FFCP PHASE1:Hg19::chr2:25391657..25391666,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.10e-26!5;CL:0000039!1.39e-19!7;CL:0000586!1.39e-19!7;CL:0002541!5.28e-12!3 | |ontology_enrichment_celltype=CL:0002322!1.10e-26!5;CL:0000039!1.39e-19!7;CL:0000586!1.39e-19!7;CL:0002541!5.28e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.26e-08;7!CL:0000586;2.26e-08;7 | |ontology_enrichment_celltype_v019=CL:0000039;2.26e-08;7!CL:0000586;2.26e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.59e-18!2;UBERON:0003135!1.82e-12!11;UBERON:0000476!5.28e-12!3;UBERON:0000920!5.28e-12!3;UBERON:0003124!2.67e-11!7;UBERON:0000473!4.37e-10!8;UBERON:0005631!9.67e-10!14;UBERON:0000158!9.67e-10!14;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0001301!1.15e-09!1;UBERON:0003101!2.25e-09!22;UBERON:0000079!2.25e-09!22 | |ontology_enrichment_uberon=UBERON:0000007!1.59e-18!2;UBERON:0003135!1.82e-12!11;UBERON:0000476!5.28e-12!3;UBERON:0000920!5.28e-12!3;UBERON:0003124!2.67e-11!7;UBERON:0000473!4.37e-10!8;UBERON:0005631!9.67e-10!14;UBERON:0000158!9.67e-10!14;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0001301!1.15e-09!1;UBERON:0003101!2.25e-09!22;UBERON:0000079!2.25e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0002780;9.68e-11;41!UBERON:0001890;9.68e-11;41!UBERON:0001871;2.26e-08;6!UBERON:0000473;1.75e-07;8!UBERON:0000073;7.34e-07;53!UBERON:0002616;7.34e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0000007;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0002780;9.68e-11;41!UBERON:0001890;9.68e-11;41!UBERON:0001871;2.26e-08;6!UBERON:0000473;1.75e-07;8!UBERON:0000073;7.34e-07;53!UBERON:0002616;7.34e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0002780,1.56e-11,41;UBERON:0001890,1.56e-11,41;UBERON:0003080,1.56e-11,41;UBERON:0006240,1.56e-11,41;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0001871,2.18e-08,6;UBERON:0003056,4.28e-08,61;UBERON:0000473,1.80e-07,8;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p14@POMC | |short_description=p14@POMC | ||
}} | }} |
Revision as of 01:51, 21 November 2012
Short description: | p14@POMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_POMC_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -98bp_to_ENST00000380794, NM_000939, NM_001035256, uc002rfy.1, uc002rfz.1, uc002rga.1_5end |
EntrezGene: | POMC |
HGNC: | 9201 |
UniProt: | P01189Q53T23Q6FHC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
regional part of forebrain | 1.56e-11 | 41 |
forebrain | 1.56e-11 | 41 |
anterior neural tube | 1.56e-11 | 41 |
future forebrain | 1.56e-11 | 41 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
temporal lobe | 2.18e-08 | 6 |
pre-chordal neural plate | 4.28e-08 | 61 |
testis | 1.80e-07 | 8 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
endocrine gland | 9.98e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.