FFCP PHASE1:Hg19::chr11:119039032..119039058,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29890|TSSclassifier=S|UniProt=C9JQE9|association_with_transcript=0bp_to_ENST00000449394_5end|coexpression_cluster_id=C683|description=CAGE_peak_5_at_NLRX1_5end|id=chr11:119039032..119039058,+|ontology_enrichment_celltype=CL:0002076!1.15e-15!43;CL:0000244!1.31e-13!4;CL:0000731!1.31e-13!4;CL:0002368!2.05e-11!13;CL:0000622!8.08e-11!5;CL:0002623!1.91e-10!3;CL:0000223!2.18e-10!59;CL:0000154!5.07e-09!6;CL:0002159!5.46e-09!13;CL:0002251!7.77e-09!21;CL:0000575!2.14e-08!2;CL:0000066!7.75e-08!254|ontology_enrichment_celltype_v019=CL:0000575;6.23e-17;2!CL:0002252;4.19e-09;1!CL:0002159;4.73e-09;14!CL:0000244;2.22e-08;4!CL:0000731;2.22e-08;4!CL:0002537;3.68e-07;5!CL:0000622;6.09e-07;5|ontology_enrichment_celltype_v019_2=CL:0000575,5.76e-17,2;CL:0002252,3.58e-09,1;CL:0002159,4.88e-09,14;CL:0000244,1.98e-08,4;CL:0000731,1.98e-08,4;CL:0002537,3.57e-07,5;CL:0000622,6.76e-07,5|ontology_enrichment_development_v019=UBERON:0009143;1.81e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;5.75e-09;1!DOID:3149;5.75e-09;1|ontology_enrichment_disease_v019_2=DOID:3151,5.31e-09,1;DOID:3149,5.31e-09,1|ontology_enrichment_uberon=UBERON:0004119!7.95e-15!169;UBERON:0000925!7.95e-15!169;UBERON:0006595!7.95e-15!169;UBERON:0001004!2.55e-13!72;UBERON:0000166!1.48e-11!21;UBERON:0000161!4.57e-11!35;UBERON:0000365!6.74e-11!5;UBERON:0000165!3.47e-10!28;UBERON:0000930!3.47e-10!28;UBERON:0003102!3.17e-09!95;UBERON:0000065!4.37e-09!53;UBERON:0005910!4.37e-09!6;UBERON:0001042!2.42e-08!10;UBERON:0009145!2.42e-08!10;UBERON:0007196!3.34e-08!14;UBERON:0001558!3.34e-08!14;UBERON:0003126!5.20e-08!7;UBERON:0001005!5.20e-08!7;UBERON:0003127!5.86e-08!2;UBERON:0005631!7.14e-08!14;UBERON:0000158!7.14e-08!14;UBERON:0000974!9.30e-08!10;UBERON:0000341!1.04e-07!2;UBERON:0001444!1.08e-07!48;UBERON:0003408!1.11e-07!10;UBERON:0000077!1.18e-07!130;UBERON:0006562!1.50e-07!11;UBERON:0001987!1.80e-07!4;UBERON:0004340!1.80e-07!4;UBERON:0003124!2.51e-07!7;UBERON:0001007!4.74e-07!155;UBERON:0001555!4.74e-07!155;UBERON:0007026!4.74e-07!155|ontology_enrichment_uberon_v019=UBERON:0001723;8.80e-12;3!UBERON:0001033;8.80e-12;3!UBERON:0001043;1.53e-11;3!UBERON:0002372;1.81e-09;1!UBERON:0001961;1.81e-09;1!UBERON:0001744;1.81e-09;1!UBERON:0001042;1.81e-09;1!UBERON:0001735;1.81e-09;1!UBERON:0007029;2.40e-09;1!UBERON:0005795;2.82e-09;1!UBERON:0000964;6.48e-09;4!UBERON:0010409;6.48e-09;4!UBERON:0000997;8.82e-09;1!UBERON:0005056;8.82e-09;1!UBERON:0004176;8.82e-09;1!UBERON:0000014;9.56e-09;4!UBERON:0000365;7.18e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001723,8.80e-12,3;UBERON:0001033,8.80e-12,3;UBERON:0010056,8.80e-12,3;UBERON:0001043,1.34e-11,3;UBERON:0009143,1.34e-11,3;UBERON:0002372,1.89e-09,1;UBERON:0001961,1.89e-09,1;UBERON:0001744,1.89e-09,1;UBERON:0001735,1.89e-09,1;UBERON:0007029,2.40e-09,1;UBERON:0000964,6.23e-09,4;UBERON:0010409,6.23e-09,4;UBERON:0004348,6.23e-09,4;UBERON:0005427,6.23e-09,4;UBERON:0000997,7.85e-09,1;UBERON:0005056,7.85e-09,1;UBERON:0000014,9.20e-09,4;UBERON:0001042,7.93e-08,10;UBERON:0009145,7.93e-08,10;UBERON:0006562,3.74e-07,11;UBERON:0000365,6.56e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,9.10738220731355,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19500570817251,0,0.603173834469785,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,1.08890984861323,0,0.43050537267123,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,4.05865624054073,0,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,3.30886111566327,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29890 | |||
|TSSclassifier=S | |||
|UniProt=C9JQE9 | |||
|association_with_transcript=0bp_to_ENST00000449394_5end | |||
|coexpression_cluster_id=C683 | |||
|description=CAGE_peak_5_at_NLRX1_5end | |||
|id=chr11:119039032..119039058,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.15e-15!43;CL:0000244!1.31e-13!4;CL:0000731!1.31e-13!4;CL:0002368!2.05e-11!13;CL:0000622!8.08e-11!5;CL:0002623!1.91e-10!3;CL:0000223!2.18e-10!59;CL:0000154!5.07e-09!6;CL:0002159!5.46e-09!13;CL:0002251!7.77e-09!21;CL:0000575!2.14e-08!2;CL:0000066!7.75e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000575;6.23e-17;2!CL:0002252;4.19e-09;1!CL:0002159;4.73e-09;14!CL:0000244;2.22e-08;4!CL:0000731;2.22e-08;4!CL:0002537;3.68e-07;5!CL:0000622;6.09e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.76e-17,2;CL:0002252,3.58e-09,1;CL:0002159,4.88e-09,14;CL:0000244,1.98e-08,4;CL:0000731,1.98e-08,4;CL:0002537,3.57e-07,5;CL:0000622,6.76e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.81e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.75e-09;1!DOID:3149;5.75e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.31e-09,1;DOID:3149,5.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.95e-15!169;UBERON:0000925!7.95e-15!169;UBERON:0006595!7.95e-15!169;UBERON:0001004!2.55e-13!72;UBERON:0000166!1.48e-11!21;UBERON:0000161!4.57e-11!35;UBERON:0000365!6.74e-11!5;UBERON:0000165!3.47e-10!28;UBERON:0000930!3.47e-10!28;UBERON:0003102!3.17e-09!95;UBERON:0000065!4.37e-09!53;UBERON:0005910!4.37e-09!6;UBERON:0001042!2.42e-08!10;UBERON:0009145!2.42e-08!10;UBERON:0007196!3.34e-08!14;UBERON:0001558!3.34e-08!14;UBERON:0003126!5.20e-08!7;UBERON:0001005!5.20e-08!7;UBERON:0003127!5.86e-08!2;UBERON:0005631!7.14e-08!14;UBERON:0000158!7.14e-08!14;UBERON:0000974!9.30e-08!10;UBERON:0000341!1.04e-07!2;UBERON:0001444!1.08e-07!48;UBERON:0003408!1.11e-07!10;UBERON:0000077!1.18e-07!130;UBERON:0006562!1.50e-07!11;UBERON:0001987!1.80e-07!4;UBERON:0004340!1.80e-07!4;UBERON:0003124!2.51e-07!7;UBERON:0001007!4.74e-07!155;UBERON:0001555!4.74e-07!155;UBERON:0007026!4.74e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.80e-12;3!UBERON:0001033;8.80e-12;3!UBERON:0001043;1.53e-11;3!UBERON:0002372;1.81e-09;1!UBERON:0001961;1.81e-09;1!UBERON:0001744;1.81e-09;1!UBERON:0001042;1.81e-09;1!UBERON:0001735;1.81e-09;1!UBERON:0007029;2.40e-09;1!UBERON:0005795;2.82e-09;1!UBERON:0000964;6.48e-09;4!UBERON:0010409;6.48e-09;4!UBERON:0000997;8.82e-09;1!UBERON:0005056;8.82e-09;1!UBERON:0004176;8.82e-09;1!UBERON:0000014;9.56e-09;4!UBERON:0000365;7.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,8.80e-12,3;UBERON:0001033,8.80e-12,3;UBERON:0010056,8.80e-12,3;UBERON:0001043,1.34e-11,3;UBERON:0009143,1.34e-11,3;UBERON:0002372,1.89e-09,1;UBERON:0001961,1.89e-09,1;UBERON:0001744,1.89e-09,1;UBERON:0001735,1.89e-09,1;UBERON:0007029,2.40e-09,1;UBERON:0000964,6.23e-09,4;UBERON:0010409,6.23e-09,4;UBERON:0004348,6.23e-09,4;UBERON:0005427,6.23e-09,4;UBERON:0000997,7.85e-09,1;UBERON:0005056,7.85e-09,1;UBERON:0000014,9.20e-09,4;UBERON:0001042,7.93e-08,10;UBERON:0009145,7.93e-08,10;UBERON:0006562,3.74e-07,11;UBERON:0000365,6.56e-07,5 | |||
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|short_description=p5@NLRX1 | |||
}} |
Revision as of 16:07, 10 September 2013
Short description: | p5@NLRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NLRX1_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | 0bp_to_ENST00000449394_5end |
EntrezGene: | NLRX1 |
HGNC: | 29890 |
UniProt: | C9JQE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.76e-17 | 2 |
epithelial cell of esophagus | 3.58e-09 | 1 |
general ecto-epithelial cell | 4.88e-09 | 14 |
transitional epithelial cell | 1.98e-08 | 4 |
urothelial cell | 1.98e-08 | 4 |
amnion mesenchymal stem cell | 3.57e-07 | 5 |
acinar cell | 6.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 8.80e-12 | 3 |
gustatory system | 8.80e-12 | 3 |
future tongue | 8.80e-12 | 3 |
esophagus | 1.34e-11 | 3 |
esophageal region | 1.34e-11 | 3 |
tonsil | 1.89e-09 | 1 |
mucosa-associated lymphoid tissue | 1.89e-09 | 1 |
lymphoid tissue | 1.89e-09 | 1 |
tonsillar ring | 1.89e-09 | 1 |
surface | 2.40e-09 | 1 |
cornea | 6.23e-09 | 4 |
eye surface | 6.23e-09 | 4 |
optic eminence | 6.23e-09 | 4 |
corneal primordium | 6.23e-09 | 4 |
mammalian vulva | 7.85e-09 | 1 |
external female genitalia | 7.85e-09 | 1 |
zone of skin | 9.20e-09 | 4 |
chordate pharynx | 7.93e-08 | 10 |
pharyngeal region of foregut | 7.93e-08 | 10 |
pharynx | 3.74e-07 | 11 |
urothelium | 6.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.31e-09 | 1 |
keratoacanthoma | 5.31e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.