FFCP PHASE1:Hg19::chr11:102980234..102980243,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2962|TSSclassifier=S|UniProt=|association_with_transcript=-7bp_to_ENST00000334267_5end|coexpression_cluster_id=C3072|description=CAGE_peak_5_at_DYNC2H1_5end|id=chr11:102980234..102980243,+|ontology_enrichment_celltype=CL:0000055!3.23e-08!180|ontology_enrichment_celltype_v019=CL:0000346;7.26e-16;3!CL:1000428;7.26e-16;3!CL:0002601;2.91e-12;1!CL:1000306;3.09e-12;4!CL:0002547;3.09e-12;4!CL:0002559;6.80e-10;5!CL:0002540;2.17e-08;6!CL:0002535;4.55e-07;2|ontology_enrichment_celltype_v019_2=CL:0000346,6.26e-16,3;CL:1000428,6.26e-16,3;CL:1000306,3.65e-12,4;CL:0002547,3.65e-12,4;CL:0002601,4.31e-12,1;CL:0002559,6.22e-10,5;CL:0002540,2.25e-08,6;CL:0002535,4.56e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.68e-08!365;UBERON:0000924!7.93e-07!173;UBERON:0006601!7.93e-07!173|ontology_enrichment_uberon_v019=UBERON:0000007;4.13e-23;2!UBERON:0000412;7.26e-16;3!UBERON:0001992;7.26e-16;3!UBERON:0004797;3.09e-12;4!UBERON:0000415;3.09e-12;4!UBERON:0007240;3.09e-12;4!UBERON:0005742;3.09e-12;4!UBERON:0005734;3.09e-12;4!UBERON:0004664;3.09e-12;4!UBERON:0004663;3.09e-12;4!UBERON:0003296;4.69e-12;4!UBERON:0010133;4.69e-12;4!UBERON:0002073;6.80e-10;5!UBERON:0001894;2.91e-07;7!UBERON:0006955;4.55e-07;2!UBERON:0004801;4.55e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.91e-23,2;UBERON:0000412,6.26e-16,3;UBERON:0001992,6.26e-16,3;UBERON:0000415,3.65e-12,4;UBERON:0007240,3.65e-12,4;UBERON:0005742,3.65e-12,4;UBERON:0005734,3.65e-12,4;UBERON:0004664,3.65e-12,4;UBERON:0004663,3.65e-12,4;UBERON:0003296,4.57e-12,4;UBERON:0010133,4.57e-12,4;UBERON:0002073,6.22e-10,5;UBERON:0005086,6.22e-10,5;UBERON:0004797,2.52e-07,7;UBERON:0001894,2.86e-07,7;UBERON:0006222,2.86e-07,7;UBERON:0006955,4.56e-07,2;UBERON:0004801,4.56e-07,2|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,2.29469296599051,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.587172493218824,0.323745888736263,0.561803226808994,0.61246251376468,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0,0,0.600182192168805,0.412210116953756,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0.484938170456436,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,3.12899064659632,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.402115889646523,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0,0,0,0.567100388969546,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.317489471460845,0,0,0,0,0.300343057843917,0.857479297891735,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.315404830067869,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0,0,0.462629081407967,0,0.410635780069046,0,0.232420756919918,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.460511024178389,0.413509717453592,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.43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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2962 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000334267_5end | |||
|coexpression_cluster_id=C3072 | |||
|description=CAGE_peak_5_at_DYNC2H1_5end | |||
|id=chr11:102980234..102980243,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.26e-16;3!CL:1000428;7.26e-16;3!CL:0002601;2.91e-12;1!CL:1000306;3.09e-12;4!CL:0002547;3.09e-12;4!CL:0002559;6.80e-10;5!CL:0002540;2.17e-08;6!CL:0002535;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.26e-16,3;CL:1000428,6.26e-16,3;CL:1000306,3.65e-12,4;CL:0002547,3.65e-12,4;CL:0002601,4.31e-12,1;CL:0002559,6.22e-10,5;CL:0002540,2.25e-08,6;CL:0002535,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.68e-08!365;UBERON:0000924!7.93e-07!173;UBERON:0006601!7.93e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.13e-23;2!UBERON:0000412;7.26e-16;3!UBERON:0001992;7.26e-16;3!UBERON:0004797;3.09e-12;4!UBERON:0000415;3.09e-12;4!UBERON:0007240;3.09e-12;4!UBERON:0005742;3.09e-12;4!UBERON:0005734;3.09e-12;4!UBERON:0004664;3.09e-12;4!UBERON:0004663;3.09e-12;4!UBERON:0003296;4.69e-12;4!UBERON:0010133;4.69e-12;4!UBERON:0002073;6.80e-10;5!UBERON:0001894;2.91e-07;7!UBERON:0006955;4.55e-07;2!UBERON:0004801;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.91e-23,2;UBERON:0000412,6.26e-16,3;UBERON:0001992,6.26e-16,3;UBERON:0000415,3.65e-12,4;UBERON:0007240,3.65e-12,4;UBERON:0005742,3.65e-12,4;UBERON:0005734,3.65e-12,4;UBERON:0004664,3.65e-12,4;UBERON:0004663,3.65e-12,4;UBERON:0003296,4.57e-12,4;UBERON:0010133,4.57e-12,4;UBERON:0002073,6.22e-10,5;UBERON:0005086,6.22e-10,5;UBERON:0004797,2.52e-07,7;UBERON:0001894,2.86e-07,7;UBERON:0006222,2.86e-07,7;UBERON:0006955,4.56e-07,2;UBERON:0004801,4.56e-07,2 | |||
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| |||
|short_description=p5@DYNC2H1 | |||
}} |
Revision as of 15:24, 10 September 2013
Short description: | p5@DYNC2H1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DYNC2H1_5end |
Coexpression cluster: | C3072_epidermoid_Fibroblast_neuroectodermal_Small_Skeletal_Smooth_embryonic |
Association with transcript: | -7bp_to_ENST00000334267_5end |
EntrezGene: | DYNC2H1 |
HGNC: | 2962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.26e-16 | 3 |
stem cell of epidermis | 6.26e-16 | 3 |
fibroblast of tunica adventitia of artery | 3.65e-12 | 4 |
fibroblast of the aortic adventitia | 3.65e-12 | 4 |
uterine smooth muscle cell | 4.31e-12 | 1 |
hair follicle cell | 6.22e-10 | 5 |
mesenchymal stem cell of the bone marrow | 2.25e-08 | 6 |
epithelial cell of cervix | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.91e-23 | 2 |
dermal papilla | 6.26e-16 | 3 |
papillary layer of dermis | 6.26e-16 | 3 |
artery wall | 3.65e-12 | 4 |
tunica adventitia of artery | 3.65e-12 | 4 |
adventitia | 3.65e-12 | 4 |
tunica adventitia of blood vessel | 3.65e-12 | 4 |
aorta tunica adventitia | 3.65e-12 | 4 |
aorta wall | 3.65e-12 | 4 |
gland of diencephalon | 4.57e-12 | 4 |
neuroendocrine gland | 4.57e-12 | 4 |
hair follicle | 6.22e-10 | 5 |
hair follicle placode | 6.22e-10 | 5 |
blood vessel layer | 2.52e-07 | 7 |
diencephalon | 2.86e-07 | 7 |
future diencephalon | 2.86e-07 | 7 |
uterine epithelium | 4.56e-07 | 2 |
cervix epithelium | 4.56e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.