FFCP PHASE1:Hg19::chr11:2152665..2152693,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5466|TSSclassifier=N|UniProt=|association_with_transcript=-470bp_to_AK074614_5end|coexpression_cluster_id=C172|description=CAGE_peak_27_at_IGF2_5end|id=chr11:2152665..2152693,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;9.28e-19;19!CL:0002537;3.19e-08;5|ontology_enrichment_celltype_v019_2=CL:0000349,7.49e-19,19;CL:0002537,3.44e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!9.65e-14!14;UBERON:0000158!9.65e-14!14;UBERON:0000478!1.35e-11!24;UBERON:0000468!6.16e-10!659;UBERON:0000481!3.28e-09!347;UBERON:0000922!1.54e-08!612;UBERON:0004923!2.06e-08!57;UBERON:0004119!5.35e-08!169;UBERON:0000925!5.35e-08!169;UBERON:0006595!5.35e-08!169;UBERON:0003124!7.84e-08!7;UBERON:0000305!1.59e-07!7;UBERON:0002100!3.52e-07!216;UBERON:0002050!3.82e-07!605;UBERON:0005423!3.82e-07!605;UBERON:0000062!5.64e-07!511;UBERON:0000064!6.78e-07!219;UBERON:0000119!7.71e-07!312;UBERON:0000923!8.03e-07!604;UBERON:0005291!8.03e-07!604;UBERON:0006598!8.03e-07!604;UBERON:0002532!8.03e-07!604|ontology_enrichment_uberon_v019=UBERON:0000478;3.90e-18;24!UBERON:0005631;1.29e-15;10!UBERON:0000158;1.29e-15;10!UBERON:0000305;2.59e-11;7!UBERON:0000922;3.06e-09;49!UBERON:0005409;3.98e-08;22!UBERON:0000160;1.27e-07;17!UBERON:0001987;2.15e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.14e-21,14;UBERON:0000158,2.14e-21,14;UBERON:0000478,3.20e-18,24;UBERON:0003124,8.95e-12,7;UBERON:0000305,2.81e-11,7;UBERON:0004871,1.12e-09,8;UBERON:0000160,1.16e-07,17;UBERON:0001987,2.06e-07,4;UBERON:0004340,2.06e-07,4;UBERON:0004923,3.36e-07,66;UBERON:0005409,7.45e-07,25|phase1_expression=0.726713517082227,0.856402095563933,0,4.00293193412522,1.78784437770915,8.72338524100369,0,0,0,0.737201809504527,1.39560233594486,35.1690609129577,34.0259401914705,0.247532705920093,2.31978163009541,0,0,0,0,0.738726348460727,5.91602004608334,3.13454721478088,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,1.73815822752988,0,0,0.0945348171640679,0.443458794925128,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0,0,2.72443369760877,6.33793516927999,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.491337269247072,0,1.18800285728205,6.67620709052104,0,0,0.168336113954066,0.125118519871964,0,1.31693286264251,0,0.751190294532984,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0.339121184620975,0,0,0,0,0,3.36962434321603,1.7622379352613,1.51392510525377,0,0,0,0,10.6804623447355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,1.96565443335525,14.7697476670351,0,12.2988438543114,0,0.109750285408626,0,0,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,1.59562869950922,2.08014873822732,0.771622122786426,2.83698264046557,0.799266537048298,2.7165818795048,39.0687555881839,1.64648067356154,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0,0,0,1.30303176000821,3.49309748335652,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,3.31267027641678,6.5022167737758,3.52644530809656,4.36738809214695,4.10386674233472,2.68094105557689,3.74852527976682,0,0,2.0694614258501,0,0.184369168541703,0.0868836144680828,24.0835423679171,108.776465348041,0,0,0,4.85004114314015,23.3009615314696,41.4274701861662,0,0.460385919864187,0.841980283299221,0,2.55853624533352,1.76939313257968,2.96836132889982,0,0,0,1.03850885836724,0,19.2166524850679,1.80455823272956,0.184161977871793,0.459257792658427,1.45672934405374,2.09799063935079,0,0.693138033939733,0,0,0.105551628892876,0,0,2.37507507712353,3.08454505380579,0.270946437543853,2.50844886927427,0,0,0,0,0,0,0.328014645699706,0,1.54561517471583,0,0.082509499920588,0,0,0,0.580024309752732,0.154048617114644,0.767518373630648,1.92971201478343,0,1.30515024522806,0.596586391912706,12.197388883603,0.826424576804891,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,1.90630193923825,0,1.28381696410176,0,0,2.33834194858309,1.64722217841633,0.471249609382746,0,0,0,1.95053495635836,0,0,3.13949796238367,0.424216295861138,0,0,0,0,0,0,0,0,0,0.573645408816206,1.8667317792493,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,2.63602642174982,0.86101074534246,0,4.87773168890343,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8790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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-470bp_to_AK074614_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_27_at_IGF2_5end | |||
|id=chr11:2152665..2152693,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.28e-19;19!CL:0002537;3.19e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.49e-19,19;CL:0002537,3.44e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.65e-14!14;UBERON:0000158!9.65e-14!14;UBERON:0000478!1.35e-11!24;UBERON:0000468!6.16e-10!659;UBERON:0000481!3.28e-09!347;UBERON:0000922!1.54e-08!612;UBERON:0004923!2.06e-08!57;UBERON:0004119!5.35e-08!169;UBERON:0000925!5.35e-08!169;UBERON:0006595!5.35e-08!169;UBERON:0003124!7.84e-08!7;UBERON:0000305!1.59e-07!7;UBERON:0002100!3.52e-07!216;UBERON:0002050!3.82e-07!605;UBERON:0005423!3.82e-07!605;UBERON:0000062!5.64e-07!511;UBERON:0000064!6.78e-07!219;UBERON:0000119!7.71e-07!312;UBERON:0000923!8.03e-07!604;UBERON:0005291!8.03e-07!604;UBERON:0006598!8.03e-07!604;UBERON:0002532!8.03e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.90e-18;24!UBERON:0005631;1.29e-15;10!UBERON:0000158;1.29e-15;10!UBERON:0000305;2.59e-11;7!UBERON:0000922;3.06e-09;49!UBERON:0005409;3.98e-08;22!UBERON:0000160;1.27e-07;17!UBERON:0001987;2.15e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.14e-21,14;UBERON:0000158,2.14e-21,14;UBERON:0000478,3.20e-18,24;UBERON:0003124,8.95e-12,7;UBERON:0000305,2.81e-11,7;UBERON:0004871,1.12e-09,8;UBERON:0000160,1.16e-07,17;UBERON:0001987,2.06e-07,4;UBERON:0004340,2.06e-07,4;UBERON:0004923,3.36e-07,66;UBERON:0005409,7.45e-07,25 | |||
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| |||
|short_description=p27@IGF2 | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p27@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -470bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.49e-19 | 19 |
amnion mesenchymal stem cell | 3.44e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.14e-21 | 14 |
membranous layer | 2.14e-21 | 14 |
extraembryonic structure | 3.20e-18 | 24 |
chorion | 8.95e-12 | 7 |
amnion | 2.81e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.12e-09 | 8 |
intestine | 1.16e-07 | 17 |
placenta | 2.06e-07 | 4 |
allantois | 2.06e-07 | 4 |
organ component layer | 3.36e-07 | 66 |
gastrointestinal system | 7.45e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.