FFCP PHASE1:Hg19::chr11:131123319..131123338,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=2bp_to_ENST00000416553_5end|coexpression_cluster_id=C130|description=CAGE_peak_1_at_ENST00000416553_5end|id=chr11:131123319..131123338,+|ontology_enrichment_celltype=CL:0002322!2.00e-50!5;CL:0000039!7.91e-23!7;CL:0000586!7.91e-23!7;CL:0000047!8.90e-21!8;CL:0000540!3.69e-16!6;CL:0000031!3.69e-16!6;CL:0000404!3.69e-16!6;CL:0000148!1.01e-09!10;CL:0000541!1.01e-09!10;CL:0000133!1.68e-07!59;CL:0000147!4.43e-07!14|ontology_enrichment_celltype_v019=CL:0002322;1.16e-70;5!CL:0002321;1.06e-23;15!CL:0000540;1.97e-22;6!CL:0000404;1.97e-22;6!CL:0000039;1.48e-18;7!CL:0000586;1.48e-18;7!CL:0000148;1.94e-13;10!CL:0000147;9.10e-10;14!CL:0002319;8.15e-09;25!CL:0000047;2.77e-08;2!CL:0000710;5.39e-07;20|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-70,5;CL:0000047,4.75e-29,8;CL:0000540,1.97e-22,6;CL:0000031,1.97e-22,6;CL:0000404,1.97e-22,6;CL:0000039,1.67e-18,7;CL:0000586,1.67e-18,7;CL:0000148,1.90e-13,10;CL:0000541,1.90e-13,10;CL:0000133,5.05e-11,59;CL:0000147,8.96e-10,14;CL:0000221,5.42e-09,72;CL:0002319,7.91e-09,25;CL:0000710,5.34e-07,20|ontology_enrichment_development_v019=CL:0000031;1.97e-22;6!UBERON:0009117;3.44e-13;10!UBERON:0005564;3.44e-13;10!CL:0000133;3.73e-07;59|ontology_enrichment_disease=DOID:3095!3.63e-11!22;DOID:2994!3.63e-11!22;DOID:3112!4.91e-11!1|ontology_enrichment_disease_v019=DOID:3095;1.91e-10;22!DOID:2994;1.91e-10;22|ontology_enrichment_disease_v019_2=DOID:3095,1.98e-10,22;DOID:2994,1.98e-10,22|ontology_enrichment_uberon=UBERON:0000473!5.13e-20!8;UBERON:0003135!1.23e-14!11;UBERON:0000991!9.20e-08!21;UBERON:0009196!9.20e-08!21;UBERON:0009117!9.20e-08!21;UBERON:0005564!9.20e-08!21;UBERON:0004176!2.04e-07!22;UBERON:0003101!2.04e-07!22;UBERON:0000079!2.04e-07!22|ontology_enrichment_uberon_v019=UBERON:0000473;2.52e-16;8!UBERON:0003135;4.77e-12;11!UBERON:0000922;2.21e-10;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.81e-16,8;UBERON:0003135,5.15e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56236978003491,6.09636934278832,6.27447291495399,3.42081481550722,10.849796587652,13.8691396448815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4323022526418,21.8687704189602,27.4190623099262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,1.09265571963696,0,1.01988829741982,2.40495664739004,0.459474497674225,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000416553}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000416553_5end | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_1_at_ENST00000416553_5end | |||
|id=chr11:131123319..131123338,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.00e-50!5;CL:0000039!7.91e-23!7;CL:0000586!7.91e-23!7;CL:0000047!8.90e-21!8;CL:0000540!3.69e-16!6;CL:0000031!3.69e-16!6;CL:0000404!3.69e-16!6;CL:0000148!1.01e-09!10;CL:0000541!1.01e-09!10;CL:0000133!1.68e-07!59;CL:0000147!4.43e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.16e-70;5!CL:0002321;1.06e-23;15!CL:0000540;1.97e-22;6!CL:0000404;1.97e-22;6!CL:0000039;1.48e-18;7!CL:0000586;1.48e-18;7!CL:0000148;1.94e-13;10!CL:0000147;9.10e-10;14!CL:0002319;8.15e-09;25!CL:0000047;2.77e-08;2!CL:0000710;5.39e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-70,5;CL:0000047,4.75e-29,8;CL:0000540,1.97e-22,6;CL:0000031,1.97e-22,6;CL:0000404,1.97e-22,6;CL:0000039,1.67e-18,7;CL:0000586,1.67e-18,7;CL:0000148,1.90e-13,10;CL:0000541,1.90e-13,10;CL:0000133,5.05e-11,59;CL:0000147,8.96e-10,14;CL:0000221,5.42e-09,72;CL:0002319,7.91e-09,25;CL:0000710,5.34e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;1.97e-22;6!UBERON:0009117;3.44e-13;10!UBERON:0005564;3.44e-13;10!CL:0000133;3.73e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!3.63e-11!22;DOID:2994!3.63e-11!22;DOID:3112!4.91e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.91e-10;22!DOID:2994;1.91e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.98e-10,22;DOID:2994,1.98e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.13e-20!8;UBERON:0003135!1.23e-14!11;UBERON:0000991!9.20e-08!21;UBERON:0009196!9.20e-08!21;UBERON:0009117!9.20e-08!21;UBERON:0005564!9.20e-08!21;UBERON:0004176!2.04e-07!22;UBERON:0003101!2.04e-07!22;UBERON:0000079!2.04e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.52e-16;8!UBERON:0003135;4.77e-12;11!UBERON:0000922;2.21e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.81e-16,8;UBERON:0003135,5.15e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56236978003491,6.09636934278832,6.27447291495399,3.42081481550722,10.849796587652,13.8691396448815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4323022526418,21.8687704189602,27.4190623099262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,1.09265571963696,0,1.01988829741982,2.40495664739004,0.459474497674225,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000416553 | |||
}} |
Revision as of 16:41, 10 September 2013
Short description: | p1@ENST00000416553 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000416553_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 2bp_to_ENST00000416553_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-70 | 5 |
neuronal stem cell | 4.75e-29 | 8 |
neuron | 1.97e-22 | 6 |
neuroblast | 1.97e-22 | 6 |
electrically signaling cell | 1.97e-22 | 6 |
germ line cell | 1.67e-18 | 7 |
germ cell | 1.67e-18 | 7 |
melanocyte | 1.90e-13 | 10 |
melanoblast | 1.90e-13 | 10 |
neurectodermal cell | 5.05e-11 | 59 |
pigment cell | 8.96e-10 | 14 |
ectodermal cell | 5.42e-09 | 72 |
neural cell | 7.91e-09 | 25 |
neurecto-epithelial cell | 5.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 2.81e-16 | 8 |
male reproductive organ | 5.15e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.98e-10 | 22 |
germ cell cancer | 1.98e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.