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Coexpression cluster:C52: Difference between revisions

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|tfbs_overrepresentation_for_novel_motifs=0.000164241,0.000191305,0.0028864,4.58184,2.22895,0.946501,0.0129191,0.935269,0.0625594,5.14706e-11,0.000694062,0.416992,0.0194744,0.10463,1.65145,0.430427,0.0062065,3.22118,0.0280085,0.429436,1.22748,0.00577115,0.0460191,4.16066,0.0078842,0.0435557,0.245964,0.044003,0.00205056,0.0425734,0.0458276,0.070849,0.000176914,0.0683476,0.010739,0.00166736,2.06518e-07,0.0860381,1.57357,3.06404e-07,0.715293,0.000161808,0.710378,0.899996,0.011623,0.00881747,0.0264958,0.00289597,5.14634,0.0837285,0.0945114,0.0587578,0.148647,0.145382,0.399306,0.0219142,1.17498,0.038202,0.220119,0.000668556,0.0182734,0.013898,0.166358,0.0129542,0.0674124,19.9852,0.186646,0.387109,1.38829,0.0594381,9.18899e-05,2.65724,7.86925e-09,0.61878,6.3406e-11,0.0570271,0.326021,0.105295,1.66131,0.497062,1.017,0.450264,5.78693,1.21431,0.0228867,0,8.66321e-08,0.151964,0.416087,0.172645,1.69963,0.247986,0.780381,4.10787,3.5101e-06,1.17698,0.425186,0.125451,0.0829035,0.0544601,1.31207,0.554383,0.119453,0.172207,0.130378,2.85134e-06,0.00109175,0.215212,0.000885381,3.61742e-06,0.252906,1.2127,0.297249,0.0870131,0.237727,0.349688,2.53136e-14,0.339091,0.0836485,0.783651,0.377842,0.127475,0.0801505,2.7127,0.691637,0.0263008,0.113096,0.0143456,0.723253,0.280784,0.249121,1.11601,0.295686,0.12169,0.31676,0.000721219,0.610792,0.589756,0.106839,0.492677,1.10873,1.3831,3.70715,0.520862,0.0173027,0.187935,0.876368,0.367204,0.51442,3.76209e-06,1.49139e-05,0,1.85308,0.155289,0.269023,0.52297,0.48487,5.79967,0.0141477,6.21921e-07,0.0189292,0.368843,0.118362,2.10436,0.503472,0.437088,0.000385055,0.0775614,0
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;0.880187,MA0006.1;0.000170414,MA0007.1;0.386191,MA0009.1;0.186178,MA0014.1;0,MA0017.1;0.076465,MA0019.1;0.100613,MA0024.1;0.139213,MA0025.1;0.427785,MA0027.1;0.922808,MA0028.1;0.000403301,MA0029.1;1.62356,MA0030.1;0.149666,MA0031.1;0.86383,MA0038.1;4.57201,MA0040.1;1.08001,MA0041.1;0.388355,MA0042.1;0.763761,MA0043.1;0.318612,MA0046.1;0.085725,MA0048.1;0.00312825,MA0050.1;1.07381,MA0051.1;0.456017,MA0052.1;0.0449585,MA0055.1;0.0550993,MA0056.1;0,MA0057.1;0.000493998,MA0058.1;0.303648,MA0059.1;0.232848,MA0060.1;37.574,MA0061.1;0.78749,MA0063.1;0,MA0066.1;0.365258,MA0067.1;0.137399,MA0068.1;0.0665135,MA0069.1;2.18956,MA0070.1;1.40205,MA0071.1;1.76748,MA0072.1;1.37373,MA0073.1;0,MA0074.1;0.120158,MA0076.1;0.0110233,MA0077.1;0.242994,MA0078.1;0.388693,MA0081.1;0.0188166,MA0083.1;2.38015,MA0084.1;0.306765,MA0087.1;0.399812,MA0088.1;0.0243159,MA0089.1;0,MA0090.1;0.0449587,MA0091.1;0.0845264,MA0092.1;0.174583,MA0093.1;1.37458,MA0095.1;0,MA0098.1;0,MA0100.1;0.315586,MA0101.1;1.13271,MA0103.1;0.500328,MA0105.1;0.031255,MA0106.1;0.095216,MA0107.1;1.38747,MA0108.2;1.90634,MA0109.1;0,MA0111.1;0.0249187,MA0113.1;0.369828,MA0114.1;0.0237874,MA0115.1;0.22328,MA0116.1;0.00394802,MA0117.1;0.0551061,MA0119.1;0.351496,MA0122.1;0.287721,MA0124.1;0.17773,MA0125.1;0.389215,MA0130.1;0,MA0131.1;0.00337215,MA0132.1;0,MA0133.1;0,MA0135.1;0.385515,MA0136.1;0.392662,MA0139.1;0.000503948,MA0140.1;2.49098,MA0141.1;0.758532,MA0142.1;0.0991304,MA0143.1;0.494339,MA0144.1;0.148412,MA0145.1;5.3219e-05,MA0146.1;5.78596e-16,MA0147.1;0.160404,MA0148.1;0.0846097,MA0149.1;0.0179384,MA0062.2;0.00241009,MA0035.2;2.47974,MA0039.2;0.00777168,MA0138.2;0.190787,MA0002.2;2.33314,MA0137.2;0.949671,MA0104.2;0.0462804,MA0047.2;0.272394,MA0112.2;1.92304e-06,MA0065.2;0.000317595,MA0150.1;0.121719,MA0151.1;0,MA0152.1;0.23831,MA0153.1;0.0306959,MA0154.1;0.000444065,MA0155.1;2.97299e-07,MA0156.1;0.291922,MA0157.1;2.28046,MA0158.1;0,MA0159.1;0.0079412,MA0160.1;1.27605,MA0161.1;0,MA0162.1;0,MA0163.1;4.91209e-12,MA0164.1;1.30091,MA0080.2;0.361789,MA0018.2;0.0971146,MA0099.2;1.59156,MA0079.2;0,MA0102.2;0.348288,MA0258.1;0.0171418,MA0259.1;0.0174535,MA0442.1;0
}}
}}

Revision as of 18:10, 22 January 2013


Full id: C52_adult_NK_chronic_cord_testis_embryonic_myeloma



Phase1 CAGE Peaks

Hg19::chr10:112189408..112189426,+p@chr10:112189408..112189426
+
Hg19::chr10:19239967..19239971,-p@chr10:19239967..19239971
-
Hg19::chr10:27660545..27660551,+p@chr10:27660545..27660551
+
Hg19::chr10:3094259..3094288,+p@chr10:3094259..3094288
+
Hg19::chr10:34637963..34637998,-p@chr10:34637963..34637998
-
Hg19::chr10:38027223..38027230,+p@chr10:38027223..38027230
+
Hg19::chr10:6104459..6104475,-p3@IL2RA
Hg19::chr10:6104480..6104485,-p5@IL2RA
Hg19::chr10:6104492..6104499,-p4@IL2RA
Hg19::chr10:73479737..73479747,-p3@C10orf105
Hg19::chr11:103213136..103213143,+p@chr11:103213136..103213143
+
Hg19::chr11:119986286..119986297,-p@chr11:119986286..119986297
-
Hg19::chr11:119991638..119991645,-p61@TRIM29
Hg19::chr11:46193466..46193478,+p1@ENST00000533793
Hg19::chr12:131856861..131856875,+p@chr12:131856861..131856875
+
Hg19::chr12:30993607..30993610,-p@chr12:30993607..30993610
-
Hg19::chr12:38493344..38493353,+p@chr12:38493344..38493353
+
Hg19::chr12:49158521..49158560,+p@chr12:49158521..49158560
+
Hg19::chr12:92455709..92455717,-p@chr12:92455709..92455717
-
Hg19::chr13:110586184..110586198,-p@chr13:110586184..110586198
-
Hg19::chr13:110617261..110617267,+p@chr13:110617261..110617267
+
Hg19::chr13:110645796..110645802,+p@chr13:110645796..110645802
+
Hg19::chr13:110707570..110707589,-p@chr13:110707570..110707589
-
Hg19::chr13:110709644..110709665,-p@chr13:110709644..110709665
-
Hg19::chr13:110709672..110709683,-p@chr13:110709672..110709683
-
Hg19::chr13:111616788..111616817,+p@chr13:111616788..111616817
+
Hg19::chr13:111668995..111669008,+p@chr13:111668995..111669008
+
Hg19::chr13:26150348..26150390,+p@chr13:26150348..26150390
+
Hg19::chr13:26312285..26312294,+p@chr13:26312285..26312294
+
Hg19::chr13:51677021..51677026,-p@chr13:51677021..51677026
-
Hg19::chr13:51685054..51685062,+p@chr13:51685054..51685062
+
Hg19::chr13:51685075..51685085,+p@chr13:51685075..51685085
+
Hg19::chr13:63632805..63632810,-p@chr13:63632805..63632810
-
Hg19::chr14:104617506..104617582,+p@chr14:104617506..104617582
+
Hg19::chr14:21578189..21578193,+p@chr14:21578189..21578193
+
Hg19::chr14:22538811..22538825,+p1@TRAV22
Hg19::chr14:22538852..22538859,+p3@TRAV22
Hg19::chr14:22538863..22538874,+p2@uc001wcy.2
Hg19::chr14:22538896..22538915,+p1@uc001wcy.2
Hg19::chr14:22538931..22538943,+p2@TRAV22
Hg19::chr14:22591032..22591043,+p1@TRAV26-1
Hg19::chr14:92973731..92973751,-p@chr14:92973731..92973751
-
Hg19::chr14:93095766..93095768,-p@chr14:93095766..93095768
-
Hg19::chr14:93366565..93366568,-p@chr14:93366565..93366568
-
Hg19::chr15:29978971..29978978,+p@chr15:29978971..29978978
+
Hg19::chr15:30010696..30010715,-p@chr15:30010696..30010715
-
Hg19::chr15:30010739..30010760,-p@chr15:30010739..30010760
-
Hg19::chr15:30010762..30010785,-p@chr15:30010762..30010785
-
Hg19::chr15:30010863..30010881,-p@chr15:30010863..30010881
-
Hg19::chr15:47588167..47588193,-p@chr15:47588167..47588193
-
Hg19::chr15:47588212..47588225,-p@chr15:47588212..47588225
-
Hg19::chr15:68188457..68188465,+p@chr15:68188457..68188465
+
Hg19::chr15:70885610..70885622,+p@chr15:70885610..70885622
+
Hg19::chr15:71506595..71506599,+p@chr15:71506595..71506599
+
Hg19::chr15:74632581..74632587,-p@chr15:74632581..74632587
-
Hg19::chr15:81706926..81706931,+p@chr15:81706926..81706931
+
Hg19::chr15:93253904..93253907,-p@chr15:93253904..93253907
-
Hg19::chr15:99670119..99670130,+p@chr15:99670119..99670130
+
Hg19::chr15:99696483..99696527,-p6@TTC23
Hg19::chr16:23505713..23505725,-p@chr16:23505713..23505725
-
Hg19::chr16:89584495..89584539,+p@chr16:89584495..89584539
+
Hg19::chr17:12791792..12791805,+p@chr17:12791792..12791805
+
Hg19::chr17:12791814..12791823,+p@chr17:12791814..12791823
+
Hg19::chr17:12796834..12796843,+p@chr17:12796834..12796843
+
Hg19::chr17:12796847..12796852,+p@chr17:12796847..12796852
+
Hg19::chr17:12799691..12799699,+p@chr17:12799691..12799699
+
Hg19::chr17:12799705..12799718,+p@chr17:12799705..12799718
+
Hg19::chr17:15048765..15048797,+p@chr17:15048765..15048797
+
Hg19::chr17:20985587..20985592,+p@chr17:20985587..20985592
+
Hg19::chr17:22069559..22069568,-p@chr17:22069559..22069568
-
Hg19::chr17:31241553..31241555,+p@chr17:31241553..31241555
+
Hg19::chr17:6918813..6918828,+p12@C17orf49
Hg19::chr17:70070930..70070937,-p@chr17:70070930..70070937
-
Hg19::chr18:12060071..12060081,+p@chr18:12060071..12060081
+
Hg19::chr18:19070148..19070196,+p@chr18:19070148..19070196
+
Hg19::chr18:21687542..21687545,+p@chr18:21687542..21687545
+
Hg19::chr18:25161980..25161984,-p@chr18:25161980..25161984
-
Hg19::chr18:25243552..25243557,-p@chr18:25243552..25243557
-
Hg19::chr18:25253411..25253416,-p@chr18:25253411..25253416
-
Hg19::chr18:26941884..26941895,-p@chr18:26941884..26941895
-
Hg19::chr18:26941900..26941909,-p@chr18:26941900..26941909
-
Hg19::chr18:26941976..26941994,-p@chr18:26941976..26941994
-
Hg19::chr18:3230742..3230747,+p@chr18:3230742..3230747
+
Hg19::chr18:40886028..40886037,+p@chr18:40886028..40886037
+
Hg19::chr18:40886039..40886048,+p@chr18:40886039..40886048
+
Hg19::chr18:40948143..40948159,+p@chr18:40948143..40948159
+
Hg19::chr18:40948160..40948172,+p@chr18:40948160..40948172
+
Hg19::chr18:45986464..45986492,+p@chr18:45986464..45986492
+
Hg19::chr18:47725835..47725856,-p@chr18:47725835..47725856
-
Hg19::chr18:47725878..47725903,-p@chr18:47725878..47725903
-
Hg19::chr18:56494810..56494816,-p@chr18:56494810..56494816
-
Hg19::chr18:69661949..69661953,-p@chr18:69661949..69661953
-
Hg19::chr18:69854903..69854906,-p@chr18:69854903..69854906
-
Hg19::chr18:69858626..69858628,-p@chr18:69858626..69858628
-
Hg19::chr18:69868107..69868111,-p@chr18:69868107..69868111
-
Hg19::chr18:69872774..69872778,-p@chr18:69872774..69872778
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Hg19::chr19:23695418..23695428,-p@chr19:23695418..23695428
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Hg19::chr19:23973420..23973429,+p1@ENST00000472297
Hg19::chr19:23973442..23973445,+p2@ENST00000472297
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Hg19::chr19:374095..374106,-p4@THEG
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Hg19::chr19:376641..376651,-p@chr19:376641..376651
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Hg19::chr19:4164438..4164440,+p@chr19:4164438..4164440
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Hg19::chr19:45231555..45231562,-p@chr19:45231555..45231562
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Hg19::chr19:756791..756838,+p@chr19:756791..756838
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Hg19::chr19:7816413..7816424,+p@chr19:7816413..7816424
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Hg19::chr19:7816457..7816480,+p@chr19:7816457..7816480
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Hg19::chr1:100915125..100915132,-p@chr1:100915125..100915132
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Hg19::chr1:14956065..14956093,+p@chr1:14956065..14956093
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Hg19::chr1:154408297..154408305,+p@chr1:154408297..154408305
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Hg19::chr1:179370897..179370904,+p@chr1:179370897..179370904
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Hg19::chr1:25883469..25883474,+p@chr1:25883469..25883474
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Hg19::chr1:29610235..29610246,+p10@PTPRU
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Hg19::chr1:34632610..34632638,+p2@C1orf94
Hg19::chr1:34662821..34662825,+p6@C1orf94
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Hg19::chr1:93054640..93054674,-p@chr1:93054640..93054674
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Hg19::chr20:4115839..4115842,+p@chr20:4115839..4115842
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Hg19::chr20:4115847..4115854,+p@chr20:4115847..4115854
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Hg19::chr20:55403726..55403730,+p@chr20:55403726..55403730
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Hg19::chr20:62666902..62666913,+p10@LINC00176
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Hg19::chr21:20852770..20852777,-p@chr21:20852770..20852777
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Hg19::chr21:20866711..20866716,+p@chr21:20866711..20866716
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Hg19::chr21:47347471..47347482,-p@chr21:47347471..47347482
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Hg19::chr21:47365834..47365846,-p@chr21:47365834..47365846
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Hg19::chr21:47365866..47365887,-p@chr21:47365866..47365887
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Hg19::chr21:47365891..47365905,-p@chr21:47365891..47365905
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Hg19::chr21:47410794..47410799,+p@chr21:47410794..47410799
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Hg19::chr21:47924311..47924326,+p2@DIP2A
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Hg19::chr22:29264564..29264568,-p@chr22:29264564..29264568
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Hg19::chr22:34270322..34270326,-p@chr22:34270322..34270326
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Hg19::chr22:34270355..34270401,-p@chr22:34270355..34270401
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Hg19::chr22:45106642..45106649,-p@chr22:45106642..45106649
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Hg19::chr22:45258957..45258993,-p@chr22:45258957..45258993
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Hg19::chr22:46016731..46016736,-p@chr22:46016731..46016736
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Hg19::chr2:127790367..127790404,+p@chr2:127790367..127790404
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Hg19::chr2:1377544..1377553,+p17@TPO
Hg19::chr2:1445829..1445833,+p@chr2:1445829..1445833
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Hg19::chr2:1500145..1500152,+p@chr2:1500145..1500152
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Hg19::chr2:1500169..1500183,+p@chr2:1500169..1500183
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Hg19::chr2:1500194..1500206,+p@chr2:1500194..1500206
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Hg19::chr2:15012923..15012956,-p@chr2:15012923..15012956
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Hg19::chr2:15013175..15013201,-p@chr2:15013175..15013201
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Hg19::chr2:1520572..1520600,+p@chr2:1520572..1520600
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Hg19::chr2:1520621..1520628,+p@chr2:1520621..1520628
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Hg19::chr2:158343898..158343909,-p@chr2:158343898..158343909
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Hg19::chr2:158343918..158343927,-p@chr2:158343918..158343927
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Hg19::chr2:158343934..158343940,-p@chr2:158343934..158343940
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Hg19::chr2:197340431..197340432,-p@chr2:197340431..197340432
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Hg19::chr2:197823357..197823368,-p@chr2:197823357..197823368
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Hg19::chr2:227513701..227513706,+p@chr2:227513701..227513706
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Hg19::chr2:34022913..34022919,+p@chr2:34022913..34022919
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Hg19::chr2:3714939..3714981,-p@chr2:3714939..3714981
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Hg19::chr2:52234734..52234740,+p@chr2:52234734..52234740
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Hg19::chr2:52812446..52812455,-p@chr2:52812446..52812455
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Hg19::chr2:53244329..53244334,-p@chr2:53244329..53244334
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Hg19::chr2:53318401..53318420,-p@chr2:53318401..53318420
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Hg19::chr2:62269106..62269114,-p@chr2:62269106..62269114
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Hg19::chr2:65728058..65728073,+p@chr2:65728058..65728073
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Hg19::chr2:70900377..70900392,+p@chr2:70900377..70900392
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Hg19::chr2:70900405..70900410,+p@chr2:70900405..70900410
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Hg19::chr2:85926535..85926541,-p@chr2:85926535..85926541
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Hg19::chr2:85926542..85926554,-p@chr2:85926542..85926554
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Hg19::chr2:89157785..89157798,-p1@X96754
Hg19::chr2:89165162..89165171,-p8@ENST00000430694
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Hg19::chr2:89165286..89165293,-p12@ENST00000430694
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Hg19::chr2:89165339..89165344,-p13@ENST00000430694
p13@uc002stj.1
Hg19::chr2:89165404..89165409,-p14@ENST00000430694
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Hg19::chr3:101698100..101698110,+p@chr3:101698100..101698110
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Hg19::chr3:101698119..101698127,+p@chr3:101698119..101698127
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Hg19::chr3:10392369..10392376,-p@chr3:10392369..10392376
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Hg19::chr3:10392377..10392387,-p@chr3:10392377..10392387
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Hg19::chr3:121796074..121796077,-p@chr3:121796074..121796077
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Hg19::chr3:13694356..13694401,-p@chr3:13694356..13694401
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Hg19::chr3:159786460..159786470,+p@chr3:159786460..159786470
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Hg19::chr3:161283841..161283854,+p@chr3:161283841..161283854
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Hg19::chr3:161294908..161294917,-p@chr3:161294908..161294917
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Hg19::chr3:161309546..161309550,-p@chr3:161309546..161309550
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Hg19::chr3:161318132..161318143,+p@chr3:161318132..161318143
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Hg19::chr3:161318150..161318179,+p@chr3:161318150..161318179
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Hg19::chr3:161392090..161392095,+p@chr3:161392090..161392095
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Hg19::chr3:161408998..161409000,+p@chr3:161408998..161409000
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Hg19::chr3:161460708..161460712,+p@chr3:161460708..161460712
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Hg19::chr3:161529625..161529628,+p@chr3:161529625..161529628
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Hg19::chr3:190993203..190993227,-p@chr3:190993203..190993227
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Hg19::chr3:191000491..191000512,-p6@UTS2D
Hg19::chr3:38675107..38675137,-p3@SCN5A
Hg19::chr3:39371176..39371183,+p4@CCR8
Hg19::chr3:39371191..39371212,+p2@CCR8
Hg19::chr3:39371255..39371266,+p3@CCR8
Hg19::chr3:4898478..4898486,-p1@ENST00000465436
Hg19::chr3:4927447..4927479,-p1@ENST00000449914
Hg19::chr3:49340163..49340172,-p@chr3:49340163..49340172
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Hg19::chr3:49340177..49340187,-p@chr3:49340177..49340187
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Hg19::chr3:49625039..49625044,-p@chr3:49625039..49625044
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Hg19::chr3:61556694..61556702,+p@chr3:61556694..61556702
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Hg19::chr3:61602894..61602920,+p@chr3:61602894..61602920
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Hg19::chr3:61602931..61602940,+p@chr3:61602931..61602940
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Hg19::chr3:61603162..61603195,+p@chr3:61603162..61603195
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Hg19::chr3:61623316..61623327,+p@chr3:61623316..61623327
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Hg19::chr3:61626942..61626951,+p@chr3:61626942..61626951
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Hg19::chr3:97687405..97687428,-p@chr3:97687405..97687428
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Hg19::chr3:97687455..97687458,-p@chr3:97687455..97687458
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Hg19::chr3:97690850..97690873,-p5@MINA
Hg19::chr3:97690939..97690946,-p8@MINA
Hg19::chr3:97690955..97690970,-p2@MINA
Hg19::chr4:1250163..1250171,+p@chr4:1250163..1250171
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Hg19::chr4:178148315..178148320,-p@chr4:178148315..178148320
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Hg19::chr4:18419509..18419512,-p@chr4:18419509..18419512
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Hg19::chr4:187680759..187680766,+p@chr4:187680759..187680766
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Hg19::chr4:2056075..2056082,-p@chr4:2056075..2056082
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Hg19::chr4:6174579..6174583,+p@chr4:6174579..6174583
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Hg19::chr4:6179706..6179711,-p@chr4:6179706..6179711
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Hg19::chr4:7123999..7124002,+p@chr4:7123999..7124002
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Hg19::chr4:7124009..7124013,+p@chr4:7124009..7124013
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Hg19::chr5:115270490..115270517,-p@chr5:115270490..115270517
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Hg19::chr5:115270539..115270548,-p@chr5:115270539..115270548
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Hg19::chr5:115337867..115337903,+p@chr5:115337867..115337903
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Hg19::chr5:115367942..115367951,+p@chr5:115367942..115367951
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Hg19::chr5:115367955..115367970,+p@chr5:115367955..115367970
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Hg19::chr5:115368012..115368021,+p@chr5:115368012..115368021
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Hg19::chr5:115368162..115368176,+p@chr5:115368162..115368176
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Hg19::chr5:115383312..115383337,+p@chr5:115383312..115383337
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Hg19::chr5:16901503..16901504,-p@chr5:16901503..16901504
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Hg19::chr5:16901509..16901524,-p@chr5:16901509..16901524
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Hg19::chr5:16901525..16901530,-p@chr5:16901525..16901530
-
Hg19::chr5:175612149..175612227,-p1@ENST00000510850
p1@ENST00000512260
p1@ENST00000515403
Hg19::chr5:24310806..24310812,+p@chr5:24310806..24310812
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Hg19::chr5:80924053..80924056,-p@chr5:80924053..80924056
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Hg19::chr6:109196310..109196342,+p@chr6:109196310..109196342
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Hg19::chr6:109205799..109205804,+p@chr6:109205799..109205804
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Hg19::chr6:109205829..109205846,+p@chr6:109205829..109205846
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Hg19::chr6:109205851..109205869,+p@chr6:109205851..109205869
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Hg19::chr6:115036814..115036827,+p@chr6:115036814..115036827
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Hg19::chr6:115036832..115036842,+p@chr6:115036832..115036842
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Hg19::chr6:13230218..13230229,+p@chr6:13230218..13230229
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Hg19::chr6:13230246..13230266,+p@chr6:13230246..13230266
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Hg19::chr6:15077465..15077475,-p@chr6:15077465..15077475
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Hg19::chr6:15135364..15135372,-p@chr6:15135364..15135372
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Hg19::chr6:15135428..15135449,-p@chr6:15135428..15135449
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Hg19::chr6:152961829..152961838,+p@chr6:152961829..152961838
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Hg19::chr6:152961866..152961879,+p@chr6:152961866..152961879
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Hg19::chr6:161347970..161347980,+p@chr6:161347970..161347980
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Hg19::chr6:161735947..161735970,-p@chr6:161735947..161735970
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Hg19::chr6:161736275..161736279,-p@chr6:161736275..161736279
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Hg19::chr6:33096318..33096350,+p@chr6:33096318..33096350
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Hg19::chr6:57372069..57372092,+p@chr6:57372069..57372092
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Hg19::chr6:57440646..57440650,+p@chr6:57440646..57440650
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Hg19::chr6:6606280..6606286,-p@chr6:6606280..6606286
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Hg19::chr6:66618141..66618173,-p@chr6:66618141..66618173
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Hg19::chr6:66637170..66637178,-p@chr6:66637170..66637178
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Hg19::chr6:66637209..66637223,-p@chr6:66637209..66637223
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Hg19::chr6:93434288..93434299,+p@chr6:93434288..93434299
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Hg19::chr7:104554636..104554658,+p@chr7:104554636..104554658
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Hg19::chr7:105440951..105440961,-p@chr7:105440951..105440961
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Hg19::chr7:105440971..105440979,-p@chr7:105440971..105440979
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Hg19::chr7:105441012..105441027,-p@chr7:105441012..105441027
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Hg19::chr7:105441033..105441046,-p@chr7:105441033..105441046
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Hg19::chr7:105441051..105441056,-p@chr7:105441051..105441056
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Hg19::chr7:105448057..105448077,+p@chr7:105448057..105448077
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Hg19::chr7:107431560..107431575,-p@chr7:107431560..107431575
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Hg19::chr7:107431592..107431600,-p@chr7:107431592..107431600
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Hg19::chr7:111646277..111646299,-p@chr7:111646277..111646299
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Hg19::chr7:135787945..135787950,+p@chr7:135787945..135787950
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Hg19::chr7:137030541..137030575,-p@chr7:137030541..137030575
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Hg19::chr7:138124213..138124244,+p@chr7:138124213..138124244
+
Hg19::chr7:142206567..142206570,-p4@uc011ksc.1
Hg19::chr7:142206670..142206682,-p1@uc011ksc.1
Hg19::chr7:142206739..142206746,-p2@uc011ksc.1
Hg19::chr7:142206976..142206984,-p1@uc003vyj.2
Hg19::chr7:142207004..142207033,-p1@TRBV10-2
Hg19::chr7:142207043..142207046,-p3@TRBV10-2
Hg19::chr7:148133781..148133792,-p@chr7:148133781..148133792
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Hg19::chr7:156898363..156898368,+p1@AK130204
Hg19::chr7:171678..171698,+p@chr7:171678..171698
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Hg19::chr7:27953048..27953089,-p@chr7:27953048..27953089
-
Hg19::chr7:4573373..4573383,+p@chr7:4573373..4573383
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Hg19::chr7:63459221..63459237,+p@chr7:63459221..63459237
+
Hg19::chr7:70060849..70060859,+p@chr7:70060849..70060859
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Hg19::chr7:70203417..70203427,+p@chr7:70203417..70203427
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Hg19::chr7:70250599..70250641,+p@chr7:70250599..70250641
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Hg19::chr7:70358448..70358468,-p@chr7:70358448..70358468
-
Hg19::chr7:71868415..71868431,-p13@CALN1
Hg19::chr7:71868448..71868454,-p33@CALN1
Hg19::chr7:91209299..91209339,-p@chr7:91209299..91209339
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Hg19::chr8:103075001..103075005,-p@chr8:103075001..103075005
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Hg19::chr8:116430595..116430636,-p@chr8:116430595..116430636
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Hg19::chr8:116430640..116430666,-p@chr8:116430640..116430666
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Hg19::chr8:116430671..116430681,-p@chr8:116430671..116430681
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Hg19::chr8:117449322..117449337,-p@chr8:117449322..117449337
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Hg19::chr8:120662908..120662932,-p@chr8:120662908..120662932
-
Hg19::chr8:126171283..126171303,+p@chr8:126171283..126171303
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Hg19::chr8:126954724..126954729,+p@chr8:126954724..126954729
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Hg19::chr8:126954801..126954817,+p@chr8:126954801..126954817
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Hg19::chr8:126954902..126954910,+p@chr8:126954902..126954910
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Hg19::chr8:126965896..126965903,+p@chr8:126965896..126965903
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Hg19::chr8:13490803..13490806,+p@chr8:13490803..13490806
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Hg19::chr8:142426120..142426125,+p@chr8:142426120..142426125
+
Hg19::chr8:142431453..142431493,+p@chr8:142431453..142431493
+
Hg19::chr8:17611643..17611691,-p13@MTUS1
Hg19::chr8:17611701..17611714,-p39@MTUS1
Hg19::chr8:71053850..71053871,-p22@NCOA2
Hg19::chr8:80659403..80659408,-p@chr8:80659403..80659408
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Hg19::chr9:135730308..135730344,-p@chr9:135730308..135730344
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Hg19::chr9:135730367..135730374,-p@chr9:135730367..135730374
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Hg19::chr9:135730378..135730387,-p@chr9:135730378..135730387
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Hg19::chr9:27485361..27485373,-p@chr9:27485361..27485373
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Hg19::chr9:72110362..72110371,-p@chr9:72110362..72110371
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Hg19::chr9:72110378..72110387,-p@chr9:72110378..72110387
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Hg19::chr9:72110397..72110405,-p@chr9:72110397..72110405
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Hg19::chr9:72110413..72110420,-p@chr9:72110413..72110420
-
Hg19::chr9:72110424..72110435,-p@chr9:72110424..72110435
-
Hg19::chr9:72110438..72110450,-p@chr9:72110438..72110450
-
Hg19::chr9:72110472..72110517,-p@chr9:72110472..72110517
-
Hg19::chrX:24315531..24315536,-p@chrX:24315531..24315536
-
Hg19::chrX:30250179..30250188,+p@chrX:30250179..30250188
+
Hg19::chrX:30250205..30250214,+p@chrX:30250205..30250214
+
Hg19::chrX:30265485..30265527,+p@chrX:30265485..30265527
+
Hg19::chrX:37322073..37322083,-p@chrX:37322073..37322083
-
Hg19::chrX:37343958..37343963,+p@chrX:37343958..37343963
+
Hg19::chrX:39714022..39714050,-p@chrX:39714022..39714050
-
Hg19::chrX:47967364..47967379,+p1@SSX6
Hg19::chrX:48114805..48114830,+p1@SSX1
Hg19::chrX:48138441..48138462,-p@chrX:48138441..48138462
-
Hg19::chrX:48166729..48166731,+p@chrX:48166729..48166731
+
Hg19::chrX:65423216..65423225,+p16@HEPH
Hg19::chrY:13470482..13470486,+p1@ENST00000557360
Hg19::chrY:22917989..22917999,+p2@RPS4Y2
Hg19::chrY:22918021..22918033,+p1@RPS4Y2
Hg19::chrY:22919344..22919347,+p@chrY:22919344..22919347
+
Hg19::chrY:6846049..6846056,+p@chrY:6846049..6846056
+
Hg19::chrY:6846089..6846096,+p@chrY:6846089..6846096
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br><br>disease_data<br>

Cell Type
Ontology termp-valuen
T cell2.15e-0925
pro-T cell2.15e-0925
Disease
Ontology termp-valuen
lymphoma3.81e-2110


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10
MA0004.10.880187
MA0006.10.000170414
MA0007.10.386191
MA0009.10.186178
MA0014.10
MA0017.10.076465
MA0019.10.100613
MA0024.10.139213
MA0025.10.427785
MA0027.10.922808
MA0028.10.000403301
MA0029.11.62356
MA0030.10.149666
MA0031.10.86383
MA0038.14.57201
MA0040.11.08001
MA0041.10.388355
MA0042.10.763761
MA0043.10.318612
MA0046.10.085725
MA0048.10.00312825
MA0050.11.07381
MA0051.10.456017
MA0052.10.0449585
MA0055.10.0550993
MA0056.10
MA0057.10.000493998
MA0058.10.303648
MA0059.10.232848
MA0060.137.574
MA0061.10.78749
MA0063.10
MA0066.10.365258
MA0067.10.137399
MA0068.10.0665135
MA0069.12.18956
MA0070.11.40205
MA0071.11.76748
MA0072.11.37373
MA0073.10
MA0074.10.120158
MA0076.10.0110233
MA0077.10.242994
MA0078.10.388693
MA0081.10.0188166
MA0083.12.38015
MA0084.10.306765
MA0087.10.399812
MA0088.10.0243159
MA0089.10
MA0090.10.0449587
MA0091.10.0845264
MA0092.10.174583
MA0093.11.37458
MA0095.10
MA0098.10
MA0100.10.315586
MA0101.11.13271
MA0103.10.500328
MA0105.10.031255
MA0106.10.095216
MA0107.11.38747
MA0108.21.90634
MA0109.10
MA0111.10.0249187
MA0113.10.369828
MA0114.10.0237874
MA0115.10.22328
MA0116.10.00394802
MA0117.10.0551061
MA0119.10.351496
MA0122.10.287721
MA0124.10.17773
MA0125.10.389215
MA0130.10
MA0131.10.00337215
MA0132.10
MA0133.10
MA0135.10.385515
MA0136.10.392662
MA0139.10.000503948
MA0140.12.49098
MA0141.10.758532
MA0142.10.0991304
MA0143.10.494339
MA0144.10.148412
MA0145.15.3219e-05
MA0146.15.78596e-16
MA0147.10.160404
MA0148.10.0846097
MA0149.10.0179384
MA0062.20.00241009
MA0035.22.47974
MA0039.20.00777168
MA0138.20.190787
MA0002.22.33314
MA0137.20.949671
MA0104.20.0462804
MA0047.20.272394
MA0112.21.92304e-06
MA0065.20.000317595
MA0150.10.121719
MA0151.10
MA0152.10.23831
MA0153.10.0306959
MA0154.10.000444065
MA0155.12.97299e-07
MA0156.10.291922
MA0157.12.28046
MA0158.10
MA0159.10.0079412
MA0160.11.27605
MA0161.10
MA0162.10
MA0163.14.91209e-12
MA0164.11.30091
MA0080.20.361789
MA0018.20.0971146
MA0099.21.59156
MA0079.20
MA0102.20.348288
MA0258.10.0171418
MA0259.10.0174535
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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