NonredundantMotifs:208: Difference between revisions
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{{Known_motif | {{Known_motif|PWM=P0;A;C;G;T!1;0.19087109961234;0.208589846553343;0.418110986529497;0.18242806730482!2;0.317846045706655;0.1116689961018;0.286305586762104;0.28417937142944!3;0.648957608714369;0.110707324053762;0.203307027434418;0.0370280397974514!4;0.0369311359958521;0.0518841012886246;0.0465111890757494;0.864673573639774!5;0.0838314198147913;0.0471403292420458;0.807373504828836;0.0616547461143271!6;0.825537283101291;0.0408135271679518;0.0655016971062335;0.0681474926245234!7;0.0362293346977887;0.860338884743481;0.0490318085280631;0.0543999720306671!8;0.158666998571068;0.0265821365219747;0.782381517597413;0.0323693473095441!9;0.564583962329619;0.233980620660121;0.0837897822408393;0.117645634769421!10;0.39892861041386;0.0208412657798149;0.349286051369993;0.230944072436332!11;0.0183567215919035;0.259285763790638;0.208353400471036;0.514004114146423!12;0.691639877818751;0.0687107994766941;0.0993936421148;0.140255680589755!13;0.455948201263195;0.106302466030573;0.180731922712279;0.257017409993953!14;0.257718776679461;0.300244015064166;0.204520349061019;0.237516859195354|entrez_gene_id=466|motif_cluster_2013_march_motif_members= /UNIPROBE:Atf1_secondary;SCI09|name=non-redundant208|representative_motif_db=UNIPROBE|representative_motif_id=Atf1_secondary|representative_motif_name=SCI09|score=0.0583472460647591|uniprot_entry_name=ATF1_HUMAN}}[[Category:Motif]][[Category:MotifCluster2013March]][[Category:NonRedundantMotifCluster]] | ||
|PWM=P0;A;C;G;T!1;0.19087109961234;0.208589846553343;0.418110986529497;0.18242806730482!2;0.317846045706655;0.1116689961018;0.286305586762104;0.28417937142944!3;0.648957608714369;0.110707324053762;0.203307027434418;0.0370280397974514!4;0.0369311359958521;0.0518841012886246;0.0465111890757494;0.864673573639774!5;0.0838314198147913;0.0471403292420458;0.807373504828836;0.0616547461143271!6;0.825537283101291;0.0408135271679518;0.0655016971062335;0.0681474926245234!7;0.0362293346977887;0.860338884743481;0.0490318085280631;0.0543999720306671!8;0.158666998571068;0.0265821365219747;0.782381517597413;0.0323693473095441!9;0.564583962329619;0.233980620660121;0.0837897822408393;0.117645634769421!10;0.39892861041386;0.0208412657798149;0.349286051369993;0.230944072436332!11;0.0183567215919035;0.259285763790638;0.208353400471036;0.514004114146423!12;0.691639877818751;0.0687107994766941;0.0993936421148;0.140255680589755!13;0.455948201263195;0.106302466030573;0.180731922712279;0.257017409993953!14;0.257718776679461;0.300244015064166;0.204520349061019;0.237516859195354 | |||
|entrez_gene_id=466 | |||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Atf1_secondary;SCI09 | |||
|name=non-redundant208 | |||
|representative_motif_db=UNIPROBE | |||
|representative_motif_id=Atf1_secondary | |||
|representative_motif_name=SCI09 | |||
|score=0.0583472460647591 | |||
|uniprot_entry_name=ATF1_HUMAN | |||
}} | |||
[[Category:Motif]] | |||
[[Category:MotifCluster2013March]] | |||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 13:57, 31 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant208
- db :UNIPROBE
- Id :Atf1_secondary
- name :SCI09
- score :0.0583472460647591
- External refs:
- Internal refs:
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Sub Motif Members
