FFCP PHASE1:Hg19::chr10:90750752..90750755,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=59|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=130|TSSclassifier=S|UniProt=F6UVQ4|association_with_transcript=340bp_to_ENST00000415557_5end|description=CAGE_peak_14_at_ACTA2_5end|id=chr10:90750752..90750755,-|ontology_enrichment_celltype=CL:0000055!1.03e-12!180;CL:0000183!9.11e-08!59;CL:0000057!2.69e-07!75;CL:0000187!8.19e-07!54|ontology_enrichment_celltype_v019=CL:0002521;9.91e-26;3!CL:0000214;5.56e-12;3!CL:0000136;1.28e-10;13!CL:0002574;5.07e-10;1!CL:0002591;1.30e-09;1!CL:0000153;7.95e-09;9!CL:0000447;7.95e-09;9!CL:0000499;2.67e-07;28|ontology_enrichment_celltype_v019_2=CL:0002521,5.75e-26,3;CL:0000214,3.77e-12,3;CL:0002574,5.79e-10,1;CL:0002591,1.62e-09,1;CL:0000136,2.80e-09,15;CL:0000153,8.30e-09,9;CL:0000447,8.30e-09,9;CL:0000499,2.55e-07,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.22e-07!95;UBERON:0002385!8.71e-07!63;UBERON:0001015!8.71e-07!63;UBERON:0000383!8.71e-07!63|ontology_enrichment_uberon_v019=UBERON:0002072;6.39e-27;5!UBERON:0002190;9.91e-26;3!UBERON:0006915;5.56e-12;3!UBERON:0007616;5.56e-12;3!UBERON:0002217;5.56e-12;3!UBERON:0002018;5.56e-12;3!UBERON:0001013;6.67e-10;14!UBERON:0004457;5.90e-09;9!UBERON:0000042;5.90e-09;9|ontology_enrichment_uberon_v019_2=UBERON:0002072,4.02e-27,5;UBERON:0002190,5.75e-26,3;UBERON:0006915,3.77e-12,3;UBERON:0007616,3.77e-12,3;UBERON:0002217,3.77e-12,3;UBERON:0002018,3.77e-12,3;UBERON:0001013,5.68e-10,14;UBERON:0004457,6.90e-07,12;UBERON:0000042,6.90e-07,12|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,2.23480547213644,0.872338524100369,2.53299878168311,1.26343974685366,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.573673241497627,0.354668382198357,1.12135520028461,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0.896692083310806,0,0,0,0.204154171254893,0,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0,0.427114777637135,0.423863802319124,0,0.824420233907511,0,0,0,0.292311015483596,0,0.0920498986422993,0.484938170456436,0,0.503760491138201,0,0.193260853163297,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0.258543431515556,3.57656445851882,0,0.531876233169741,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.601892199455438,2.27407504055985,1.03473071292505,0,0,2.08520674723399,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.841980283299221,0.512556597022804,0,0.160853921143607,0,0,1.24293207719189,0.574890092096664,1.03850885836724,0.697262270759755,0,0,0.0920809889358963,0.574072240823034,0.182091168006717,1.70461739447251,0,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,1.54673149267395,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.0852266274161009,0.445160178233687,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.848432591722276,1.13008116620243,0.551365343546124,0,0.876901770507525,1.73632660280006,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,1.26664581178598,1.31717957183961,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,3.08909847366257,0.104421949505455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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=59 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |||
|TSSclassifier=S | |||
|UniProt=F6UVQ4 | |||
|association_with_transcript=340bp_to_ENST00000415557_5end | |||
|description=CAGE_peak_14_at_ACTA2_5end | |||
|id=chr10:90750752..90750755,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-12!180;CL:0000183!9.11e-08!59;CL:0000057!2.69e-07!75;CL:0000187!8.19e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002521;9.91e-26;3!CL:0000214;5.56e-12;3!CL:0000136;1.28e-10;13!CL:0002574;5.07e-10;1!CL:0002591;1.30e-09;1!CL:0000153;7.95e-09;9!CL:0000447;7.95e-09;9!CL:0000499;2.67e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,5.75e-26,3;CL:0000214,3.77e-12,3;CL:0002574,5.79e-10,1;CL:0002591,1.62e-09,1;CL:0000136,2.80e-09,15;CL:0000153,8.30e-09,9;CL:0000447,8.30e-09,9;CL:0000499,2.55e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.22e-07!95;UBERON:0002385!8.71e-07!63;UBERON:0001015!8.71e-07!63;UBERON:0000383!8.71e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;6.39e-27;5!UBERON:0002190;9.91e-26;3!UBERON:0006915;5.56e-12;3!UBERON:0007616;5.56e-12;3!UBERON:0002217;5.56e-12;3!UBERON:0002018;5.56e-12;3!UBERON:0001013;6.67e-10;14!UBERON:0004457;5.90e-09;9!UBERON:0000042;5.90e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,4.02e-27,5;UBERON:0002190,5.75e-26,3;UBERON:0006915,3.77e-12,3;UBERON:0007616,3.77e-12,3;UBERON:0002217,3.77e-12,3;UBERON:0002018,3.77e-12,3;UBERON:0001013,5.68e-10,14;UBERON:0004457,6.90e-07,12;UBERON:0000042,6.90e-07,12 | |||
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|short_description=p14@ACTA2 | |||
}} |
Revision as of 14:52, 10 September 2013
Short description: | p14@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_ACTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 340bp_to_ENST00000415557_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 5.75e-26 | 3 |
synovial cell | 3.77e-12 | 3 |
stromal cell of pancreas | 5.79e-10 | 1 |
smooth muscle cell of the pulmonary artery | 1.62e-09 | 1 |
fat cell | 2.80e-09 | 15 |
GAG secreting cell | 8.30e-09 | 9 |
carbohydrate secreting cell | 8.30e-09 | 9 |
stromal cell | 2.55e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 4.02e-27 | 5 |
subcutaneous adipose tissue | 5.75e-26 | 3 |
stratified squamous epithelium | 3.77e-12 | 3 |
layer of synovial tissue | 3.77e-12 | 3 |
synovial joint | 3.77e-12 | 3 |
synovial membrane of synovial joint | 3.77e-12 | 3 |
adipose tissue | 5.68e-10 | 14 |
cavity lining | 6.90e-07 | 12 |
serous membrane | 6.90e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.