2.82e-08!6;CL:0002202!3.91e-08!9;CL:0002632!3.91e-08!9;CL:0000575!2.35e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.23e-17;4!CL:0000731;2.23e-17;4!CL:0000575;1.79e-15;2!CL:0002159;5.60e-13;14!CL:0002368;2.58e-09;13 | |ontology_enrichment_celltype_v019=CL:0000244;2.23e-17;4!CL:0000731;2.23e-17;4!CL:0000575;1.79e-15;2!CL:0002159;5.60e-13;14!CL:0002368;2.58e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.94e-17,4;CL:0000731,1.94e-17,4;CL:0000066,1.13e-15,253;CL:0000575,1.23e-15,2;CL:0002159,3.92e-13,14;CL:0002368,2.76e-09,13 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.72e-12!14;DOID:299!3.63e-10!25;DOID:305!4.80e-10!106;DOID:3001!2.82e-08!6 | |ontology_enrichment_disease=DOID:1749!1.72e-12!14;DOID:299!3.63e-10!25;DOID:305!4.80e-10!106;DOID:3001!2.82e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:3111;4.88e-09;1!DOID:3603;4.88e-09;1!DOID:1749;6.26e-09;14 | |ontology_enrichment_disease_v019=DOID:3111;4.88e-09;1!DOID:3603;4.88e-09;1!DOID:1749;6.26e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,4.89e-09,1;DOID:3603,4.89e-09,1;DOID:1749,7.01e-09,14;DOID:305,5.05e-08,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002394;1.39e-17;4!UBERON:0003928;1.39e-17;4!UBERON:0002294;2.67e-17;7!UBERON:0001173;2.67e-17;7!UBERON:0000365;5.11e-14;5!UBERON:0005910;8.99e-12;6!UBERON:0000997;1.37e-08;1!UBERON:0004913;1.37e-08;1!UBERON:0005056;1.37e-08;1!UBERON:0003703;1.37e-08;1!UBERON:0004176;1.37e-08;1!UBERON:0001174;1.37e-08;1!UBERON:0004914;1.37e-08;1!UBERON:0000964;3.46e-08;4!UBERON:0010409;3.46e-08;4!UBERON:0000058;2.47e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002394;1.39e-17;4!UBERON:0003928;1.39e-17;4!UBERON:0002294;2.67e-17;7!UBERON:0001173;2.67e-17;7!UBERON:0000365;5.11e-14;5!UBERON:0005910;8.99e-12;6!UBERON:0000997;1.37e-08;1!UBERON:0004913;1.37e-08;1!UBERON:0005056;1.37e-08;1!UBERON:0003703;1.37e-08;1!UBERON:0004176;1.37e-08;1!UBERON:0001174;1.37e-08;1!UBERON:0004914;1.37e-08;1!UBERON:0000964;3.46e-08;4!UBERON:0010409;3.46e-08;4!UBERON:0000058;2.47e-07;10 | ||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.64625428112938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,0.839910640994298,0.992425680696705,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,1.32227932288782,1.15314040419064,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.68120910214315,0,0,2.58303223602738,1.68471475667626,0.886860307073351,2.29723400206959,0,0,0,0,0,0,0,0,0,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,2.51631383212515,7.33986816169998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,1.27390116638691,4.52707874218093,0,0,0.0967563312890851,0,0,0,0,2.25980740780532,0,0,0,0,1.28254112402454,0.85381197895741,0,0,0,0,1.29649318189335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.93061915699296,1.91107787795487,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,13.762899996912,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:95107584..95107608,- | |short_description=p@chr1:95107584..95107608,- | ||
}} | }} |
Revision as of 04:36, 17 November 2012
Short description: | p@chr1:95107584..95107608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:95107584..95107608, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.94e-17 | 4 |
urothelial cell | 1.94e-17 | 4 |
epithelial cell | 1.13e-15 | 253 |
corneal epithelial cell | 1.23e-15 | 2 |
general ecto-epithelial cell | 3.92e-13 | 14 |
respiratory epithelial cell | 2.76e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.57e-14 | 5 |
biliary system | 1.94e-13 | 9 |
biliary tree | 1.94e-13 | 9 |
biliary bud | 1.94e-13 | 9 |
bile duct | 6.83e-12 | 6 |
digestive system duct | 6.83e-12 | 6 |
transitional epithelium | 8.21e-12 | 6 |
hepatopancreatic ampulla | 1.42e-08 | 1 |
extrahepatic bile duct | 1.42e-08 | 1 |
common bile duct | 1.42e-08 | 1 |
duodenal papilla | 1.42e-08 | 1 |
mammalian vulva | 1.91e-08 | 1 |
external female genitalia | 1.91e-08 | 1 |
cornea | 2.88e-08 | 4 |
eye surface | 2.88e-08 | 4 |
optic eminence | 2.88e-08 | 4 |
corneal primordium | 2.88e-08 | 4 |
endo-epithelium | 1.93e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.89e-09 | 1 |
mucinous cystadenocarcinoma | 4.89e-09 | 1 |
squamous cell carcinoma | 7.01e-09 | 14 |
carcinoma | 5.05e-08 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.