FFCP PHASE1:Hg19::chr11:114466397..114466426,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.93e-26;1!UBERON:0006298;7.62e-26;1!UBERON:0008801;9.79e-26;1 | |ontology_enrichment_development_v019=UBERON:0001045;5.93e-26;1!UBERON:0006298;7.62e-26;1!UBERON:0008801;9.79e-26;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;3.01e-56;11!UBERON:0001829;1.09e-49;2!UBERON:0001155;1.63e-44;9!UBERON:0004921;4.56e-44;33!UBERON:0001044;1.95e-37;6!UBERON:0003293;1.95e-37;6!UBERON:0003294;1.95e-37;6!UBERON:0010047;1.95e-37;6!UBERON:0003408;1.95e-37;6!UBERON:0000167;1.95e-37;6!UBERON:0000160;1.38e-34;17!UBERON:0005409;3.61e-27;22!UBERON:0001154;5.93e-26;1!UBERON:0001153;5.93e-26;1!UBERON:0009854;5.93e-26;1!UBERON:0001736;7.62e-26;1!UBERON:0001831;9.79e-26;1!UBERON:0001567;9.79e-26;1!UBERON:0004907;1.34e-20;5!UBERON:0001555;7.54e-18;54!UBERON:0001041;1.56e-16;14!UBERON:0001007;4.13e-14;81!UBERON:0004089;1.37e-13;2!UBERON:0000161;2.24e-12;19!UBERON:0000166;2.24e-12;19!UBERON:0000165;1.30e-08;28!UBERON:0002365;1.09e-07;31!UBERON:0002330;1.09e-07;31!UBERON:0009856;1.69e-07;4!UBERON:0001052;2.04e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000059;3.01e-56;11!UBERON:0001829;1.09e-49;2!UBERON:0001155;1.63e-44;9!UBERON:0004921;4.56e-44;33!UBERON:0001044;1.95e-37;6!UBERON:0003293;1.95e-37;6!UBERON:0003294;1.95e-37;6!UBERON:0010047;1.95e-37;6!UBERON:0003408;1.95e-37;6!UBERON:0000167;1.95e-37;6!UBERON:0000160;1.38e-34;17!UBERON:0005409;3.61e-27;22!UBERON:0001154;5.93e-26;1!UBERON:0001153;5.93e-26;1!UBERON:0009854;5.93e-26;1!UBERON:0001736;7.62e-26;1!UBERON:0001831;9.79e-26;1!UBERON:0001567;9.79e-26;1!UBERON:0004907;1.34e-20;5!UBERON:0001555;7.54e-18;54!UBERON:0001041;1.56e-16;14!UBERON:0001007;4.13e-14;81!UBERON:0004089;1.37e-13;2!UBERON:0000161;2.24e-12;19!UBERON:0000166;2.24e-12;19!UBERON:0000165;1.30e-08;28!UBERON:0002365;1.09e-07;31!UBERON:0002330;1.09e-07;31!UBERON:0009856;1.69e-07;4!UBERON:0001052;2.04e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,3.01e-56,11;UBERON:0001829,1.09e-49,2;UBERON:0001155,1.63e-44,9;UBERON:0001044,1.95e-37,6;UBERON:0003293,1.95e-37,6;UBERON:0003294,1.95e-37,6;UBERON:0010047,1.95e-37,6;UBERON:0000167,1.95e-37,6;UBERON:0000160,1.38e-34,17;UBERON:0001154,5.93e-26,1;UBERON:0001153,5.93e-26,1;UBERON:0001045,5.93e-26,1;UBERON:0001736,7.62e-26,1;UBERON:0006298,7.62e-26,1;UBERON:0001831,9.79e-26,1;UBERON:0001567,9.79e-26,1;UBERON:0008801,9.79e-26,1;UBERON:0005409,4.40e-24,25;UBERON:0003408,8.04e-23,10;UBERON:0004907,1.34e-20,5;UBERON:0004089,1.37e-13,2;UBERON:0004921,2.56e-13,118;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0000166,8.77e-11,22;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000165,2.45e-08,29;UBERON:0000930,2.45e-08,29;UBERON:0007023,6.48e-08,114;UBERON:0002365,7.71e-08,31;UBERON:0002330,7.71e-08,31;UBERON:0001052,2.04e-07,4;UBERON:0011216,6.23e-07,223;UBERON:0000161,7.83e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,22.9315649890853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8010011052972,29.721741673122,58.658893913628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4168975702865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,25.3834141703964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0555249191589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,22.9315649890853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8010011052972,29.721741673122,58.658893913628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4168975702865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,25.3834141703964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0555249191589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@FAM55D | |short_description=p2@FAM55D | ||
}} | }} |
Revision as of 19:07, 18 November 2012
Short description: | p2@FAM55D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FAM55D_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 45bp_to_ENST00000424261_5end |
EntrezGene: | FAM55D |
HGNC: | 23117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 3.01e-56 | 11 |
major salivary gland | 1.09e-49 | 2 |
colon | 1.63e-44 | 9 |
saliva-secreting gland | 1.95e-37 | 6 |
gland of oral region | 1.95e-37 | 6 |
gland of foregut | 1.95e-37 | 6 |
oral gland | 1.95e-37 | 6 |
oral cavity | 1.95e-37 | 6 |
intestine | 1.38e-34 | 17 |
vermiform appendix | 5.93e-26 | 1 |
caecum | 5.93e-26 | 1 |
midgut | 5.93e-26 | 1 |
submandibular gland | 7.62e-26 | 1 |
submandibular gland primordium | 7.62e-26 | 1 |
parotid gland | 9.79e-26 | 1 |
cheek | 9.79e-26 | 1 |
parotid gland primordium | 9.79e-26 | 1 |
gastrointestinal system | 4.40e-24 | 25 |
gland of gut | 8.04e-23 | 10 |
lower digestive tract | 1.34e-20 | 5 |
midface | 1.37e-13 | 2 |
subdivision of digestive tract | 2.56e-13 | 118 |
digestive system | 7.53e-11 | 145 |
digestive tract | 7.53e-11 | 145 |
primitive gut | 7.53e-11 | 145 |
oral opening | 8.77e-11 | 22 |
endoderm-derived structure | 7.84e-10 | 160 |
endoderm | 7.84e-10 | 160 |
presumptive endoderm | 7.84e-10 | 160 |
mouth | 2.45e-08 | 29 |
stomodeum | 2.45e-08 | 29 |
adult organism | 6.48e-08 | 114 |
exocrine gland | 7.71e-08 | 31 |
exocrine system | 7.71e-08 | 31 |
rectum | 2.04e-07 | 4 |
organ system subdivision | 6.23e-07 | 223 |
orifice | 7.83e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.