FFCP PHASE1:Hg19::chr10:124907645..124907660,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3167|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5018|TSSclassifier=S|UniProt=A2RU54|association_with_transcript=7bp_to_ENST00000339992,NM_005519,uc001lhc.1_5end|coexpression_cluster_id=C488|description=CAGE_peak_1_at_HMX2_5end|id=chr10:124907645..124907660,+|ontology_enrichment_celltype=CL:0002535!1.54e-08!2;CL:0002322!1.64e-07!5|ontology_enrichment_celltype_v019=CL:0002535;3.70e-11;2|ontology_enrichment_celltype_v019_2=CL:0002535,3.70e-11,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4362!1.37e-07!5;DOID:162!2.60e-07!235;DOID:0050686!3.34e-07!137;DOID:14566!5.04e-07!239;DOID:8692!7.63e-07!31|ontology_enrichment_disease_v019=DOID:630;3.45e-21;1!DOID:0050177;3.45e-21;1!DOID:0050427;3.45e-21;1!DOID:3347;6.31e-21;1!DOID:4362;8.14e-17;5!DOID:8692;1.31e-10;31|ontology_enrichment_disease_v019_2=DOID:630,3.45e-21,1;DOID:0050177,3.45e-21,1;DOID:0050427,3.45e-21,1;DOID:3347,5.16e-21,1;DOID:4362,8.14e-17,5;DOID:8692,1.07e-10,31;DOID:1240,1.43e-08,39;DOID:0050686,8.37e-07,137|ontology_enrichment_uberon=UBERON:0006955!1.54e-08!2;UBERON:0004801!1.54e-08!2;UBERON:0000013!2.97e-07!5;UBERON:0002410!2.97e-07!5|ontology_enrichment_uberon_v019=UBERON:0000002;3.48e-14;6!UBERON:0001560;3.48e-14;6!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.48e-14,6;UBERON:0001560,3.48e-14,6;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.464775771478074,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4605608427326,22.1979677910152,0,0,1.22896305723383,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,25.5786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.643012593860077,0.962776056180637,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0.127894371303652,1.61737217095023,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14666819616632,0,0,0,0,0.754814217833368,0,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8468219076388|short_description=p1@HMX2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5018 | |||
|TSSclassifier=S | |||
|UniProt=A2RU54 | |||
|association_with_transcript=7bp_to_ENST00000339992,NM_005519,uc001lhc.1_5end | |||
|coexpression_cluster_id=C488 | |||
|description=CAGE_peak_1_at_HMX2_5end | |||
|id=chr10:124907645..124907660,+ | |||
|ontology_enrichment_celltype=CL:0002535!1.54e-08!2;CL:0002322!1.64e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.70e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!1.37e-07!5;DOID:162!2.60e-07!235;DOID:0050686!3.34e-07!137;DOID:14566!5.04e-07!239;DOID:8692!7.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:630;3.45e-21;1!DOID:0050177;3.45e-21;1!DOID:0050427;3.45e-21;1!DOID:3347;6.31e-21;1!DOID:4362;8.14e-17;5!DOID:8692;1.31e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.45e-21,1;DOID:0050177,3.45e-21,1;DOID:0050427,3.45e-21,1;DOID:3347,5.16e-21,1;DOID:4362,8.14e-17,5;DOID:8692,1.07e-10,31;DOID:1240,1.43e-08,39;DOID:0050686,8.37e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0006955!1.54e-08!2;UBERON:0004801!1.54e-08!2;UBERON:0000013!2.97e-07!5;UBERON:0002410!2.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;3.48e-14;6!UBERON:0001560;3.48e-14;6!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.48e-14,6;UBERON:0001560,3.48e-14,6;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.464775771478074,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4605608427326,22.1979677910152,0,0,1.22896305723383,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,25.5786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.643012593860077,0.962776056180637,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0.184105950251841,0,0,0.127894371303652,1.61737217095023,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14666819616632,0,0,0,0,0.754814217833368,0,0.655678681511872,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8468219076388 | |||
|short_description=p1@HMX2 | |||
}} |
Revision as of 12:10, 10 September 2013
Short description: | p1@HMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HMX2_5end |
Coexpression cluster: | C488_biphenotypic_acute_skeletal_hippocampus_Monocytederived_diaphragm_small |
Association with transcript: | 7bp_to_ENST00000339992, NM_005519, uc001lhc.1_5end |
EntrezGene: | HMX2 |
HGNC: | 5018 |
UniProt: | A2RU54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 3.48e-14 | 6 |
neck of organ | 3.48e-14 | 6 |
uterine epithelium | 3.70e-11 | 2 |
cervix epithelium | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.45e-21 | 1 |
monogenic disease | 3.45e-21 | 1 |
xeroderma pigmentosum | 3.45e-21 | 1 |
osteosarcoma | 5.16e-21 | 1 |
cervical cancer | 8.14e-17 | 5 |
myeloid leukemia | 1.07e-10 | 31 |
leukemia | 1.43e-08 | 39 |
organ system cancer | 8.37e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.