FFCP PHASE1:Hg19::chr11:13073062..13073067,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1136|description=CAGE_peak_at_chr11:13073062..13073067,+|id=chr11:13073062..13073067,+|ontology_enrichment_celltype=CL:0002159!4.47e-16!13;CL:0002251!1.51e-15!21;CL:0002621!6.87e-15!3;CL:0002166!9.02e-15!3;CL:0000622!1.26e-14!5;CL:0002076!2.08e-14!43;CL:0000154!3.34e-12!6;CL:0000223!2.22e-11!59;CL:0000317!7.07e-10!2;CL:1000448!7.07e-10!2;CL:0002308!7.07e-10!2;CL:0002140!7.07e-10!2;CL:0001014!7.73e-10!2;CL:0001016!7.73e-10!2;CL:0000362!6.73e-09!8;CL:0000066!1.94e-08!254;CL:0002537!2.14e-08!5;CL:0000150!3.79e-08!9;CL:0002623!5.33e-07!3;CL:0000240!7.12e-07!6;CL:0000311!7.12e-07!6;CL:0000079!7.12e-07!6;CL:0000237!7.12e-07!6;CL:0000036!7.12e-07!6;CL:0000357!7.12e-07!6;CL:0000114!7.12e-07!6|ontology_enrichment_celltype_v019=CL:0002621;8.02e-44;3!CL:0002166;1.66e-43;3!CL:0002159;1.33e-16;14!CL:0002251;7.21e-12;20!CL:0001014;1.86e-08;2!CL:0001016;1.86e-08;2!CL:0002076;8.27e-08;42|ontology_enrichment_celltype_v019_2=CL:0002621,6.94e-44,3;CL:0002166,1.66e-43,3;CL:0002159,1.30e-16,14;CL:0002251,7.22e-12,20;CL:0002076,1.56e-08,42;CL:0001014,1.86e-08,2;CL:0001016,1.86e-08,2;CL:0002077,5.45e-07,34|ontology_enrichment_development_v019=UBERON:0008814;2.57e-08;2!UBERON:0010056;2.57e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;2.56e-15;1!DOID:3149;2.56e-15;1!DOID:3451;2.57e-08;2!DOID:4159;2.57e-08;2!DOID:0060122;2.57e-08;2|ontology_enrichment_disease_v019_2=DOID:3151,3.66e-15,1;DOID:3149,3.66e-15,1;DOID:3451,3.08e-08,2;DOID:4159,3.08e-08,2;DOID:0060122,3.08e-08,2|ontology_enrichment_uberon=UBERON:0000166!1.94e-19!21;UBERON:0000165!5.71e-17!28;UBERON:0000930!5.71e-17!28;UBERON:0000161!1.17e-15!35;UBERON:0001949!6.87e-15!3;UBERON:0003102!3.84e-12!95;UBERON:0000344!7.69e-12!12;UBERON:0001708!3.45e-11!4;UBERON:0001704!3.45e-11!4;UBERON:0004119!5.97e-10!169;UBERON:0000925!5.97e-10!169;UBERON:0006595!5.97e-10!169;UBERON:0002419!7.07e-10!2;UBERON:0007771!7.07e-10!2;UBERON:0003297!7.07e-10!2;UBERON:0001821!7.07e-10!2;UBERON:0003487!7.07e-10!2;UBERON:0001820!7.07e-10!2;UBERON:0005089!7.07e-10!2;UBERON:0005088!7.07e-10!2;UBERON:0001444!5.81e-09!48;UBERON:0001004!7.67e-09!72;UBERON:0003729!4.32e-08!5;UBERON:0002090!1.39e-07!6;UBERON:0001003!1.41e-07!14;UBERON:0007376!1.41e-07!14;UBERON:0007383!1.41e-07!14;UBERON:0005631!1.65e-07!14;UBERON:0000158!1.65e-07!14;UBERON:0001723!4.60e-07!3;UBERON:0001033!4.60e-07!3;UBERON:0010056!4.60e-07!3;UBERON:0004923!9.18e-07!57|ontology_enrichment_uberon_v019=UBERON:0001949;8.02e-44;3!UBERON:0001708;7.68e-33;4!UBERON:0008895;7.68e-33;4!UBERON:0011159;1.98e-26;5!UBERON:0001723;1.39e-19;3!UBERON:0001033;1.39e-19;3!UBERON:0003929;3.21e-19;7!UBERON:0000165;4.15e-18;28!UBERON:0003350;6.66e-17;8!UBERON:0001828;6.66e-17;8!UBERON:0005795;2.56e-15;1!UBERON:0000161;1.77e-12;19!UBERON:0000166;1.77e-12;19!UBERON:0011137;2.21e-12;11!UBERON:0010323;2.21e-12;11!UBERON:0000486;1.78e-11;12!UBERON:0003729;1.23e-10;13!UBERON:0000075;1.09e-08;16!UBERON:0010371;6.24e-08;31!UBERON:0000344;4.25e-07;20!UBERON:0001555;8.48e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.94e-44,3;UBERON:0001708,7.69e-33,4;UBERON:0008895,7.69e-33,4;UBERON:0011159,1.98e-26,5;UBERON:0000166,3.99e-23,22;UBERON:0010188,3.78e-22,6;UBERON:0002539,3.78e-22,6;UBERON:0008816,3.78e-22,6;UBERON:0000033,7.93e-20,56;UBERON:0008814,9.40e-20,18;UBERON:0001723,1.15e-19,3;UBERON:0001033,1.15e-19,3;UBERON:0010056,1.15e-19,3;UBERON:0000153,7.88e-18,62;UBERON:0007811,7.88e-18,62;UBERON:0000165,1.68e-17,29;UBERON:0000930,1.68e-17,29;UBERON:0003350,6.31e-17,8;UBERON:0001828,6.31e-17,8;UBERON:0003102,2.90e-16,99;UBERON:0000161,4.67e-14,36;UBERON:0010323,2.21e-12,11;UBERON:0003729,1.19e-10,13;UBERON:0001444,2.95e-10,49;UBERON:0011137,7.48e-10,14;UBERON:0001004,6.16e-09,74;UBERON:0000075,1.09e-08,16;UBERON:0000344,4.16e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.436086070818,8.45512973831587,2.58124135850103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,3.69560682037491,2.26840155587818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1136 | |||
|description=CAGE_peak_at_chr11:13073062..13073067,+ | |||
|id=chr11:13073062..13073067,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.47e-16!13;CL:0002251!1.51e-15!21;CL:0002621!6.87e-15!3;CL:0002166!9.02e-15!3;CL:0000622!1.26e-14!5;CL:0002076!2.08e-14!43;CL:0000154!3.34e-12!6;CL:0000223!2.22e-11!59;CL:0000317!7.07e-10!2;CL:1000448!7.07e-10!2;CL:0002308!7.07e-10!2;CL:0002140!7.07e-10!2;CL:0001014!7.73e-10!2;CL:0001016!7.73e-10!2;CL:0000362!6.73e-09!8;CL:0000066!1.94e-08!254;CL:0002537!2.14e-08!5;CL:0000150!3.79e-08!9;CL:0002623!5.33e-07!3;CL:0000240!7.12e-07!6;CL:0000311!7.12e-07!6;CL:0000079!7.12e-07!6;CL:0000237!7.12e-07!6;CL:0000036!7.12e-07!6;CL:0000357!7.12e-07!6;CL:0000114!7.12e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002621;8.02e-44;3!CL:0002166;1.66e-43;3!CL:0002159;1.33e-16;14!CL:0002251;7.21e-12;20!CL:0001014;1.86e-08;2!CL:0001016;1.86e-08;2!CL:0002076;8.27e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.94e-44,3;CL:0002166,1.66e-43,3;CL:0002159,1.30e-16,14;CL:0002251,7.22e-12,20;CL:0002076,1.56e-08,42;CL:0001014,1.86e-08,2;CL:0001016,1.86e-08,2;CL:0002077,5.45e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.57e-08;2!UBERON:0010056;2.57e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.56e-15;1!DOID:3149;2.56e-15;1!DOID:3451;2.57e-08;2!DOID:4159;2.57e-08;2!DOID:0060122;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.66e-15,1;DOID:3149,3.66e-15,1;DOID:3451,3.08e-08,2;DOID:4159,3.08e-08,2;DOID:0060122,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.94e-19!21;UBERON:0000165!5.71e-17!28;UBERON:0000930!5.71e-17!28;UBERON:0000161!1.17e-15!35;UBERON:0001949!6.87e-15!3;UBERON:0003102!3.84e-12!95;UBERON:0000344!7.69e-12!12;UBERON:0001708!3.45e-11!4;UBERON:0001704!3.45e-11!4;UBERON:0004119!5.97e-10!169;UBERON:0000925!5.97e-10!169;UBERON:0006595!5.97e-10!169;UBERON:0002419!7.07e-10!2;UBERON:0007771!7.07e-10!2;UBERON:0003297!7.07e-10!2;UBERON:0001821!7.07e-10!2;UBERON:0003487!7.07e-10!2;UBERON:0001820!7.07e-10!2;UBERON:0005089!7.07e-10!2;UBERON:0005088!7.07e-10!2;UBERON:0001444!5.81e-09!48;UBERON:0001004!7.67e-09!72;UBERON:0003729!4.32e-08!5;UBERON:0002090!1.39e-07!6;UBERON:0001003!1.41e-07!14;UBERON:0007376!1.41e-07!14;UBERON:0007383!1.41e-07!14;UBERON:0005631!1.65e-07!14;UBERON:0000158!1.65e-07!14;UBERON:0001723!4.60e-07!3;UBERON:0001033!4.60e-07!3;UBERON:0010056!4.60e-07!3;UBERON:0004923!9.18e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.02e-44;3!UBERON:0001708;7.68e-33;4!UBERON:0008895;7.68e-33;4!UBERON:0011159;1.98e-26;5!UBERON:0001723;1.39e-19;3!UBERON:0001033;1.39e-19;3!UBERON:0003929;3.21e-19;7!UBERON:0000165;4.15e-18;28!UBERON:0003350;6.66e-17;8!UBERON:0001828;6.66e-17;8!UBERON:0005795;2.56e-15;1!UBERON:0000161;1.77e-12;19!UBERON:0000166;1.77e-12;19!UBERON:0011137;2.21e-12;11!UBERON:0010323;2.21e-12;11!UBERON:0000486;1.78e-11;12!UBERON:0003729;1.23e-10;13!UBERON:0000075;1.09e-08;16!UBERON:0010371;6.24e-08;31!UBERON:0000344;4.25e-07;20!UBERON:0001555;8.48e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.94e-44,3;UBERON:0001708,7.69e-33,4;UBERON:0008895,7.69e-33,4;UBERON:0011159,1.98e-26,5;UBERON:0000166,3.99e-23,22;UBERON:0010188,3.78e-22,6;UBERON:0002539,3.78e-22,6;UBERON:0008816,3.78e-22,6;UBERON:0000033,7.93e-20,56;UBERON:0008814,9.40e-20,18;UBERON:0001723,1.15e-19,3;UBERON:0001033,1.15e-19,3;UBERON:0010056,1.15e-19,3;UBERON:0000153,7.88e-18,62;UBERON:0007811,7.88e-18,62;UBERON:0000165,1.68e-17,29;UBERON:0000930,1.68e-17,29;UBERON:0003350,6.31e-17,8;UBERON:0001828,6.31e-17,8;UBERON:0003102,2.90e-16,99;UBERON:0000161,4.67e-14,36;UBERON:0010323,2.21e-12,11;UBERON:0003729,1.19e-10,13;UBERON:0001444,2.95e-10,49;UBERON:0011137,7.48e-10,14;UBERON:0001004,6.16e-09,74;UBERON:0000075,1.09e-08,16;UBERON:0000344,4.16e-07,20 | |||
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|short_description=p@chr11:13073062..13073067,+ | |||
}} |
Revision as of 16:41, 10 September 2013
Short description: | p@chr11:13073062..13073067, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:13073062..13073067, + |
Coexpression cluster: | C1136_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_keratoacanthoma_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.94e-44 | 3 |
epithelial cell of Malassez | 1.66e-43 | 3 |
general ecto-epithelial cell | 1.30e-16 | 14 |
epithelial cell of alimentary canal | 7.22e-12 | 20 |
endo-epithelial cell | 1.56e-08 | 42 |
CD1a-positive Langerhans cell | 1.86e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.86e-08 | 2 |
ecto-epithelial cell | 5.45e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.94e-44 | 3 |
jaw skeleton | 7.69e-33 | 4 |
splanchnocranium | 7.69e-33 | 4 |
primary subdivision of cranial skeletal system | 1.98e-26 | 5 |
oral opening | 3.99e-23 | 22 |
protuberance | 3.78e-22 | 6 |
pharyngeal arch | 3.78e-22 | 6 |
embryonic head | 3.78e-22 | 6 |
head | 7.93e-20 | 56 |
pharyngeal arch system | 9.40e-20 | 18 |
tongue | 1.15e-19 | 3 |
gustatory system | 1.15e-19 | 3 |
future tongue | 1.15e-19 | 3 |
anterior region of body | 7.88e-18 | 62 |
craniocervical region | 7.88e-18 | 62 |
mouth | 1.68e-17 | 29 |
stomodeum | 1.68e-17 | 29 |
epithelium of mucosa | 6.31e-17 | 8 |
gingiva | 6.31e-17 | 8 |
surface structure | 2.90e-16 | 99 |
orifice | 4.67e-14 | 36 |
cranial skeletal system | 2.21e-12 | 11 |
mouth mucosa | 1.19e-10 | 13 |
subdivision of head | 2.95e-10 | 49 |
axial skeletal system | 7.48e-10 | 14 |
respiratory system | 6.16e-09 | 74 |
subdivision of skeletal system | 1.09e-08 | 16 |
mucosa | 4.16e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.66e-15 | 1 |
keratoacanthoma | 3.66e-15 | 1 |
skin carcinoma | 3.08e-08 | 2 |
skin cancer | 3.08e-08 | 2 |
integumentary system cancer | 3.08e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.