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NonredundantMotifs:145: Difference between revisions

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|representative_motif_id=Arid5a_secondary
|representative_motif_id=Arid5a_secondary
|representative_motif_name=SCI09
|representative_motif_name=SCI09
|score=0.0106892898609448690
|score=0.010689289860944869
|uniprot_entry_name=ARI5A_HUMAN
|uniprot_entry_name=ARI5A_HUMAN
}}
}}
[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]

Revision as of 13:34, 1 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known145
  • db :UNIPROBE
  • Id :Arid5a_secondary
  • name :SCI09
  • score :0.010689289860944869
  • External refs:
EntrezGene:10865
UniProt:10865

  • Internal refs:
EntrezGene:10865


Motif matrix
{{{PWM}}}

Sub Motif Members