NonredundantMotifs:143

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known143
• db :HOMER
• Id :EBNA1_Raji-EBNA1-ChIP-Seq(GSE30709)
• name  :
• score :0.03617418044016713
  
• External refs:

EntrezGene:-
UniProt:-

• Internal refs:

EntrezGene:-

Motif matrix
PO A C G T 1 1 1 584 1 2 138 1 447 1 3 128 229 2 228 4 584 1 1 1 5 6 1 579 1 6 4 365 85 133 7 405 102 65 15 8 106 166 63 252 9 221 72 140 154 10 22 73 76 416 11 144 115 323 5 12 1 572 1 13 13 1 1 1 584 14 224 1 213 149 15 1 445 1 140 16 1 584 1 1 17 106 326 19 136 18 168 116 136 167 19 144 131 198 114 20 146 153 157 131