NonredundantMotifs:206: Difference between revisions
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|entrez_gene_id=5077
|motif_cluster_2013_march_motif_members= /HOMER:PAX3_Rh4-PAX3;FKHR-ChIP-Seq
|name=known206
|representative_motif_db=HOMER
|representat...") |
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{{Known_motif | {{Known_motif | ||
|PWM=PO;A;C;G;T!1;593;52;147;215!2;3;599;404;1!3;1;751;1;254!4;475;6;509;17!5;18;1;76;912!6;195;3;794;15!7;788;15;103;101!8;88;917;1;1!9;224;102;25;656!10;965;2;39;1!11;1004;1;1;1!12;92;22;18;875!13;60;214;196;537!14;275;200;293;239!15;324;218;272;193 | |||
|entrez_gene_id=5077 | |entrez_gene_id=5077 | ||
|motif_cluster_2013_march_motif_members= /HOMER:PAX3_Rh4-PAX3;FKHR-ChIP-Seq | |motif_cluster_2013_march_motif_members= /HOMER:PAX3_Rh4-PAX3;FKHR-ChIP-Seq | ||
|name= | |name=non-redundant206 | ||
|representative_motif_db=HOMER | |representative_motif_db=HOMER | ||
|representative_motif_id=PAX3_Rh4-PAX3 | |representative_motif_id=PAX3_Rh4-PAX3 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant206
- db :HOMER
- Id :PAX3_Rh4-PAX3
- name :FKHR-ChIP-Seq
- score :0.04023604019301075
- External refs:
- Internal refs:
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Sub Motif Members
