FFCP PHASE1:Hg19::chr4:114683496..114683501,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000542!3.09e-31!53;CL:0000051!3.09e-31!53;CL:0000838!3.11e-30!52;CL:0000945!1.55e-23!24;CL:0000826!1.55e-23!24;CL:0002087!3.04e-21!119;CL:0000738!1.35e-19!140;CL:0002031!4.98e-17!124;CL:0000988!2.37e-15!182;CL:0000037!1.77e-14!172;CL:0000566!1.77e-14!172;CL:0002032!1.55e-13!165;CL:0000837!1.55e-13!165;CL:0000236!2.22e-13!14;CL:0000080!1.32e-09!6;CL:0000134!5.23e-08!358;CL:0002320!1.75e-07!365;CL:0000219!4.36e-07!390;CL:0000084!7.54e-07!25;CL:0000827!7.54e-07!25 | |ontology_enrichment_celltype=CL:0000542!3.09e-31!53;CL:0000051!3.09e-31!53;CL:0000838!3.11e-30!52;CL:0000945!1.55e-23!24;CL:0000826!1.55e-23!24;CL:0002087!3.04e-21!119;CL:0000738!1.35e-19!140;CL:0002031!4.98e-17!124;CL:0000988!2.37e-15!182;CL:0000037!1.77e-14!172;CL:0000566!1.77e-14!172;CL:0002032!1.55e-13!165;CL:0000837!1.55e-13!165;CL:0000236!2.22e-13!14;CL:0000080!1.32e-09!6;CL:0000134!5.23e-08!358;CL:0002320!1.75e-07!365;CL:0000219!4.36e-07!390;CL:0000084!7.54e-07!25;CL:0000827!7.54e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.26e-30;24!CL:0000623;7.93e-29;3!CL:0000542;7.69e-26;53!CL:0000236;3.46e-18;13!CL:0002087;6.49e-10;104 | |ontology_enrichment_celltype_v019=CL:0000945;1.26e-30;24!CL:0000623;7.93e-29;3!CL:0000542;7.69e-26;53!CL:0000236;3.46e-18;13!CL:0002087;6.49e-10;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.74e-44,52;CL:0000542,5.76e-43,53;CL:0000051,5.76e-43,53;CL:0000945,1.20e-30,24;CL:0000826,1.20e-30,24;CL:0000623,1.35e-28,3;CL:0000825,1.35e-28,3;CL:0000988,1.63e-18,177;CL:0002087,2.60e-18,115;CL:0002031,1.89e-17,120;CL:0000236,6.86e-17,14;CL:0000738,4.06e-15,136;CL:0002032,3.46e-14,161;CL:0000837,3.46e-14,161;CL:0000037,1.73e-13,168 | |||
|ontology_enrichment_development_v019=CL:0000051;7.69e-26;53 | |ontology_enrichment_development_v019=CL:0000051;7.69e-26;53 | ||
|ontology_enrichment_disease=DOID:0060058!7.17e-07!10 | |ontology_enrichment_disease=DOID:0060058!7.17e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;8.61e-11;1!DOID:0060061;8.61e-11;1!DOID:8691;8.61e-11;1 | |ontology_enrichment_disease_v019=DOID:0060060;8.61e-11;1!DOID:0060061;8.61e-11;1!DOID:8691;8.61e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.05e-11,1;DOID:0060061,5.05e-11,1;DOID:8691,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!8.85e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!8.85e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.83e-09;10 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.83e-09;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.83e-09,10;UBERON:0000358,1.83e-09,10;UBERON:0000307,1.83e-09,10;UBERON:0000091,1.83e-09,10;UBERON:0000087,1.83e-09,10;UBERON:0007010,1.83e-09,10;UBERON:0007806,1.83e-09,10;UBERON:0008780,1.83e-09,10;UBERON:0005728,1.83e-09,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.14620108621927,1.39571002064908,1.25937250101887,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0.284338464974843,0,0,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0.889509253863555,1.70692089026603,0.400395987036012,0.574752439954483,0.661044872784862,0,2.27685187643779,1.17447437874188,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,1.81446068902259,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.573673241497627,0,0,2.1349799145941,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.784596007954691,1.18218456121156,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,1.14117339516596,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41302821701555,2.34771483998355,2.08843899010911,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0,0.415440338029185,0,0.77380195455795,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.992332043623902,0,1.09613338542806,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,1.39991177098451,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.14620108621927,1.39571002064908,1.25937250101887,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0.284338464974843,0,0,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0.889509253863555,1.70692089026603,0.400395987036012,0.574752439954483,0.661044872784862,0,2.27685187643779,1.17447437874188,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,1.81446068902259,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.573673241497627,0,0,2.1349799145941,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.784596007954691,1.18218456121156,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,1.14117339516596,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41302821701555,2.34771483998355,2.08843899010911,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0,0.415440338029185,0,0.77380195455795,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.992332043623902,0,1.09613338542806,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,1.39991177098451,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p13@CAMK2D | |short_description=p13@CAMK2D | ||
}} | }} |
Revision as of 17:31, 18 November 2012
Short description: | p13@CAMK2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_CAMK2D_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -413bp_to_ENST00000296402, ENST00000394526, ENST00000418639, ENST00000429180, ENST00000454265, NM_001221, NM_172114, NM_172115, NM_172127, NM_172128, NM_172129, uc003ibi.2, uc003ibj.2, uc003ibk.2, uc003ibl.2, uc003ibm.2, uc003ibn.2, uc003ibo.3_5end |
EntrezGene: | CAMK2D |
HGNC: | 1462 |
UniProt: | Q13557 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.74e-44 | 52 |
lymphocyte | 5.76e-43 | 53 |
common lymphoid progenitor | 5.76e-43 | 53 |
lymphocyte of B lineage | 1.20e-30 | 24 |
pro-B cell | 1.20e-30 | 24 |
natural killer cell | 1.35e-28 | 3 |
pro-NK cell | 1.35e-28 | 3 |
hematopoietic cell | 1.63e-18 | 177 |
nongranular leukocyte | 2.60e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.89e-17 | 120 |
B cell | 6.86e-17 | 14 |
leukocyte | 4.06e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.46e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-14 | 161 |
hematopoietic stem cell | 1.73e-13 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.83e-09 | 10 |
blastocyst | 1.83e-09 | 10 |
blastula | 1.83e-09 | 10 |
bilaminar disc | 1.83e-09 | 10 |
inner cell mass | 1.83e-09 | 10 |
cleaving embryo | 1.83e-09 | 10 |
connecting stalk | 1.83e-09 | 10 |
inner cell mass derived epiblast | 1.83e-09 | 10 |
extraembryonic mesoderm | 1.83e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.05e-11 | 1 |
cutaneous T cell lymphoma | 5.05e-11 | 1 |
mycosis fungoides | 5.05e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.