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|PWM=P0;A;C;G;T!1;0.201522193067703;0.336845014678194;0.183740389587064;0.277892402667039!2;0.238704949381827;0.35437843439097;0.165331732062492;0.241584884164711!3;0.350857902047959;0.0314270482030479;0.308481895132862;0.309233154616131!4;0.104423303025766;0.870793514253159;0.0186764661055601;0.00610671661551557!5;0.313245810675351;0.259943593467258;0.277569590891493;0.149241004965898!6;0.00358994195605107;0.973376972945308;0.00252023339521949;0.0205128517034213!7;0.899716096525759;0.0254890794055258;0.015458406194432;0.0593364178742831!8;0.0492243632422561;0.00641470200109169;0.938214277871109;0.00614665688554373!9;0.00202097339489514;0.859631077747346;0.00790298516972887;0.13044496368803!10;0.772817512592719;0.0026585703816194;0.187333717958274;0.0371901990673872!11;0.00845556231047015;0.0151703398091589;0.594694642110373;0.381679455769998!12;0.00411820078878555;0.00918765295047911;0.961505843145346;0.0251883031153892!13;0.36715124244538;0.230955146363652;0.204474960432173;0.197418650758795!14;0.267507905548199;0.19366028579818;0.430069505507387;0.108762303146235!15;0.444448914150772;0.0991274677797265;0.212182302957055;0.244241315112447
|PWM=P0;A;C;G;T!1;0.201522193067703;0.336845014678194;0.183740389587064;0.277892402667039!2;0.238704949381827;0.35437843439097;0.165331732062492;0.241584884164711!3;0.350857902047959;0.0314270482030479;0.308481895132862;0.309233154616131!4;0.104423303025766;0.870793514253159;0.0186764661055601;0.00610671661551557!5;0.313245810675351;0.259943593467258;0.277569590891493;0.149241004965898!6;0.00358994195605107;0.973376972945308;0.00252023339521949;0.0205128517034213!7;0.899716096525759;0.0254890794055258;0.015458406194432;0.0593364178742831!8;0.0492243632422561;0.00641470200109169;0.938214277871109;0.00614665688554373!9;0.00202097339489514;0.859631077747346;0.00790298516972887;0.13044496368803!10;0.772817512592719;0.0026585703816194;0.187333717958274;0.0371901990673872!11;0.00845556231047015;0.0151703398091589;0.594694642110373;0.381679455769998!12;0.00411820078878555;0.00918765295047911;0.961505843145346;0.0251883031153892!13;0.36715124244538;0.230955146363652;0.204474960432173;0.197418650758795!14;0.267507905548199;0.19366028579818;0.430069505507387;0.108762303146235!15;0.444448914150772;0.0991274677797265;0.212182302957055;0.244241315112447
|entrez_gene_id=7546
|entrez_gene_id=7546
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zic2_secondary;SCI09~Zic3_secondary;SCI09~Zic1_secondary;SCI09
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zic2_secondary;SCI09~Zic1_secondary;SCI09~Zic3_secondary;SCI09
|name=known82
|name=non-redundant82
|representative_motif_db=UNIPROBE
|representative_motif_db=UNIPROBE
|representative_motif_id=Zic2_secondary
|representative_motif_id=Zic2_secondary
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[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]
[[Category:NonRedundantMotifCluster]]

Latest revision as of 10:21, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant82
  • db :UNIPROBE
  • Id :Zic2_secondary
  • name :SCI09
  • score :0.28385848000944897
  • External refs:
EntrezGene:7546
UniProt:7546

  • Internal refs:
EntrezGene:7546


Motif matrix
P0ACGT
10.2015221930677030.3368450146781940.1837403895870640.277892402667039
20.2387049493818270.354378434390970.1653317320624920.241584884164711
30.3508579020479590.03142704820304790.3084818951328620.309233154616131
40.1044233030257660.8707935142531590.01867646610556010.00610671661551557
50.3132458106753510.2599435934672580.2775695908914930.149241004965898
60.003589941956051070.9733769729453080.002520233395219490.0205128517034213
70.8997160965257590.02548907940552580.0154584061944320.0593364178742831
80.04922436324225610.006414702001091690.9382142778711090.00614665688554373
90.002020973394895140.8596310777473460.007902985169728870.13044496368803
100.7728175125927190.00265857038161940.1873337179582740.0371901990673872
110.008455562310470150.01517033980915890.5946946421103730.381679455769998
120.004118200788785550.009187652950479110.9615058431453460.0251883031153892
130.367151242445380.2309551463636520.2044749604321730.197418650758795
140.2675079055481990.193660285798180.4300695055073870.108762303146235
150.4444489141507720.09912746777972650.2121823029570550.244241315112447

Sub Motif Members

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