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CAGE peaks (TSS regions) are grouped based on expression, by using MCL
CAGE peaks (TSS regions) are grouped based on expression, by using MCL
     </td>
     </td>
     <td>
     <td> [[Coexpression_cluster:C18|C18 (in human)]] </td>
{{#ask:[[Category:Coexpression clusters]]
| limit=3
| format=ul
| searchlabel=
| order=random
}}
    </td>
     <td>
     <td>
[[Browse_coexpression_clusters|Human]]
[[Browse_coexpression_clusters|Human]]
[[Browse_MCL_coexpression_mouse|Mouse]]
[[Browse_MCL_coexpression_mouse|Mouse]]
</td>
</td>

Revision as of 19:43, 22 November 2012

FANTOM5 SSTAR (Semantic catalog of Samples, Transcription initiation And Regulators) provide a way to explore samples, transcriptional initiations, and regulators analyzed in the FANTOM5 project


Gene Search
Examples Browse
Samples Details of profiled samples (incl. primary cells, cell lines, and tissues)

Samples by name

Samples by categories

Samples by series

Samples by data type

Co-expression

CAGE peaks (TSS regions) are grouped based on expression, by using MCL

C18 (in human)

Human Mouse

MOTIFs

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MacroAPE

Swissregulon

Genes

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Genes

TSSs

TFs

Ontologies

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FANTOM5 (FF)

Cell Type (CL)

Disease (DOID)

Anatomy (UBERON)