FFCP PHASE1:Hg19::chr1:156308018..156308101,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.90e-27!254;CL:0002321!1.32e-23!248;CL:0000220!6.20e-23!246;CL:0000548!1.55e-21!679;CL:0000004!1.55e-21!679;CL:0000255!1.55e-21!679;CL:0000012!7.81e-21!682;CL:0000055!4.33e-13!180;CL:0000003!4.31e-11!722;CL:0000222!1.61e-10!119;CL:0000076!2.65e-10!62;CL:0000221!1.41e-08!71;CL:0000144!5.22e-08!625;CL:0002139!1.90e-07!24;CL:0000333!7.21e-07!41;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.90e-27!254;CL:0002321!1.32e-23!248;CL:0000220!6.20e-23!246;CL:0000548!1.55e-21!679;CL:0000004!1.55e-21!679;CL:0000255!1.55e-21!679;CL:0000012!7.81e-21!682;CL:0000055!4.33e-13!180;CL:0000003!4.31e-11!722;CL:0000222!1.61e-10!119;CL:0000076!2.65e-10!62;CL:0000221!1.41e-08!71;CL:0000144!5.22e-08!625;CL:0002139!1.90e-07!24;CL:0000333!7.21e-07!41;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.93e-07;24!CL:0000071;8.78e-07;18 | |ontology_enrichment_celltype_v019=CL:0002139;1.93e-07;24!CL:0000071;8.78e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-27,253;CL:0002321,1.77e-23,250;CL:0000076,2.16e-10,63;CL:0000222,2.23e-10,121;CL:0000221,1.13e-08,72;CL:0002139,1.90e-07,24;CL:0000333,7.21e-07,41;CL:0000071,8.64e-07,18;CL:0002546,8.64e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;8.78e-07;18 | |ontology_enrichment_development_v019=CL:0002546;8.78e-07;18 | ||
|ontology_enrichment_disease=DOID:14566!9.99e-35!239;DOID:162!2.49e-33!235;DOID:0050687!3.23e-19!143;DOID:305!7.59e-16!106;DOID:0050686!1.44e-13!137;DOID:2531!6.68e-08!51;DOID:0060083!6.68e-08!51 | |ontology_enrichment_disease=DOID:14566!9.99e-35!239;DOID:162!2.49e-33!235;DOID:0050687!3.23e-19!143;DOID:305!7.59e-16!106;DOID:0050686!1.44e-13!137;DOID:2531!6.68e-08!51;DOID:0060083!6.68e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,9.99e-35,239;DOID:162,2.49e-33,235;DOID:0050687,3.23e-19,143;DOID:305,7.59e-16,106;DOID:0050686,1.44e-13,137;DOID:2531,6.68e-08,51;DOID:0060083,6.68e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.82e-09!69;UBERON:0001637!2.04e-09!42;UBERON:0003509!2.04e-09!42;UBERON:0004572!2.04e-09!42;UBERON:0002049!4.25e-09!79;UBERON:0007798!4.25e-09!79;UBERON:0000490!1.17e-08!138;UBERON:0001981!1.61e-08!60;UBERON:0007500!1.61e-08!60;UBERON:0004537!1.61e-08!60;UBERON:0006965!1.61e-08!60;UBERON:0003104!3.90e-08!238;UBERON:0009142!3.90e-08!238;UBERON:0000487!7.13e-08!22;UBERON:0000072!1.23e-07!46;UBERON:0008947!1.47e-07!38;UBERON:0003258!1.47e-07!38;UBERON:0001737!1.98e-07!9;UBERON:0003914!3.80e-07!118;UBERON:0006914!4.32e-07!25;UBERON:0004872!5.61e-07!84;UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18 | |ontology_enrichment_uberon=UBERON:0000055!1.82e-09!69;UBERON:0001637!2.04e-09!42;UBERON:0003509!2.04e-09!42;UBERON:0004572!2.04e-09!42;UBERON:0002049!4.25e-09!79;UBERON:0007798!4.25e-09!79;UBERON:0000490!1.17e-08!138;UBERON:0001981!1.61e-08!60;UBERON:0007500!1.61e-08!60;UBERON:0004537!1.61e-08!60;UBERON:0006965!1.61e-08!60;UBERON:0003104!3.90e-08!238;UBERON:0009142!3.90e-08!238;UBERON:0000487!7.13e-08!22;UBERON:0000072!1.23e-07!46;UBERON:0008947!1.47e-07!38;UBERON:0003258!1.47e-07!38;UBERON:0001737!1.98e-07!9;UBERON:0003914!3.80e-07!118;UBERON:0006914!4.32e-07!25;UBERON:0004872!5.61e-07!84;UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;7.24e-08;22!UBERON:0000072;8.76e-08;37!UBERON:0000490;1.78e-07;33!UBERON:0001737;1.98e-07;9!UBERON:0001557;1.98e-07;9!UBERON:0001637;2.69e-07;42!UBERON:0003509;2.69e-07;42!UBERON:0004572;2.69e-07;42!UBERON:0006914;4.37e-07;25!UBERON:0004638;8.78e-07;18!UBERON:0001986;8.78e-07;18!UBERON:0004852;8.78e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0000487;7.24e-08;22!UBERON:0000072;8.76e-08;37!UBERON:0000490;1.78e-07;33!UBERON:0001737;1.98e-07;9!UBERON:0001557;1.98e-07;9!UBERON:0001637;2.69e-07;42!UBERON:0003509;2.69e-07;42!UBERON:0004572;2.69e-07;42!UBERON:0006914;4.37e-07;25!UBERON:0004638;8.78e-07;18!UBERON:0001986;8.78e-07;18!UBERON:0004852;8.78e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.32e-10,68;UBERON:0000490,1.72e-09,148;UBERON:0002049,1.88e-09,78;UBERON:0007798,1.88e-09,78;UBERON:0001637,2.04e-09,42;UBERON:0003509,2.04e-09,42;UBERON:0004572,2.04e-09,42;UBERON:0007500,6.38e-09,59;UBERON:0001981,6.38e-09,59;UBERON:0004537,6.38e-09,59;UBERON:0006965,6.38e-09,59;UBERON:0000487,7.13e-08,22;UBERON:0008947,1.47e-07,38;UBERON:0003258,1.47e-07,38;UBERON:0001737,1.98e-07,9;UBERON:0003914,2.27e-07,117;UBERON:0004872,2.95e-07,83;UBERON:0000072,3.08e-07,47;UBERON:0006914,4.32e-07,25;UBERON:0004638,8.64e-07,18;UBERON:0001986,8.64e-07,18;UBERON:0004852,8.64e-07,18 | |||
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207.407814520192 | ||
|short_description=p1@CCT3 | |short_description=p1@CCT3 | ||
}} | }} |
Revision as of 07:14, 19 November 2012
Short description: | p1@CCT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCT3_5end |
Coexpression cluster: | C3873_neuroblastoma_nonsmall_teratocarcinoma_acute_neuroectodermal_medulloblastoma_small |
Association with transcript: | 0bp_to_ENST00000368256, ENST00000368258, ENST00000368259, ENST00000368261, ENST00000368262, ENST00000472765, ENST00000478640, ENST00000496684, ENST00000533194_5end |
EntrezGene: | CCT3 |
HGNC: | 1616 |
UniProt: | E9PRN0P49368E9PRM9B4DUR8E9PM09E9PRC8E9PQ35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.21e-27 | 253 |
embryonic cell | 1.77e-23 | 250 |
squamous epithelial cell | 2.16e-10 | 63 |
mesodermal cell | 2.23e-10 | 121 |
ectodermal cell | 1.13e-08 | 72 |
endothelial cell of vascular tree | 1.90e-07 | 24 |
migratory neural crest cell | 7.21e-07 | 41 |
blood vessel endothelial cell | 8.64e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.64e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vessel | 7.32e-10 | 68 |
unilaminar epithelium | 1.72e-09 | 148 |
vasculature | 1.88e-09 | 78 |
vascular system | 1.88e-09 | 78 |
artery | 2.04e-09 | 42 |
arterial blood vessel | 2.04e-09 | 42 |
arterial system | 2.04e-09 | 42 |
epithelial tube open at both ends | 6.38e-09 | 59 |
blood vessel | 6.38e-09 | 59 |
blood vasculature | 6.38e-09 | 59 |
vascular cord | 6.38e-09 | 59 |
simple squamous epithelium | 7.13e-08 | 22 |
respiratory primordium | 1.47e-07 | 38 |
endoderm of foregut | 1.47e-07 | 38 |
larynx | 1.98e-07 | 9 |
epithelial tube | 2.27e-07 | 117 |
splanchnic layer of lateral plate mesoderm | 2.95e-07 | 83 |
segment of respiratory tract | 3.08e-07 | 47 |
squamous epithelium | 4.32e-07 | 25 |
blood vessel endothelium | 8.64e-07 | 18 |
endothelium | 8.64e-07 | 18 |
cardiovascular system endothelium | 8.64e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.99e-35 | 239 |
cancer | 2.49e-33 | 235 |
cell type cancer | 3.23e-19 | 143 |
carcinoma | 7.59e-16 | 106 |
organ system cancer | 1.44e-13 | 137 |
hematologic cancer | 6.68e-08 | 51 |
immune system cancer | 6.68e-08 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.