FFCP PHASE1:Hg19::chr10:125623630..125623648,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C68|description=CAGE_peak_at_chr10:125623630..125623648,-|id=chr10:125623630..125623648,-|ontology_enrichment_celltype=CL:0002537!5.59e-17!5;CL:0000349!1.12e-12!3;CL:0002577!1.12e-12!3|ontology_enrichment_celltype_v019=CL:0002537;1.15e-51;5!CL:0000349;2.06e-37;19!CL:0002541;1.09e-10;3!CL:0002577;1.09e-10;3!CL:0002178;1.09e-10;3!CL:0000134;8.49e-07;55|ontology_enrichment_celltype_v019_2=CL:0002537,1.15e-51,5;CL:0000349,2.06e-37,19;CL:0002541,9.90e-11,3;CL:0002178,1.09e-10,3;CL:0002577,1.20e-10,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5093!6.93e-10!4;DOID:1612!6.93e-10!4|ontology_enrichment_disease_v019=DOID:3493;2.37e-15;2!DOID:5093;2.11e-08;4!DOID:1612;2.11e-08;4|ontology_enrichment_disease_v019_2=DOID:3493,2.37e-15,2;DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4|ontology_enrichment_uberon=UBERON:0005631!3.37e-39!14;UBERON:0000158!3.37e-39!14;UBERON:0000478!1.76e-22!24;UBERON:0000305!1.08e-20!7;UBERON:0003124!3.78e-20!7;UBERON:0001987!5.24e-20!4;UBERON:0004340!5.24e-20!4;UBERON:0004871!3.88e-18!8;UBERON:0001723!1.26e-12!3;UBERON:0001033!1.26e-12!3;UBERON:0010056!1.26e-12!3;UBERON:0007029!3.10e-10!1;UBERON:0000995!4.80e-10!21;UBERON:0005795!1.40e-09!22;UBERON:0003975!1.40e-09!22;UBERON:0004923!7.08e-09!57;UBERON:0004175!2.06e-08!25|ontology_enrichment_uberon_v019=UBERON:0005631;1.25e-45;10!UBERON:0000158;1.25e-45;10!UBERON:0000305;3.40e-37;7!UBERON:0000478;9.72e-30;24!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0001987;2.43e-08;4!UBERON:0000945;6.39e-07;5!UBERON:0010039;6.39e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.52e-50,14;UBERON:0000158,1.52e-50,14;UBERON:0000305,3.40e-37,7;UBERON:0004871,1.15e-32,8;UBERON:0000478,9.72e-30,24;UBERON:0003124,5.13e-17,7;UBERON:0004923,4.40e-11,66;UBERON:0000920,9.90e-11,3;UBERON:0001987,2.61e-08,4;UBERON:0004340,2.61e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59480145055684,6.53322297831805,14.4365529986639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:125623630..125623648,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr10:125623630..125623648,- | |||
|id=chr10:125623630..125623648,- | |||
|ontology_enrichment_celltype=CL:0002537!5.59e-17!5;CL:0000349!1.12e-12!3;CL:0002577!1.12e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.15e-51;5!CL:0000349;2.06e-37;19!CL:0002541;1.09e-10;3!CL:0002577;1.09e-10;3!CL:0002178;1.09e-10;3!CL:0000134;8.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.15e-51,5;CL:0000349,2.06e-37,19;CL:0002541,9.90e-11,3;CL:0002178,1.09e-10,3;CL:0002577,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!6.93e-10!4;DOID:1612!6.93e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.37e-15;2!DOID:5093;2.11e-08;4!DOID:1612;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.37e-15,2;DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.37e-39!14;UBERON:0000158!3.37e-39!14;UBERON:0000478!1.76e-22!24;UBERON:0000305!1.08e-20!7;UBERON:0003124!3.78e-20!7;UBERON:0001987!5.24e-20!4;UBERON:0004340!5.24e-20!4;UBERON:0004871!3.88e-18!8;UBERON:0001723!1.26e-12!3;UBERON:0001033!1.26e-12!3;UBERON:0010056!1.26e-12!3;UBERON:0007029!3.10e-10!1;UBERON:0000995!4.80e-10!21;UBERON:0005795!1.40e-09!22;UBERON:0003975!1.40e-09!22;UBERON:0004923!7.08e-09!57;UBERON:0004175!2.06e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.25e-45;10!UBERON:0000158;1.25e-45;10!UBERON:0000305;3.40e-37;7!UBERON:0000478;9.72e-30;24!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3!UBERON:0001987;2.43e-08;4!UBERON:0000945;6.39e-07;5!UBERON:0010039;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.52e-50,14;UBERON:0000158,1.52e-50,14;UBERON:0000305,3.40e-37,7;UBERON:0004871,1.15e-32,8;UBERON:0000478,9.72e-30,24;UBERON:0003124,5.13e-17,7;UBERON:0004923,4.40e-11,66;UBERON:0000920,9.90e-11,3;UBERON:0001987,2.61e-08,4;UBERON:0004340,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59480145055684,6.53322297831805,14.4365529986639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:125623630..125623648,- | |||
}} |
Revision as of 12:10, 10 September 2013
Short description: | p@chr10:125623630..125623648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:125623630..125623648, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.15e-51 | 5 |
extraembryonic cell | 2.06e-37 | 19 |
chorionic membrane mesenchymal stem cell | 9.90e-11 | 3 |
epithelial cell of stomach | 1.09e-10 | 3 |
placental epithelial cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.52e-50 | 14 |
membranous layer | 1.52e-50 | 14 |
amnion | 3.40e-37 | 7 |
somatic layer of lateral plate mesoderm | 1.15e-32 | 8 |
extraembryonic structure | 9.72e-30 | 24 |
chorion | 5.13e-17 | 7 |
organ component layer | 4.40e-11 | 66 |
egg chorion | 9.90e-11 | 3 |
placenta | 2.61e-08 | 4 |
allantois | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.37e-15 | 2 |
thoracic cancer | 2.11e-08 | 4 |
breast cancer | 2.11e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.