FFCP PHASE1:Hg19::chr10:28287818..28287850,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55130|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=25583|TSSclassifier=S|UniProt=|association_with_transcript=-27bp_to_uc009xky.2_5end|description=CAGE_peak_2_at_ARMC4_5end|id=chr10:28287818..28287850,-|ontology_enrichment_celltype=CL:0002620!2.63e-09!23;CL:0000055!5.27e-07!180|ontology_enrichment_celltype_v019=CL:0002620;2.51e-17;23!CL:0002622;2.34e-09;3!CL:0002618;2.77e-08;3|ontology_enrichment_celltype_v019_2=CL:0002620,2.12e-17,23;CL:0002622,4.17e-09,3;CL:0002618,2.09e-08,3|ontology_enrichment_development_v019=UBERON:0006238;2.16e-08;10|ontology_enrichment_disease=DOID:14566!2.50e-07!239|ontology_enrichment_disease_v019=DOID:17;5.95e-09;5!DOID:450;5.95e-09;5!DOID:66;5.95e-09;5!DOID:423;5.95e-09;5!DOID:0080000;5.95e-09;5!DOID:11722;5.95e-09;5!DOID:3093;1.24e-07;11!DOID:3307;2.77e-07;2|ontology_enrichment_disease_v019_2=DOID:17,6.96e-09,5;DOID:450,6.96e-09,5;DOID:66,6.96e-09,5;DOID:423,6.96e-09,5;DOID:0080000,6.96e-09,5;DOID:11722,6.96e-09,5;DOID:3093,1.93e-07,11;DOID:3307,2.78e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002097;8.37e-09;41!UBERON:0000007;3.76e-07;2!UBERON:0001737;6.57e-07;9!UBERON:0001557;6.57e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.60e-11,41;UBERON:0002199,1.08e-09,46;UBERON:0002416,1.08e-09,46;UBERON:0003102,1.17e-07,99;UBERON:0000007,4.20e-07,2;UBERON:0001737,6.70e-07,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,1.69592382577203,0.419499436209906,0,0,0.775250277507987,0,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0,1.87529429396568,1.12264686313085,1.68917220724983,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0.469737994575059,0.161872944368132,0.421352420106746,0,0.368502951935304,0.206651562351531,2.37600571456411,0.741800787835671,0,0.718618141816238,0,0.500474079487857,0.831192346452549,0,0.30648779579902,0.901428353439581,0,1.07633781413317,2.34913127700424,0.847727604638247,1.80054657650641,2.26715564324566,5.66809188100384,6.14185625894246,1.35021065793013,0.0974370051611986,1.26216887122057,2.11714766877288,0,2.4850671476163,1.91428986632517,1.52604533079439,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,1.28648187638577,0,0,0,0.354920400119532,1.18009283054671,1.44606617930089,0.992645754591546,0,1.42362371466658,1.21348177344148,1.76599318612811,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,1.06375246633948,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,1.74306691720059,0.699810938274399,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.271265023699736,0.415941723061614,0.892144943985809,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,2.60650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,2.18147451512753,2.1850940160806,2.09799063935079,0,0,0,0,0.633309773357254,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,1.30151357865721,0,0.457847324091717,0.330037999682352,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0.214840489736547,1.74020032697074,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0.359744915166629,2.19629623788844,0.353437207037059,0,0,0,0,0.487426979262569,0,2.8664981395677,0.282810863907425,0,0,0,0,0,0,0,0,0,0.717056761020258,0.294747123039363,0,0.354761064070598,1.47775344708365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,1.13826949357463,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,3.43505344755765,0.307240764308458,0.223676107892416,0.667396566847634,0.390776190804081,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,5.56543525114529,0,0.211125408127993,0,0.552567831062295,0.755798243562828,1.84083628503879,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0.980446171670911,0.278847488557207,0.307801034015188,3.76008784295104,0,0,0,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,2.53197677433632,0.489698424477443,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25583 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_uc009xky.2_5end | |||
|description=CAGE_peak_2_at_ARMC4_5end | |||
|id=chr10:28287818..28287850,- | |||
|ontology_enrichment_celltype=CL:0002620!2.63e-09!23;CL:0000055!5.27e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.51e-17;23!CL:0002622;2.34e-09;3!CL:0002618;2.77e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.12e-17,23;CL:0002622,4.17e-09,3;CL:0002618,2.09e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-08;10 | |||
|ontology_enrichment_disease=DOID:14566!2.50e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:17;5.95e-09;5!DOID:450;5.95e-09;5!DOID:66;5.95e-09;5!DOID:423;5.95e-09;5!DOID:0080000;5.95e-09;5!DOID:11722;5.95e-09;5!DOID:3093;1.24e-07;11!DOID:3307;2.77e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.96e-09,5;DOID:450,6.96e-09,5;DOID:66,6.96e-09,5;DOID:423,6.96e-09,5;DOID:0080000,6.96e-09,5;DOID:11722,6.96e-09,5;DOID:3093,1.93e-07,11;DOID:3307,2.78e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.37e-09;41!UBERON:0000007;3.76e-07;2!UBERON:0001737;6.57e-07;9!UBERON:0001557;6.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.60e-11,41;UBERON:0002199,1.08e-09,46;UBERON:0002416,1.08e-09,46;UBERON:0003102,1.17e-07,99;UBERON:0000007,4.20e-07,2;UBERON:0001737,6.70e-07,9 | |||
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| |||
|short_description=p2@ARMC4 | |||
}} |
Revision as of 13:01, 10 September 2013
Short description: | p2@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_uc009xky.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.12e-17 | 23 |
prostate stromal cell | 4.17e-09 | 3 |
endothelial cell of umbilical vein | 2.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.60e-11 | 41 |
integument | 1.08e-09 | 46 |
integumental system | 1.08e-09 | 46 |
surface structure | 1.17e-07 | 99 |
pituitary gland | 4.20e-07 | 2 |
larynx | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.96e-09 | 5 |
myotonic disease | 6.96e-09 | 5 |
muscle tissue disease | 6.96e-09 | 5 |
myopathy | 6.96e-09 | 5 |
muscular disease | 6.96e-09 | 5 |
myotonic dystrophy | 6.96e-09 | 5 |
nervous system cancer | 1.93e-07 | 11 |
teratoma | 2.78e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.