NonredundantMotifs:147: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=59348
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN350_f1
|name=known147
|representative_motif_db=HOCOMOCO
|representative_motif_id...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;8.27127659574468;1.67553191489361;3.377659574468085;1.67553191489361!2;2.87234042553192;7.3404255319149;4.787234042553195;0.0!3;1.702127659574475;0.0;13.29787234042554;0.0!4;0.9574468085106376;0.0;13.29787234042554;0.7446808510638301!5;0.9574468085106376;0.0;12.12765957446808;1.9148936170212751!6;4.68085106382978;3.8297872340425503;5.531914893617025;0.9574468085106376!7;3.8297872340425503;5.638297872340425;5.531914893617025;0.0!8;2.87234042553192;0.0;9.468085106382976;2.659574468085105!9;2.87234042553192;10.42553191489362;0.9574468085106376;0.7446808510638301!10;12.340425531914894;1.702127659574475;0.0;0.9574468085106376!11;5.531914893617025;0.0;9.468085106382976;0.0!12;3.8297872340425503;0.9574468085106376;6.382978723404255;3.8297872340425503!13;2.659574468085105;2.87234042553192;4.787234042553195;4.68085106382978!14;5.7446808510638245;3.61702127659575;4.68085106382978;0.9574468085106376!15;0.9574468085106376;0.9574468085106376;3.8297872340425503;9.255319148936175!16;0.0;4.787234042553195;0.0;10.212765957446805!17;0.0;0.9574468085106376;0.0;14.04255319148937!18;0.0;0.0;10.319148936170219;4.68085106382978!19;0.0;1.702127659574475;4.68085106382978;8.617021276595745!20;0.7446808510638301;1.9148936170212751;5.7446808510638245;6.59574468085107!21;0.7446808510638301;1.9148936170212751;8.510638297872344;3.8297872340425503!22;0.9574468085106376;9.468085106382976;3.8297872340425503;0.7446808510638301!23;0.0;13.29787234042554;0.7446808510638301;0.9574468085106376!24;1.861702127659575;7.606382978723399;3.67021276595745;1.861702127659575 | |||
|entrez_gene_id=59348 | |entrez_gene_id=59348 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN350_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN350_f1 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known147
- db :HOCOMOCO
- Id :ZN350_f1
- name :
- score :2.6791124838503686
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
