NonredundantMotifs:41

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known41
• db :HOMER
• Id :RUNX1_Jurkat-RUNX1-ChIP-Seq
• name  :
• score :0.526554319571298
  
• External refs:

EntrezGene:861
UniProt:861

• Internal refs:

EntrezGene:861

Motif matrix
PO A C G T 1 926 257 50 381 2 1444 2 166 2 3 1404 47 161 2 4 2 1608 2 2 5 2 1608 2 2 6 1428 2 107 77 7 2 1608 2 2 8 1473 92 2 47 9 643 108 547 316 10 579 575 261 199