FFCP PHASE1:Hg19::chr1:165796811..165796860,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.80e-35!254;CL:0000548!6.16e-23!679;CL:0000004!6.16e-23!679;CL:0000255!6.16e-23!679;CL:0002321!1.49e-22!248;CL:0000012!4.28e-22!682;CL:0000220!4.89e-22!246;CL:0000055!6.48e-13!180;CL:0000076!1.42e-11!62;CL:0000222!6.37e-10!119;CL:0000003!7.23e-10!722;CL:0000063!2.03e-09!578;CL:0000144!1.50e-08!625;CL:0000057!3.24e-07!75;CL:1000449!9.14e-07!16 | |ontology_enrichment_celltype=CL:0000066!5.80e-35!254;CL:0000548!6.16e-23!679;CL:0000004!6.16e-23!679;CL:0000255!6.16e-23!679;CL:0002321!1.49e-22!248;CL:0000012!4.28e-22!682;CL:0000220!4.89e-22!246;CL:0000055!6.48e-13!180;CL:0000076!1.42e-11!62;CL:0000222!6.37e-10!119;CL:0000003!7.23e-10!722;CL:0000063!2.03e-09!578;CL:0000144!1.50e-08!625;CL:0000057!3.24e-07!75;CL:1000449!9.14e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.72e-07;15 | |ontology_enrichment_celltype_v019=CL:1000449;7.72e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.22e-35,253;CL:0002321,8.86e-23,250;CL:0000076,3.98e-11,63;CL:0000222,4.44e-10,121;CL:0000057,1.71e-07,76;CL:1000449,7.49e-07,15;CL:0000223,9.61e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.60e-27!235;DOID:14566!1.63e-26!239;DOID:0050687!1.14e-19!143;DOID:305!1.02e-16!106;DOID:0050686!1.89e-08!137 | |ontology_enrichment_disease=DOID:162!7.60e-27!235;DOID:14566!1.63e-26!239;DOID:0050687!1.14e-19!143;DOID:305!1.02e-16!106;DOID:0050686!1.89e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,7.59e-27,235;DOID:14566,1.63e-26,239;DOID:0050687,1.14e-19,143;DOID:305,1.02e-16,106;DOID:0050686,1.89e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.21e-16!238;UBERON:0009142!3.21e-16!238;UBERON:0002100!1.08e-10!216;UBERON:0005256!2.09e-10!143;UBERON:0000119!2.64e-10!312;UBERON:0000483!8.46e-10!309;UBERON:0000481!1.77e-09!347;UBERON:0003914!5.25e-09!118;UBERON:0004119!2.30e-08!169;UBERON:0000925!2.30e-08!169;UBERON:0006595!2.30e-08!169;UBERON:0000475!8.92e-08!365;UBERON:0005177!9.29e-08!107;UBERON:0008947!1.51e-07!38;UBERON:0003258!1.51e-07!38;UBERON:0000490!1.80e-07!138;UBERON:0001737!2.09e-07!9;UBERON:0006554!5.67e-07!44;UBERON:0000072!6.09e-07!46;UBERON:0001048!6.46e-07!168;UBERON:0001007!6.50e-07!155;UBERON:0001555!6.50e-07!155;UBERON:0007026!6.50e-07!155;UBERON:0004211!9.14e-07!16;UBERON:0001285!9.14e-07!16;UBERON:0007684!9.14e-07!16;UBERON:0003220!9.14e-07!16;UBERON:0004208!9.14e-07!16 | |ontology_enrichment_uberon=UBERON:0003104!3.21e-16!238;UBERON:0009142!3.21e-16!238;UBERON:0002100!1.08e-10!216;UBERON:0005256!2.09e-10!143;UBERON:0000119!2.64e-10!312;UBERON:0000483!8.46e-10!309;UBERON:0000481!1.77e-09!347;UBERON:0003914!5.25e-09!118;UBERON:0004119!2.30e-08!169;UBERON:0000925!2.30e-08!169;UBERON:0006595!2.30e-08!169;UBERON:0000475!8.92e-08!365;UBERON:0005177!9.29e-08!107;UBERON:0008947!1.51e-07!38;UBERON:0003258!1.51e-07!38;UBERON:0000490!1.80e-07!138;UBERON:0001737!2.09e-07!9;UBERON:0006554!5.67e-07!44;UBERON:0000072!6.09e-07!46;UBERON:0001048!6.46e-07!168;UBERON:0001007!6.50e-07!155;UBERON:0001555!6.50e-07!155;UBERON:0007026!6.50e-07!155;UBERON:0004211!9.14e-07!16;UBERON:0001285!9.14e-07!16;UBERON:0007684!9.14e-07!16;UBERON:0003220!9.14e-07!16;UBERON:0004208!9.14e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;9.17e-09;37!UBERON:0006554;5.91e-08;30!UBERON:0001008;5.91e-08;30!UBERON:0001737;2.06e-07;9!UBERON:0001557;2.06e-07;9!UBERON:0006555;7.72e-07;15!UBERON:0004819;7.72e-07;15!UBERON:0001285;7.72e-07;15!UBERON:0007684;7.72e-07;15!UBERON:0005911;8.95e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000072;9.17e-09;37!UBERON:0006554;5.91e-08;30!UBERON:0001008;5.91e-08;30!UBERON:0001737;2.06e-07;9!UBERON:0001557;2.06e-07;9!UBERON:0006555;7.72e-07;15!UBERON:0004819;7.72e-07;15!UBERON:0001285;7.72e-07;15!UBERON:0007684;7.72e-07;15!UBERON:0005911;8.95e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.94e-11,199;UBERON:0003104,3.95e-10,160;UBERON:0009142,3.95e-10,160;UBERON:0000119,5.02e-10,309;UBERON:0000483,1.58e-09,306;UBERON:0000490,3.33e-09,148;UBERON:0005177,4.62e-09,101;UBERON:0003914,6.00e-09,117;UBERON:0005256,2.13e-08,122;UBERON:0004119,6.68e-08,160;UBERON:0000925,6.68e-08,160;UBERON:0006595,6.68e-08,160;UBERON:0008947,1.51e-07,38;UBERON:0003258,1.51e-07,38;UBERON:0001737,2.09e-07,9;UBERON:0007503,4.15e-07,78;UBERON:0000072,5.72e-07,47;UBERON:0004211,7.49e-07,15;UBERON:0009773,7.49e-07,15;UBERON:0001231,7.49e-07,15;UBERON:0001285,7.49e-07,15;UBERON:0007684,7.49e-07,15;UBERON:0004208,7.49e-07,15 | |||
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| ||
|short_description=p1@UCK2 | |short_description=p1@UCK2 | ||
}} | }} |
Revision as of 17:34, 18 November 2012
Short description: | p1@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UCK2_5end |
Coexpression cluster: | C2540_small_neuroblastoma_nonsmall_Urothelial_colon_anaplastic_Smooth |
Association with transcript: | -29bp_to_uc001gdp.2, uc010plb.1_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.22e-35 | 253 |
embryonic cell | 8.86e-23 | 250 |
squamous epithelial cell | 3.98e-11 | 63 |
mesodermal cell | 4.44e-10 | 121 |
fibroblast | 1.71e-07 | 76 |
epithelial cell of nephron | 7.49e-07 | 15 |
endodermal cell | 9.61e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.94e-11 | 199 |
mesenchyme | 3.95e-10 | 160 |
entire embryonic mesenchyme | 3.95e-10 | 160 |
cell layer | 5.02e-10 | 309 |
epithelium | 1.58e-09 | 306 |
unilaminar epithelium | 3.33e-09 | 148 |
trunk region element | 4.62e-09 | 101 |
epithelial tube | 6.00e-09 | 117 |
trunk mesenchyme | 2.13e-08 | 122 |
endoderm-derived structure | 6.68e-08 | 160 |
endoderm | 6.68e-08 | 160 |
presumptive endoderm | 6.68e-08 | 160 |
respiratory primordium | 1.51e-07 | 38 |
endoderm of foregut | 1.51e-07 | 38 |
larynx | 2.09e-07 | 9 |
epithelial vesicle | 4.15e-07 | 78 |
segment of respiratory tract | 5.72e-07 | 47 |
nephron epithelium | 7.49e-07 | 15 |
renal tubule | 7.49e-07 | 15 |
nephron tubule | 7.49e-07 | 15 |
nephron | 7.49e-07 | 15 |
uriniferous tubule | 7.49e-07 | 15 |
nephrogenic mesenchyme | 7.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.59e-27 | 235 |
disease of cellular proliferation | 1.63e-26 | 239 |
cell type cancer | 1.14e-19 | 143 |
carcinoma | 1.02e-16 | 106 |
organ system cancer | 1.89e-08 | 137 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.