FFCP PHASE1:Hg19::chr10:30132189..30132193,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.70e-40;1!UBERON:0009847;1.96e-14;3!UBERON:0003353;1.96e-14;3!UBERON:0006603;1.53e-11;65 | |ontology_enrichment_development_v019=UBERON:0004874;2.70e-40;1!UBERON:0009847;1.96e-14;3!UBERON:0003353;1.96e-14;3!UBERON:0006603;1.53e-11;65 | ||
|ontology_enrichment_disease=DOID:114!7.61e-17!2;DOID:178!3.83e-09!1;DOID:326!3.83e-09!1;DOID:3978!3.83e-09!1;DOID:3394!3.83e-09!1;DOID:5844!3.83e-09!1;DOID:1287!7.00e-09!4 | |ontology_enrichment_disease=DOID:114!7.61e-17!2;DOID:178!3.83e-09!1;DOID:326!3.83e-09!1;DOID:3978!3.83e-09!1;DOID:3394!3.83e-09!1;DOID:5844!3.83e-09!1;DOID:1287!7.00e-09!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-24!115;UBERON:0001000!7.98e-10!1;UBERON:0005352!7.98e-10!1;UBERON:0000989!1.03e-09!1;UBERON:0008811!1.03e-09!1;UBERON:0006258!1.03e-09!1;UBERON:0005876!1.03e-09!1;UBERON:0004874!1.03e-09!1;UBERON:0000996!1.43e-09!1;UBERON:0002146!1.84e-09!1;UBERON:0005623!1.84e-09!1;UBERON:0006834!4.15e-09!1;UBERON:0007100!3.56e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!1.56e-24!115;UBERON:0001000!7.98e-10!1;UBERON:0005352!7.98e-10!1;UBERON:0000989!1.03e-09!1;UBERON:0008811!1.03e-09!1;UBERON:0006258!1.03e-09!1;UBERON:0005876!1.03e-09!1;UBERON:0004874!1.03e-09!1;UBERON:0000996!1.43e-09!1;UBERON:0002146!1.84e-09!1;UBERON:0005623!1.84e-09!1;UBERON:0006834!4.15e-09!1;UBERON:0007100!3.56e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;9.91e-41;1!UBERON:0005352;9.91e-41;1!UBERON:0000989;2.70e-40;1!UBERON:0008811;2.70e-40;1!UBERON:0001255;3.81e-21;2!UBERON:0001556;3.81e-21;2!UBERON:0003101;6.04e-17;22!UBERON:0000079;6.04e-17;22!UBERON:0003135;2.09e-15;11!UBERON:0006947;1.40e-14;3!UBERON:0004054;1.40e-14;3!UBERON:0005904;2.80e-11;4!UBERON:0000077;7.13e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0001000;9.91e-41;1!UBERON:0005352;9.91e-41;1!UBERON:0000989;2.70e-40;1!UBERON:0008811;2.70e-40;1!UBERON:0001255;3.81e-21;2!UBERON:0001556;3.81e-21;2!UBERON:0003101;6.04e-17;22!UBERON:0000079;6.04e-17;22!UBERON:0003135;2.09e-15;11!UBERON:0006947;1.40e-14;3!UBERON:0004054;1.40e-14;3!UBERON:0005904;2.80e-11;4!UBERON:0000077;7.13e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,6.62e-41,1;UBERON:0005352,6.62e-41,1;UBERON:0000989,2.21e-40,1;UBERON:0008811,2.21e-40,1;UBERON:0006258,2.21e-40,1;UBERON:0005876,2.21e-40,1;UBERON:0004874,2.21e-40,1;UBERON:0001255,3.81e-21,2;UBERON:0001556,3.81e-21,2;UBERON:0003101,5.72e-17,22;UBERON:0000079,5.72e-17,22;UBERON:0003135,1.88e-15,11;UBERON:0006947,1.22e-14,3;UBERON:0004054,1.22e-14,3;UBERON:0003064,1.66e-13,28;UBERON:0000162,2.51e-12,14;UBERON:0001353,2.51e-12,14;UBERON:0000163,2.51e-12,14;UBERON:0006866,2.51e-12,14;UBERON:0000164,2.51e-12,14;UBERON:0000931,2.51e-12,14;UBERON:0004122,1.42e-11,15;UBERON:0005904,2.53e-11,4;UBERON:0001046,2.36e-09,19;UBERON:0007023,2.58e-09,114;UBERON:0005156,8.00e-07,59;UBERON:0000990,8.00e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,2.36744173528641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02041020705668,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,2.36744173528641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02041020705668,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p@chr10:30132189..30132193,- | |short_description=p@chr10:30132189..30132193,- | ||
}} | }} |
Revision as of 05:30, 20 November 2012
Short description: | p@chr10:30132189..30132193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:30132189..30132193, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 6.62e-41 | 1 |
spermatic cord | 6.62e-41 | 1 |
penis | 2.21e-40 | 1 |
intromittent organ | 2.21e-40 | 1 |
lateral plate mesenchyme | 2.21e-40 | 1 |
undifferentiated genital tubercle | 2.21e-40 | 1 |
somatopleure | 2.21e-40 | 1 |
urinary bladder | 3.81e-21 | 2 |
lower urinary tract | 3.81e-21 | 2 |
male organism | 5.72e-17 | 22 |
male reproductive system | 5.72e-17 | 22 |
male reproductive organ | 1.88e-15 | 11 |
male genital duct | 1.22e-14 | 3 |
internal male genitalia | 1.22e-14 | 3 |
intermediate mesoderm | 1.66e-13 | 28 |
cloaca | 2.51e-12 | 14 |
anal region | 2.51e-12 | 14 |
embryonic cloaca | 2.51e-12 | 14 |
terminal part of digestive tract | 2.51e-12 | 14 |
primitive urogenital sinus | 2.51e-12 | 14 |
proctodeum | 2.51e-12 | 14 |
genitourinary system | 1.42e-11 | 15 |
duct of male reproductive system | 2.53e-11 | 4 |
hindgut | 2.36e-09 | 19 |
adult organism | 2.58e-09 | 114 |
reproductive structure | 8.00e-07 | 59 |
reproductive system | 8.00e-07 | 59 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.