NonredundantMotifs:65

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant65
• db :HOCOMOCO
• Id :ATF6A_si
• name  :
• score :0.19333391617419116
  
• External refs:

EntrezGene:22926
UniProt:22926

• Internal refs:

EntrezGene:22926

Motif matrix

P0 A C G T 1 3.6923076923076996 3.6923076923076996 11.6923076923077 0.923076923076922 2 0.0 4.3076923076923 6.46153846153846 9.23076923076924 3 0.0 5.23076923076924 12.0 2.76923076923076 4 1.846153846153846 8.0 9.23076923076924 0.923076923076922 5 0.0 0.615384615384616 0.0 19.38461538461538 6 0.0 0.923076923076922 19.07692307692308 0.0 7 18.46153846153846 0.923076923076922 0.0 0.615384615384616 8 0.0 20.0 0.0 0.0 9 0.0 0.0 20.0 0.0 10 0.0 0.0 0.0 20.0 11 0.0 1.846153846153846 18.15384615384616 0.0 12 1.846153846153846 0.0 18.15384615384616 0.0