FFCP PHASE1:Hg19::chr10:102133437..102133463,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=28060|TSSclassifier=S|UniProt=|association_with_transcript=65bp_to_ENST00000454935_5end|description=CAGE_peak_5_at_LINC00263_5end|id=chr10:102133437..102133463,+|ontology_enrichment_celltype=CL:0000066!9.25e-18!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,7.79e-18,253|ontology_enrichment_development_v019=UBERON:0008947;5.85e-12;29|ontology_enrichment_disease=DOID:305!2.69e-22!106;DOID:0050687!4.89e-17!143;DOID:162!4.93e-08!235;DOID:14566!6.01e-08!239|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14!DOID:299;6.48e-10;25!DOID:305;9.96e-07;106|ontology_enrichment_disease_v019_2=DOID:305,1.79e-25,106;DOID:0050687,1.47e-18,143;DOID:1749,8.72e-11,14;DOID:299,1.05e-09,25;DOID:162,3.49e-09,235;DOID:14566,8.89e-09,239|ontology_enrichment_uberon=UBERON:0000033!2.53e-15!123;UBERON:0004121!7.98e-15!169;UBERON:0000064!2.12e-14!219;UBERON:0000153!3.37e-14!129;UBERON:0007811!3.37e-14!129;UBERON:0000924!1.13e-13!173;UBERON:0006601!1.13e-13!173;UBERON:0000475!1.42e-12!365;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0000063!3.88e-12!97;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000062!3.27e-11!511;UBERON:0000481!3.65e-11!347;UBERON:0000077!5.39e-11!130;UBERON:0008947!6.72e-10!38;UBERON:0003258!6.72e-10!38;UBERON:0001004!7.20e-10!72;UBERON:0003075!3.45e-09!86;UBERON:0007284!3.45e-09!86;UBERON:0001444!1.67e-08!48;UBERON:0004921!4.95e-08!129;UBERON:0004185!4.95e-08!129;UBERON:0002346!5.47e-08!90;UBERON:0003056!5.80e-08!61;UBERON:0001041!1.42e-07!98;UBERON:0001737!1.70e-07!9;UBERON:0000072!2.23e-07!46;UBERON:0000073!2.24e-07!94;UBERON:0001016!2.24e-07!94;UBERON:0000065!2.56e-07!53;UBERON:0005743!6.96e-07!86|ontology_enrichment_uberon_v019=UBERON:0001737;2.73e-13;9!UBERON:0001557;2.73e-13;9!UBERON:0000072;1.12e-10;37!UBERON:0002104;6.83e-08;21!UBERON:0007625;1.72e-07;11!UBERON:0000065;4.72e-07;44!UBERON:0000019;6.32e-07;19!UBERON:0000047;6.32e-07;19!UBERON:0004088;6.32e-07;19!UBERON:0010230;6.32e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.60e-13,9;UBERON:0008947,4.18e-11,38;UBERON:0003258,4.18e-11,38;UBERON:0000019,2.57e-08,20;UBERON:0000047,2.57e-08,20;UBERON:0010312,2.57e-08,20;UBERON:0004088,2.57e-08,20;UBERON:0010230,2.57e-08,20;UBERON:0003072,2.57e-08,20;UBERON:0004128,2.57e-08,20;UBERON:0003071,2.57e-08,20;UBERON:0000072,2.69e-08,47;UBERON:0000970,7.71e-08,21;UBERON:0002104,7.71e-08,21;UBERON:0007625,1.87e-07,11;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0001456,2.09e-07,22;UBERON:0001048,2.70e-07,160;UBERON:0001041,4.50e-07,87;UBERON:0003343,8.47e-07,4;UBERON:0004785,8.47e-07,4;UBERON:0000065,8.76e-07,54;UBERON:0004119,9.49e-07,160;UBERON:0000925,9.49e-07,160;UBERON:0006595,9.49e-07,160;UBERON:0001781,9.50e-07,4|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,2.62129646556207,0.791300934685361,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0.572471974262113,0.821246550437305,1.63205431473244,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,1.79616152611729,0.886917589850256,0.966182642624386,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,1.93944880838928,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0.573609190778008,0.121973706129595,0,0.580969714347592,0.207322110030741,0,0,0,0,0,0,0,2.72105640091641,2.19160097101532,1.20505514941741,2.09558548191549,1.08939722046203,0.949082476444386,2.29213223872279,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0.860919069801795,1.02940686179115,0.548751427043128,1.1240175325762,0.301586917234893,0,0.651616610620649,1.03993478527958,0,1.27523445472584,0.234817388471643,0,0,0,0.790204397959275,1.71697232418975,0,0,0,1.87467667973554,0.839910640994298,0.141775097242386,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0,0,0.507983154337352,2.6739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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28060 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=65bp_to_ENST00000454935_5end | |||
|description=CAGE_peak_5_at_LINC00263_5end | |||
|id=chr10:102133437..102133463,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.25e-18!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.79e-18,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.85e-12;29 | |||
|ontology_enrichment_disease=DOID:305!2.69e-22!106;DOID:0050687!4.89e-17!143;DOID:162!4.93e-08!235;DOID:14566!6.01e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14!DOID:299;6.48e-10;25!DOID:305;9.96e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.79e-25,106;DOID:0050687,1.47e-18,143;DOID:1749,8.72e-11,14;DOID:299,1.05e-09,25;DOID:162,3.49e-09,235;DOID:14566,8.89e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000033!2.53e-15!123;UBERON:0004121!7.98e-15!169;UBERON:0000064!2.12e-14!219;UBERON:0000153!3.37e-14!129;UBERON:0007811!3.37e-14!129;UBERON:0000924!1.13e-13!173;UBERON:0006601!1.13e-13!173;UBERON:0000475!1.42e-12!365;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0000063!3.88e-12!97;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000062!3.27e-11!511;UBERON:0000481!3.65e-11!347;UBERON:0000077!5.39e-11!130;UBERON:0008947!6.72e-10!38;UBERON:0003258!6.72e-10!38;UBERON:0001004!7.20e-10!72;UBERON:0003075!3.45e-09!86;UBERON:0007284!3.45e-09!86;UBERON:0001444!1.67e-08!48;UBERON:0004921!4.95e-08!129;UBERON:0004185!4.95e-08!129;UBERON:0002346!5.47e-08!90;UBERON:0003056!5.80e-08!61;UBERON:0001041!1.42e-07!98;UBERON:0001737!1.70e-07!9;UBERON:0000072!2.23e-07!46;UBERON:0000073!2.24e-07!94;UBERON:0001016!2.24e-07!94;UBERON:0000065!2.56e-07!53;UBERON:0005743!6.96e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.73e-13;9!UBERON:0001557;2.73e-13;9!UBERON:0000072;1.12e-10;37!UBERON:0002104;6.83e-08;21!UBERON:0007625;1.72e-07;11!UBERON:0000065;4.72e-07;44!UBERON:0000019;6.32e-07;19!UBERON:0000047;6.32e-07;19!UBERON:0004088;6.32e-07;19!UBERON:0010230;6.32e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.60e-13,9;UBERON:0008947,4.18e-11,38;UBERON:0003258,4.18e-11,38;UBERON:0000019,2.57e-08,20;UBERON:0000047,2.57e-08,20;UBERON:0010312,2.57e-08,20;UBERON:0004088,2.57e-08,20;UBERON:0010230,2.57e-08,20;UBERON:0003072,2.57e-08,20;UBERON:0004128,2.57e-08,20;UBERON:0003071,2.57e-08,20;UBERON:0000072,2.69e-08,47;UBERON:0000970,7.71e-08,21;UBERON:0002104,7.71e-08,21;UBERON:0007625,1.87e-07,11;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0001456,2.09e-07,22;UBERON:0001048,2.70e-07,160;UBERON:0001041,4.50e-07,87;UBERON:0003343,8.47e-07,4;UBERON:0004785,8.47e-07,4;UBERON:0000065,8.76e-07,54;UBERON:0004119,9.49e-07,160;UBERON:0000925,9.49e-07,160;UBERON:0006595,9.49e-07,160;UBERON:0001781,9.50e-07,4 | |||
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| |||
|short_description=p5@LINC00263 | |||
}} |
Revision as of 11:18, 10 September 2013
Short description: | p5@LINC00263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LINC00263_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000454935_5end |
EntrezGene: | NA |
HGNC: | 28060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.79e-18 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.60e-13 | 9 |
respiratory primordium | 4.18e-11 | 38 |
endoderm of foregut | 4.18e-11 | 38 |
camera-type eye | 2.57e-08 | 20 |
simple eye | 2.57e-08 | 20 |
immature eye | 2.57e-08 | 20 |
ocular region | 2.57e-08 | 20 |
eyeball of camera-type eye | 2.57e-08 | 20 |
optic cup | 2.57e-08 | 20 |
optic vesicle | 2.57e-08 | 20 |
eye primordium | 2.57e-08 | 20 |
segment of respiratory tract | 2.69e-08 | 47 |
eye | 7.71e-08 | 21 |
visual system | 7.71e-08 | 21 |
pigment epithelium of eye | 1.87e-07 | 11 |
digestive system | 1.95e-07 | 145 |
digestive tract | 1.95e-07 | 145 |
primitive gut | 1.95e-07 | 145 |
face | 2.09e-07 | 22 |
primordium | 2.70e-07 | 160 |
foregut | 4.50e-07 | 87 |
mucosa of oral region | 8.47e-07 | 4 |
respiratory system mucosa | 8.47e-07 | 4 |
respiratory tract | 8.76e-07 | 54 |
endoderm-derived structure | 9.49e-07 | 160 |
endoderm | 9.49e-07 | 160 |
presumptive endoderm | 9.49e-07 | 160 |
layer of retina | 9.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.79e-25 | 106 |
cell type cancer | 1.47e-18 | 143 |
squamous cell carcinoma | 8.72e-11 | 14 |
adenocarcinoma | 1.05e-09 | 25 |
cancer | 3.49e-09 | 235 |
disease of cellular proliferation | 8.89e-09 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.