NonredundantMotifs:203: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=1820
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ARI3A_do
|name=known203
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;17.2470094123503;4.252136134035501;14.385430897850675;8.265807391862715!2;30.102534433704008;4.0136712578272;0.0;10.034178144567989!3;4.967530762660428;0.0;0.0;39.18285307343877!4;6.974366391574009;0.0;0.0;37.17601744452519!5;42.14354820718558;2.006835628913598;0.0;0.0!6;41.1896887023524;2.960695133746813;0.0;0.0!7;21.022215793969202;0.0;1.0529761240803868;22.0751919180496!8;0.0;18.061520660222396;10.034178144567989;16.054685031308814!9;12.994873278314792;8.027342515654407;19.114496784302798;4.0136712578272!10;22.0751919180496;2.006835628913598;16.054685031308814;4.0136712578272!11;20.068356289135977;2.006835628913598;6.974366391574009;15.100825526475592!12;32.20848668186476;0.0;4.0136712578272;7.928225896407232!13;6.020506886740784;2.006835628913598;4.0136712578272;32.109370062617586!14;7.073483010821184;25.13500367104358;2.006835628913598;9.935061525320812!15;32.109370062617586;0.0;0.0;12.041013773481613!16;33.16234618669799;2.006835628913598;0.0;8.981202020487633!17;42.14354820718558;0.0;0.0;2.006835628913598!18;18.061520660222396;0.0;2.006835628913598;24.08202754696318!19;5.066647381907604;6.020506886740784;4.0136712578272;29.049558309623606!20;23.029051422882826;6.020506886740784;1.0529761240803868;14.047849402395194!21;27.04272268071003;3.0598117529939888;0.0;14.047849402395194!22;29.38713980507909;0.23846487620830295;3.2982766292022903;11.226502525609519 | |||
|entrez_gene_id=1820 | |entrez_gene_id=1820 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ARI3A_do | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ARI3A_do | ||
Revision as of 10:49, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known203
- db :HOCOMOCO
- Id :ARI3A_do
- name :
- score :0.07433426291478966
- External refs:
- Internal refs:
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Sub Motif Members
