FFCP PHASE1:Hg19::chr11:8643189..8643192,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;9.07e-18;2!CL:0002593;9.07e-18;2!CL:0002577;2.59e-12;3!CL:0002595;6.55e-08;5 | |ontology_enrichment_celltype_v019=CL:0002363;9.07e-18;2!CL:0002593;9.07e-18;2!CL:0002577;2.59e-12;3!CL:0002595;6.55e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.07e-17,2;CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2;CL:0002577,2.07e-12,3;CL:0002595,7.01e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000008;9.07e-18;2!UBERON:0007297;9.07e-18;2 | |ontology_enrichment_development_v019=CL:0000008;9.07e-18;2!UBERON:0007297;9.07e-18;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.05e-34;1!UBERON:0007195;5.05e-34;1!UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0003135;4.52e-13;11!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0001987;1.44e-09;4!UBERON:0005904;1.44e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.05e-34;1!UBERON:0007195;5.05e-34;1!UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0003135;4.52e-13;11!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0001987;1.44e-09;4!UBERON:0005904;1.44e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.61e-34,1;UBERON:0007195,5.05e-34,1;UBERON:0002456,1.07e-17,2;UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0003135,4.25e-13,11;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4;UBERON:0005904,1.32e-09,4;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0003834,7.01e-08,5;UBERON:0001533,7.01e-08,5;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22;UBERON:0003133,5.76e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,1.39781334593624,0,0,0,0,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.363996435361,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,1.39781334593624,0,0,0,0,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.363996435361,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:8643189..8643192,- | |short_description=p@chr11:8643189..8643192,- | ||
}} | }} |
Revision as of 19:06, 20 November 2012
Short description: | p@chr11:8643189..8643192, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:8643189..8643192, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.07e-17 | 2 |
keratocyte | 1.27e-17 | 2 |
migratory cranial neural crest cell | 1.27e-17 | 2 |
placental epithelial cell | 2.07e-12 | 3 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.61e-34 | 1 |
stroma of bone marrow | 5.05e-34 | 1 |
internal thoracic artery | 1.07e-17 | 2 |
head connective tissue | 1.27e-17 | 2 |
substantia propria of cornea | 1.27e-17 | 2 |
male reproductive organ | 4.25e-13 | 11 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
duct of male reproductive system | 1.32e-09 | 4 |
stroma | 1.70e-09 | 4 |
cornea | 1.70e-09 | 4 |
eye surface | 1.70e-09 | 4 |
optic eminence | 1.70e-09 | 4 |
corneal primordium | 1.70e-09 | 4 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |
reproductive organ | 5.76e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.