NonredundantMotifs:166: Difference between revisions
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|entrez_gene_id=7004
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TEAD4_f1
|name=known166
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;8.017341040462396;0.0;1.0982658959537526;1.9768786127167521!2;1.0982658959537526;0.0;9.005780346820773;0.9884393063583773!3;5.052023121387257;0.9884393063583773;5.052023121387268;0.0!4;1.0982658959537526;0.0;9.005780346820773;0.9884393063583773!5;4.173410404624257;5.930635838150268;0.0;0.9884393063583773!6;0.0;0.0;0.0;11.0924855491329!7;7.0289017341040205;0.0;4.06358381502888;0.0!8;0.0;0.0;2.965317919075128;8.127167630057773!9;0.0;0.0;0.0;11.0924855491329!10;2.965317919075128;0.0;1.0982658959537526;7.0289017341040205!11;0.0;1.0982658959537526;0.0;9.99421965317915!12;0.0;0.0;0.0;11.0924855491329 | |||
|entrez_gene_id=7004 | |entrez_gene_id=7004 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TEAD4_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:TEAD4_f1 | ||
|name= | |name=non-redundant166 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=TEAD4_f1 | |representative_motif_id=TEAD4_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant166
- db :HOCOMOCO
- Id :TEAD4_f1
- name :
- score :0.05723784832245734
- External refs:
- Internal refs:
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Sub Motif Members
