FFCP PHASE1:Hg19::chr17:37382189..37382225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=342667 | |EntrezGene=342667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23990 | |HGNC=23990 | ||
|TSSclassifier=S | |||
|UniProt=Q6ZMT1,D0IN09 | |UniProt=Q6ZMT1,D0IN09 | ||
|association_with_transcript=-149bp_to_ENST00000333461,NM_198993_5end | |association_with_transcript=-149bp_to_ENST00000333461,NM_198993_5end | ||
Revision as of 10:40, 8 July 2013
| Short description: | p1@STAC2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_STAC2_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -149bp_to_ENST00000333461, NM_198993_5end |
| EntrezGene: | STAC2 |
| HGNC: | 23990 |
| UniProt: | Q6ZMT1D0IN09 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@STAC2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.66e-65 | 56 |
| neural rod | 3.66e-65 | 56 |
| future spinal cord | 3.66e-65 | 56 |
| neural keel | 3.66e-65 | 56 |
| regional part of nervous system | 1.42e-62 | 53 |
| regional part of brain | 1.42e-62 | 53 |
| nervous system | 1.51e-61 | 89 |
| central nervous system | 2.68e-61 | 81 |
| brain | 4.22e-54 | 68 |
| future brain | 4.22e-54 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
