FFCP PHASE1:Hg19::chr12:80084737..80084763,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!2.26e-52!254;CL:0002321!3.68e-13!248;CL:0000076!6.35e-13!62;CL:0000220!1.36e-12!246;CL:0000223!2.00e-11!59;CL:0002076!4.45e-10!43;CL:0000077!7.95e-09!19 | |ontology_enrichment_celltype=CL:0000066!2.26e-52!254;CL:0002321!3.68e-13!248;CL:0000076!6.35e-13!62;CL:0000220!1.36e-12!246;CL:0000223!2.00e-11!59;CL:0002076!4.45e-10!43;CL:0000077!7.95e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.59e-09;19!CL:0002076;1.46e-08;42!CL:0002251;8.08e-07;20 | |ontology_enrichment_celltype_v019=CL:0000077;4.59e-09;19!CL:0002076;1.46e-08;42!CL:0002251;8.08e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-52,253;CL:0000076,1.31e-12,63;CL:0000223,4.45e-12,58;CL:0002321,1.09e-11,250;CL:0002076,6.49e-11,42;CL:0000077,4.89e-09,19;CL:0002251,9.11e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.51e-09;29!UBERON:0001041;3.66e-08;30 | |ontology_enrichment_development_v019=UBERON:0008947;2.51e-09;29!UBERON:0001041;3.66e-08;30 | ||
|ontology_enrichment_disease=DOID:305!9.55e-32!106;DOID:0050687!6.12e-31!143;DOID:162!2.51e-17!235;DOID:14566!1.06e-16!239;DOID:299!4.57e-08!25;DOID:7!2.83e-07!39;DOID:1749!3.24e-07!14 | |ontology_enrichment_disease=DOID:305!9.55e-32!106;DOID:0050687!6.12e-31!143;DOID:162!2.51e-17!235;DOID:14566!1.06e-16!239;DOID:299!4.57e-08!25;DOID:7!2.83e-07!39;DOID:1749!3.24e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:305;4.35e-10;106!DOID:299;4.04e-08;25!DOID:1749;2.20e-07;14 | |ontology_enrichment_disease_v019=DOID:305;4.35e-10;106!DOID:299;4.04e-08;25!DOID:1749;2.20e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,7.57e-32,106;DOID:0050687,6.49e-31,143;DOID:162,7.43e-18,235;DOID:14566,5.11e-17,239;DOID:299,2.96e-08,25;DOID:1749,2.22e-07,14;DOID:7,6.70e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.88e-18!169;UBERON:0000925!8.88e-18!169;UBERON:0006595!8.88e-18!169;UBERON:0001007!1.10e-15!155;UBERON:0001555!1.10e-15!155;UBERON:0007026!1.10e-15!155;UBERON:0000466!3.17e-15!126;UBERON:0000077!1.65e-13!130;UBERON:0009569!2.89e-13!113;UBERON:0000464!1.06e-12!104;UBERON:0004921!1.07e-12!129;UBERON:0004185!1.07e-12!129;UBERON:0001048!4.28e-11!168;UBERON:0005911!1.09e-10!82;UBERON:0001004!4.78e-10!72;UBERON:0000468!7.65e-10!659;UBERON:0001041!8.49e-10!98;UBERON:0005177!2.62e-09!107;UBERON:0008947!3.14e-09!38;UBERON:0003258!3.14e-09!38;UBERON:0000475!3.37e-09!365;UBERON:0003104!8.59e-09!238;UBERON:0009142!8.59e-09!238;UBERON:0002553!1.11e-08!70;UBERON:0000481!1.35e-08!347;UBERON:0005153!1.84e-08!37;UBERON:0000065!2.13e-08!53;UBERON:0002100!3.96e-08!216;UBERON:0000477!5.36e-08!286;UBERON:0000062!5.71e-08!511;UBERON:0003886!1.37e-07!63;UBERON:0000915!3.27e-07!52;UBERON:0005156!3.79e-07!59;UBERON:0000990!3.79e-07!59;UBERON:0002417!5.42e-07!61;UBERON:0000916!5.42e-07!61;UBERON:0000064!6.15e-07!219;UBERON:0004111!7.94e-07!241;UBERON:0002530!9.89e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!8.88e-18!169;UBERON:0000925!8.88e-18!169;UBERON:0006595!8.88e-18!169;UBERON:0001007!1.10e-15!155;UBERON:0001555!1.10e-15!155;UBERON:0007026!1.10e-15!155;UBERON:0000466!3.17e-15!126;UBERON:0000077!1.65e-13!130;UBERON:0009569!2.89e-13!113;UBERON:0000464!1.06e-12!104;UBERON:0004921!1.07e-12!129;UBERON:0004185!1.07e-12!129;UBERON:0001048!4.28e-11!168;UBERON:0005911!1.09e-10!82;UBERON:0001004!4.78e-10!72;UBERON:0000468!7.65e-10!659;UBERON:0001041!8.49e-10!98;UBERON:0005177!2.62e-09!107;UBERON:0008947!3.14e-09!38;UBERON:0003258!3.14e-09!38;UBERON:0000475!3.37e-09!365;UBERON:0003104!8.59e-09!238;UBERON:0009142!8.59e-09!238;UBERON:0002553!1.11e-08!70;UBERON:0000481!1.35e-08!347;UBERON:0005153!1.84e-08!37;UBERON:0000065!2.13e-08!53;UBERON:0002100!3.96e-08!216;UBERON:0000477!5.36e-08!286;UBERON:0000062!5.71e-08!511;UBERON:0003886!1.37e-07!63;UBERON:0000915!3.27e-07!52;UBERON:0005156!3.79e-07!59;UBERON:0000990!3.79e-07!59;UBERON:0002417!5.42e-07!61;UBERON:0000916!5.42e-07!61;UBERON:0000064!6.15e-07!219;UBERON:0004111!7.94e-07!241;UBERON:0002530!9.89e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.45e-08;44!UBERON:0000072;1.49e-07;37!UBERON:0004807;9.88e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000065;5.45e-08;44!UBERON:0000072;1.49e-07;37!UBERON:0004807;9.88e-07;22 | ||
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| ||
|short_description=p3@PAWR | |short_description=p3@PAWR | ||
}} | }} |
Revision as of 10:56, 18 November 2012
Short description: | p3@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | 26bp_to_NM_002583, uc001syx.2_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | Q96IZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.38e-52 | 253 |
squamous epithelial cell | 1.31e-12 | 63 |
endodermal cell | 4.45e-12 | 58 |
embryonic cell | 1.09e-11 | 250 |
endo-epithelial cell | 6.49e-11 | 42 |
mesothelial cell | 4.89e-09 | 19 |
epithelial cell of alimentary canal | 9.11e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.59e-17 | 160 |
endoderm | 1.59e-17 | 160 |
presumptive endoderm | 1.59e-17 | 160 |
digestive system | 2.64e-15 | 145 |
digestive tract | 2.64e-15 | 145 |
primitive gut | 2.64e-15 | 145 |
subdivision of trunk | 3.88e-13 | 112 |
subdivision of digestive tract | 1.33e-12 | 118 |
endo-epithelium | 4.16e-11 | 82 |
respiratory system | 6.02e-10 | 74 |
foregut | 6.35e-10 | 87 |
trunk region element | 1.18e-09 | 101 |
primordium | 1.91e-09 | 160 |
respiratory primordium | 3.29e-09 | 38 |
endoderm of foregut | 3.29e-09 | 38 |
epithelial bud | 1.57e-08 | 37 |
respiratory tract | 1.81e-08 | 54 |
thoracic segment of trunk | 1.57e-07 | 52 |
reproductive structure | 4.61e-07 | 59 |
reproductive system | 4.61e-07 | 59 |
trunk | 4.83e-07 | 199 |
gland | 5.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.57e-32 | 106 |
cell type cancer | 6.49e-31 | 143 |
cancer | 7.43e-18 | 235 |
disease of cellular proliferation | 5.11e-17 | 239 |
adenocarcinoma | 2.96e-08 | 25 |
squamous cell carcinoma | 2.22e-07 | 14 |
disease of anatomical entity | 6.70e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.