NonredundantMotifs:42

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known42
• db :UNIPROBE
• Id :Cutl1_3494.2
• name :CELL08
• score :0.049918069368157264
  
• External refs:

EntrezGene:1523
UniProt:1523

• Internal refs:

EntrezGene:1523

Motif matrix

P0 A C G T 1 0.233719878781548 0.0829031403115646 0.208991386273887 0.474385594633001 2 0.507651389943249 0.192839150319912 0.16565706977496 0.133852389961878 3 0.41685692164264 0.143747361001708 0.322291781490819 0.117103935864833 4 0.0293654411767698 0.184696894648939 0.0938567003019425 0.692080963872349 5 0.144572605818625 0.0537380728037711 0.658700752346673 0.142988569030931 6 0.867185627408322 0.0532209323358204 0.0329931815018921 0.0466002587539652 7 0.0428122143940767 0.0125982472327541 0.00626940577096154 0.938320132602208 8 0.338930030712191 0.0561801547352813 0.507869067382374 0.0970207471701534 9 0.938320132602208 0.00626940577096154 0.0125982472327541 0.0428122143940767 10 0.0466002587539652 0.0329931815018921 0.0532209323358204 0.867185627408322 11 0.142988569030931 0.658700752346673 0.0537380728037711 0.144572605818625 12 0.692080963872349 0.0938567003019425 0.184696894648939 0.0293654411767698 13 0.260491123697271 0.409201783908459 0.153408331673949 0.176898760720322 14 0.151407378097889 0.0655145127031483 0.123403953555388 0.659674155643575 15 0.492484444533162 0.127826187539521 0.190197894237489 0.189491473689828