NonredundantMotifs:146: Difference between revisions
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|entrez_gene_id=2551
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gabpa_secondary;SCI09
|name=known146
|representative_motif_db=UNIPROBE
|representat...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.233133339156189;0.551827616522044;0.139009183714433;0.076029860607334!2;0.100084746950863;0.525562098450111;0.10168796465267;0.272665189946356!3;0.252996031651427;0.198121241192533;0.299171373771941;0.249711353384099!4;0.141471209905834;0.19528955137146;0.234560085469902;0.428679153252804!5;0.16099277566735;0.44276490301237;0.0826527361491613;0.313589585171118!6;0.307889755304365;0.127949813107235;0.0717127398394238;0.492447691748975!7;0.0934528928492841;0.148935060504859;0.0802878475645367;0.677324199081321!8;0.0835351224674759;0.634211812396974;0.0746523976115838;0.207600667523966!9;0.098119166747495;0.639327706020271;0.0999574346154852;0.162595692616749!10;0.0674303361733764;0.451775703257592;0.357187662190642;0.12360629837839!11;0.28625899695387;0.466974929291126;0.0630134041495288;0.183752669605476!12;0.203211228937249;0.42263706533952;0.133368239796288;0.240783465926943!13;0.111205617031294;0.315595311444844;0.192833330259886;0.380365741263976!14;0.19946187518116;0.324651628692659;0.305491243779281;0.170395252346901!15;0.347919196799417;0.292386663001252;0.23072410786487;0.128970032334461!16;0.254647938579976;0.29419572375395;0.194942352887174;0.256213984778901 | |||
|entrez_gene_id=2551 | |entrez_gene_id=2551 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Gabpa_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Gabpa_secondary;SCI09 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known146
- db :UNIPROBE
- Id :Gabpa_secondary
- name :SCI09
- score :2.566099954572482
- External refs:
- Internal refs:
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Sub Motif Members
