NonredundantMotifs:62: Difference between revisions
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|motif_cluster_2013_march_motif_members= /SWISSREGULON:MTF1.p2 /HOCOMOCO:MTF1_f1 /UNIPROBE:Gm397_primary;SCI09~Zscan4_primary;SCI09~Mtf1_pr...") |
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{{Known_motif | {{Known_motif | ||
|entrez_gene_id= | |PWM=P0;A;C;G;T!1;15.421548117154835;12.053347280334753;3.873430962343097;3.6809623430962524!2;4.715481171548134;2.309623430962344;28.004184100418456;0.0!3;3.271966527196655;0.9623430962343115;13.28033472803348;17.51464435146445!4;7.506276150627611;5.966527196652714;20.882845188284534;0.6736401673640163!5;7.602510460251052;18.958158995815907;1.5397489539748983;6.9288702928870425!6;2.9832635983263636;29.640167364016758;0.8661087866108785;1.5397489539748983!7;0.0;0.0;35.0292887029289;0.0!8;3.368200836820088;0.8661087866108785;4.523012552301255;26.271966527196675!9;0.0;0.9623430962343115;34.06694560669461;0.0!10;0.0;11.451882845188297;0.0;23.577405857740604!11;0.0;0.0;35.0292887029289;0.0!12;0.0;34.16317991631805;0.0;0.8661087866108785!13;35.0292887029289;0.0;0.0;0.0!14;18.669456066945624;4.33054393305441;6.255230125523033;5.774058577405869!15;22.133891213389145;9.527196652719676;1.8284518828451901;1.5397489539748983!16;14.338912133891215;3.656903765690366;10.297071129707124;6.736401673640163!17;4.186192468619268;15.25313807531384;10.92259414225943;4.667364016736397 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:MTF1.p2 | |entrez_gene_id=4520 | ||
|name= | |motif_cluster_2013_march_motif_members= /HOCOMOCO:MTF1_f1 /SWISSREGULON:MTF1.p2 /UNIPROBE:Mtf1_primary;SCI09~Zscan4_primary;SCI09~Gm397_primary;SCI09 | ||
|representative_motif_db= | |name=non-redundant62 | ||
|representative_motif_id= | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=MTF1_f1 | |||
|representative_motif_name= | |representative_motif_name= | ||
|score= | |score=0.7983217808413842 | ||
|uniprot_entry_name= | |uniprot_entry_name=MTF1_HUMAN | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant62
- db :HOCOMOCO
- Id :MTF1_f1
- name :
- score :0.7983217808413842
- External refs:
- Internal refs:
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Sub Motif Members
