FFCP PHASE1:Hg19::chr10:126234615..126234639,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64077|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30042|TSSclassifier=S|UniProt=|association_with_transcript=21bp_to_ENST00000482963_5end|coexpression_cluster_id=C1568|description=CAGE_peak_6_at_LHPP_5end|id=chr10:126234615..126234639,+|ontology_enrichment_celltype=CL:0000236!5.61e-38!14;CL:0000945!7.26e-32!24;CL:0000826!7.26e-32!24;CL:0000838!2.07e-12!52;CL:0000542!4.24e-12!53;CL:0000051!4.24e-12!53;CL:0002087!1.91e-07!119;CL:0000785!2.13e-07!2;CL:0000955!2.13e-07!2;CL:0000818!2.13e-07!2;CL:0000954!2.13e-07!2;CL:0000816!2.13e-07!2|ontology_enrichment_celltype_v019=CL:0000236;2.38e-71;13!CL:0000945;1.23e-51;24!CL:0000542;1.46e-18;53!CL:0000785;7.21e-08;1!CL:0000819;7.21e-08;1|ontology_enrichment_celltype_v019_2=CL:0000236,4.63e-66,14;CL:0000945,1.35e-51,24;CL:0000826,1.35e-51,24;CL:0000838,2.58e-22,52;CL:0000542,7.67e-22,53;CL:0000051,7.67e-22,53;CL:0002087,2.58e-11,115;CL:0002031,2.67e-09,120;CL:0000738,4.33e-09,136;CL:0000819,7.45e-08,1;CL:0000037,8.94e-07,168|ontology_enrichment_development_v019=CL:0000051;1.46e-18;53!UBERON:0009143;1.54e-07;1!UBERON:0001045;1.54e-07;1!UBERON:0006298;1.54e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;7.21e-08;1!DOID:8675;7.21e-08;1|ontology_enrichment_disease_v019_2=DOID:0060073,7.45e-08,1;DOID:8675,7.45e-08,1|ontology_enrichment_uberon=UBERON:0007023!6.14e-17!115;UBERON:0000178!2.09e-15!15;UBERON:0000179!2.09e-15!15;UBERON:0000463!2.09e-15!15;UBERON:0003408!2.66e-07!10;UBERON:0001829!3.01e-07!2;UBERON:0004177!5.70e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;2.55e-10;15!UBERON:0000179;2.55e-10;15!UBERON:0000463;2.55e-10;15!UBERON:0002372;4.98e-08;1!UBERON:0001961;4.98e-08;1!UBERON:0001744;4.98e-08;1!UBERON:0001042;4.98e-08;1!UBERON:0001735;4.98e-08;1!UBERON:0000029;1.07e-07;1!UBERON:0001154;1.54e-07;1!UBERON:0001736;1.54e-07;1!UBERON:0001153;1.54e-07;1!UBERON:0009854;1.54e-07;1!UBERON:0002193;8.68e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.19e-10,15;UBERON:0000179,2.19e-10,15;UBERON:0000463,2.19e-10,15;UBERON:0002372,4.66e-08,1;UBERON:0001961,4.66e-08,1;UBERON:0001744,4.66e-08,1;UBERON:0001735,4.66e-08,1;UBERON:0000029,1.04e-07,1;UBERON:0001736,1.26e-07,1;UBERON:0006298,1.26e-07,1;UBERON:0001154,1.54e-07,1;UBERON:0001153,1.54e-07,1;UBERON:0001045,1.54e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,11.3876784853043,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,8.79981222306614,12.561188059029,5.33705552318133,7.25441378363062,14.8146515203325,12.6445536789986,13.2208974556972,8.58648379081828,25.0453706408157,12.9192181661607,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,2.27858874869665,1.90585420366231,3.29089818468955,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,5.29118888725431,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,2.97699613087171,0,18.3906823555153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6715382601855,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17021971490014,0,0.218559560503957,0,0,0,0,0,0,0,4.69919589899268,0.322289439867886,0,0,0,0,0,1.83491713361816,0,0,0,0,0.529026840515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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30042 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000482963_5end | |||
|coexpression_cluster_id=C1568 | |||
|description=CAGE_peak_6_at_LHPP_5end | |||
|id=chr10:126234615..126234639,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.61e-38!14;CL:0000945!7.26e-32!24;CL:0000826!7.26e-32!24;CL:0000838!2.07e-12!52;CL:0000542!4.24e-12!53;CL:0000051!4.24e-12!53;CL:0002087!1.91e-07!119;CL:0000785!2.13e-07!2;CL:0000955!2.13e-07!2;CL:0000818!2.13e-07!2;CL:0000954!2.13e-07!2;CL:0000816!2.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.38e-71;13!CL:0000945;1.23e-51;24!CL:0000542;1.46e-18;53!CL:0000785;7.21e-08;1!CL:0000819;7.21e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.63e-66,14;CL:0000945,1.35e-51,24;CL:0000826,1.35e-51,24;CL:0000838,2.58e-22,52;CL:0000542,7.67e-22,53;CL:0000051,7.67e-22,53;CL:0002087,2.58e-11,115;CL:0002031,2.67e-09,120;CL:0000738,4.33e-09,136;CL:0000819,7.45e-08,1;CL:0000037,8.94e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;1.46e-18;53!UBERON:0009143;1.54e-07;1!UBERON:0001045;1.54e-07;1!UBERON:0006298;1.54e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.21e-08;1!DOID:8675;7.21e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.45e-08,1;DOID:8675,7.45e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-17!115;UBERON:0000178!2.09e-15!15;UBERON:0000179!2.09e-15!15;UBERON:0000463!2.09e-15!15;UBERON:0003408!2.66e-07!10;UBERON:0001829!3.01e-07!2;UBERON:0004177!5.70e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.55e-10;15!UBERON:0000179;2.55e-10;15!UBERON:0000463;2.55e-10;15!UBERON:0002372;4.98e-08;1!UBERON:0001961;4.98e-08;1!UBERON:0001744;4.98e-08;1!UBERON:0001042;4.98e-08;1!UBERON:0001735;4.98e-08;1!UBERON:0000029;1.07e-07;1!UBERON:0001154;1.54e-07;1!UBERON:0001736;1.54e-07;1!UBERON:0001153;1.54e-07;1!UBERON:0009854;1.54e-07;1!UBERON:0002193;8.68e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.19e-10,15;UBERON:0000179,2.19e-10,15;UBERON:0000463,2.19e-10,15;UBERON:0002372,4.66e-08,1;UBERON:0001961,4.66e-08,1;UBERON:0001744,4.66e-08,1;UBERON:0001735,4.66e-08,1;UBERON:0000029,1.04e-07,1;UBERON:0001736,1.26e-07,1;UBERON:0006298,1.26e-07,1;UBERON:0001154,1.54e-07,1;UBERON:0001153,1.54e-07,1;UBERON:0001045,1.54e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,11.3876784853043,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,8.79981222306614,12.561188059029,5.33705552318133,7.25441378363062,14.8146515203325,12.6445536789986,13.2208974556972,8.58648379081828,25.0453706408157,12.9192181661607,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,2.27858874869665,1.90585420366231,3.29089818468955,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,5.29118888725431,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,2.97699613087171,0,18.3906823555153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6715382601855,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17021971490014,0,0.218559560503957,0,0,0,0,0,0,0,4.69919589899268,0.322289439867886,0,0,0,0,0,1.83491713361816,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.217716747896961,0,11.7192572245382,1.07583308089015,0,0,0,0,0,0,0,0,0,13.4853441705988,0.320568492303233 | |||
|short_description=p6@LHPP | |||
}} |
Revision as of 12:12, 10 September 2013
Short description: | p6@LHPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LHPP_5end |
Coexpression cluster: | C1568_lymphoma_CD19_vein_tonsil_Burkitt_non_diffuse |
Association with transcript: | 21bp_to_ENST00000482963_5end |
EntrezGene: | LHPP |
HGNC: | 30042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.63e-66 | 14 |
lymphocyte of B lineage | 1.35e-51 | 24 |
pro-B cell | 1.35e-51 | 24 |
lymphoid lineage restricted progenitor cell | 2.58e-22 | 52 |
lymphocyte | 7.67e-22 | 53 |
common lymphoid progenitor | 7.67e-22 | 53 |
nongranular leukocyte | 2.58e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.67e-09 | 120 |
leukocyte | 4.33e-09 | 136 |
B-1 B cell | 7.45e-08 | 1 |
hematopoietic stem cell | 8.94e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 2.19e-10 | 15 |
haemolymphatic fluid | 2.19e-10 | 15 |
organism substance | 2.19e-10 | 15 |
tonsil | 4.66e-08 | 1 |
mucosa-associated lymphoid tissue | 4.66e-08 | 1 |
lymphoid tissue | 4.66e-08 | 1 |
tonsillar ring | 4.66e-08 | 1 |
lymph node | 1.04e-07 | 1 |
submandibular gland | 1.26e-07 | 1 |
submandibular gland primordium | 1.26e-07 | 1 |
vermiform appendix | 1.54e-07 | 1 |
caecum | 1.54e-07 | 1 |
midgut | 1.54e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.45e-08 | 1 |
lymphosarcoma | 7.45e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.