NonredundantMotifs:206

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known206
• db :HOMER
• Id :PAX3_Rh4-PAX3
• name :FKHR-ChIP-Seq
• score :0.04023604019301075
  
• External refs:

EntrezGene:5077
UniProt:5077

• Internal refs:

EntrezGene:5077

Motif matrix
PO A C G T 1 593 52 147 215 2 3 599 404 1 3 1 751 1 254 4 475 6 509 17 5 18 1 76 912 6 195 3 794 15 7 788 15 103 101 8 88 917 1 1 9 224 102 25 656 10 965 2 39 1 11 1004 1 1 1 12 92 22 18 875 13 60 214 196 537 14 275 200 293 239 15 324 218 272 193