FFCP PHASE1:Hg19::chr11:120207300..120207311,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23365|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14193|TSSclassifier=S|UniProt=B4E2K6,Q9NZN5|association_with_transcript=-306bp_to_NM_001198665,NM_015313_5end|coexpression_cluster_id=C17|description=CAGE_peak_6_at_ARHGEF12_5end|id=chr11:120207300..120207311,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;5.35e-07;5|ontology_enrichment_celltype_v019_2=CL:0000515,3.37e-07,4;CL:0000097,5.50e-07,5;CL:0002028,5.50e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.69e-13!115|ontology_enrichment_uberon_v019=UBERON:0000178;5.68e-09;15!UBERON:0000179;5.68e-09;15!UBERON:0000463;5.68e-09;15!UBERON:0001044;2.87e-07;6!UBERON:0003293;2.87e-07;6!UBERON:0003294;2.87e-07;6!UBERON:0010047;2.87e-07;6!UBERON:0003408;2.87e-07;6!UBERON:0000167;2.87e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-09,114;UBERON:0000178,3.83e-09,15;UBERON:0000179,3.83e-09,15;UBERON:0000463,3.83e-09,15;UBERON:0001044,1.93e-07,6;UBERON:0003293,1.93e-07,6;UBERON:0003294,1.93e-07,6;UBERON:0010047,1.93e-07,6;UBERON:0000167,1.93e-07,6|phase1_expression=0.54503513781167,0.428201047781966,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0,1.48519623552056,2.98257638155124,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0.383829398097213,0,0,0,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,1.50401373190767,0.724232594804119,0.795285947051099,0.486634870302636,0.189069634328136,0,0.351339142772504,0.523916301990851,0,0,0,0.174129737299267,0.26591592103773,0,0,0,1.19257444420023,0,0,1.13061588384802,0.838998872419812,0.550236083880135,0.208994966536811,0.775250277507987,1.77883131343355,2.34304428935269,0.805658634218294,0,0.24406205754817,0.367663080345869,0.81014194788176,0.982297011124877,1.12264686313085,0.337834441449967,3.06633274931766,1.89853131913626,0.549605231791222,0,0,0,1.49091585508596,0.379891534993739,1.85372853138506,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.942974704487816,0.490385709340376,0.151357427644931,1.15235184896,0,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.140450806702248,0.816616685019573,0.368502951935304,0.619954687054593,0,1.48360157567134,0,0,0.168336113954066,0,1.10825646193673,0.877955241761676,0.612975591598039,0.600952235626387,0.453728732640084,0.358779271377724,0.85422955527427,0.423863802319124,0,1.03052529238439,1.03056216018252,0.744467425326359,0.675105328965065,0.487185025805993,0.252433774244115,0.460249493211497,0.80823028409406,0.355009592516614,0.705264687593482,0.67824236924195,0.773043412653187,0,0.860413786167011,0,0.132529768321485,0.116193942869518,0,0,0,0,0,1.38134921352481,1.39310378409594,0,0.473227200159376,0.337169380156203,0.241011029883482,0.661763836394364,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,1.15424147083917,0,0,0,0,6.33775174109154,0.982827216677626,1.18157981336281,0,0.860919069801795,0,0.329250856225877,0,0.100528972411631,0.833296006426766,0,0,0,0.115930404975077,0.587043471179108,0.577465791044295,0.925971025153221,0.951270761172991,0,0.858486162094873,0.246217006087397,0,0,0,1.00789276919316,0,0.358234090811393,0,0,26.111151608485,0.792435906119034,4.56121854189699,3.89123874225796,4.4184851699233,0.507983154337352,0,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0.43596006883328,0.1466765716419,0.646358578788889,0,0,1.06375246633948,0,0,0,0.266422179016099,1.00084595560703,0,0,0.65147236858747,0.710783897485092,1.58390374586686,0.904318131178758,0,0.599837947092342,0,0,0,0.239624855491583,0,1.42636905040718,1.59259437334337,1.2328579353023,1.79060963239896,0,0.197030760201927,0,0,0.76228387266739,0,0.773288812777695,0,0,0,0,0,1.10422342547226,0,0.271265023699736,0.623912584592421,1.24900292158013,1.10391690523754,0.468565659970853,0.601892199455438,0,0,0,0.553107505625109,0.521301686808497,0,0,0,0,0.213455115606889,0,1.66435439510497,0.30239029332968,1.24053903909388,1.2276957863045,0,1.02511319404561,0,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0.410635780069046,1.55776328755086,0.116210378459959,0.362578348774867,1.00253235151642,0,0.34444334449382,0.364182336013434,0.524497659837696,0,0,0,0,0.316654886678627,2.27466768141793,0,0.863663664408557,0,0,0,0.764628819135115,0,0,1.315559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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23365 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14193 | |||
|TSSclassifier=S | |||
|UniProt=B4E2K6,Q9NZN5 | |||
|association_with_transcript=-306bp_to_NM_001198665,NM_015313_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_ARHGEF12_5end | |||
|id=chr11:120207300..120207311,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.37e-07,4;CL:0000097,5.50e-07,5;CL:0002028,5.50e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.68e-09;15!UBERON:0000179;5.68e-09;15!UBERON:0000463;5.68e-09;15!UBERON:0001044;2.87e-07;6!UBERON:0003293;2.87e-07;6!UBERON:0003294;2.87e-07;6!UBERON:0010047;2.87e-07;6!UBERON:0003408;2.87e-07;6!UBERON:0000167;2.87e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-09,114;UBERON:0000178,3.83e-09,15;UBERON:0000179,3.83e-09,15;UBERON:0000463,3.83e-09,15;UBERON:0001044,1.93e-07,6;UBERON:0003293,1.93e-07,6;UBERON:0003294,1.93e-07,6;UBERON:0010047,1.93e-07,6;UBERON:0000167,1.93e-07,6 | |||
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| |||
|short_description=p6@ARHGEF12 | |||
}} |
Revision as of 16:12, 10 September 2013
Short description: | p6@ARHGEF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARHGEF12_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -306bp_to_NM_001198665, NM_015313_5end |
EntrezGene: | ARHGEF12 |
HGNC: | 14193 |
UniProt: | B4E2K6Q9NZN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.37e-07 | 4 |
mast cell | 5.50e-07 | 5 |
basophil mast progenitor cell | 5.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-09 | 114 |
blood | 3.83e-09 | 15 |
haemolymphatic fluid | 3.83e-09 | 15 |
organism substance | 3.83e-09 | 15 |
saliva-secreting gland | 1.93e-07 | 6 |
gland of oral region | 1.93e-07 | 6 |
gland of foregut | 1.93e-07 | 6 |
oral gland | 1.93e-07 | 6 |
oral cavity | 1.93e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.