FFCP PHASE1:Hg19::chr11:2152902..2152970,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5466|TSSclassifier=W|UniProt=|association_with_transcript=-193bp_to_AK074614_5end|coexpression_cluster_id=C172|description=CAGE_peak_13_at_IGF2_5end|id=chr11:2152902..2152970,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.06e-11;19|ontology_enrichment_celltype_v019_2=CL:0000349,1.19e-11,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.84e-15!115;UBERON:0000481!9.64e-15!347;UBERON:0000468!1.60e-12!659;UBERON:0000119!6.79e-12!312;UBERON:0000483!1.84e-11!309;UBERON:0005631!9.53e-11!14;UBERON:0000158!9.53e-11!14;UBERON:0000475!1.00e-10!365;UBERON:0000922!6.87e-10!612;UBERON:0000064!2.02e-09!219;UBERON:0002616!3.97e-09!59;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0000477!1.28e-08!286;UBERON:0001049!1.56e-08!57;UBERON:0005068!1.56e-08!57;UBERON:0006241!1.56e-08!57;UBERON:0007135!1.56e-08!57;UBERON:0000478!2.03e-08!24;UBERON:0000062!2.18e-08!511;UBERON:0002346!2.72e-08!90;UBERON:0002050!3.94e-08!605;UBERON:0005423!3.94e-08!605;UBERON:0000923!8.17e-08!604;UBERON:0005291!8.17e-08!604;UBERON:0006598!8.17e-08!604;UBERON:0002532!8.17e-08!604;UBERON:0004119!1.04e-07!169;UBERON:0000925!1.04e-07!169;UBERON:0006595!1.04e-07!169;UBERON:0000955!1.33e-07!69;UBERON:0006238!1.33e-07!69;UBERON:0004121!1.51e-07!169;UBERON:0000467!1.94e-07!625;UBERON:0001017!2.15e-07!82;UBERON:0000480!2.63e-07!626;UBERON:0005743!3.08e-07!86;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0000924!4.39e-07!173;UBERON:0006601!4.39e-07!173;UBERON:0005256!4.62e-07!143;UBERON:0002100!7.60e-07!216;UBERON:0000033!7.66e-07!123|ontology_enrichment_uberon_v019=UBERON:0000478;6.39e-11;24!UBERON:0005631;4.39e-10;10!UBERON:0000158;4.39e-10;10!UBERON:0000305;3.20e-07;7!UBERON:0002107;4.00e-07;19!UBERON:0006925;4.00e-07;19!UBERON:0000922;5.41e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-13,14;UBERON:0000158,1.58e-13,14;UBERON:0000478,7.11e-11,24;UBERON:0003104,1.00e-10,160;UBERON:0009142,1.00e-10,160;UBERON:0005256,3.93e-08,122;UBERON:0003124,5.20e-08,7;UBERON:0000119,1.37e-07,309;UBERON:0000483,1.54e-07,306;UBERON:0006554,2.45e-07,47;UBERON:0002107,3.50e-07,19;UBERON:0006925,3.50e-07,19;UBERON:0008836,3.50e-07,19;UBERON:0000305,3.82e-07,7;UBERON:0001008,5.10e-07,48;UBERON:0004119,5.57e-07,160;UBERON:0000925,5.57e-07,160;UBERON:0006595,5.57e-07,160|phase1_expression=2.36181893051724,5.56661362116556,0.281908808191942,9.00659685178174,4.46961094427288,31.4041868676133,0,0,0,2.21160542851358,2.09340350391728,145.263512466565,212.332417473905,2.72285976512103,12.2617029019329,0,0,0,0,0.984968464614303,17.1360580645173,11.2843699732112,0,0,0.627713197974014,0,0,0,0,0,2.94150634300544,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,9.27017721349272,0,0.973269740605272,0.472674085820339,1.77383517970051,2.63504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,1.37559020970034,0,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0,0,1.62028389576352,0,0.44905874525234,0.112611480483322,0,0,2.19842092716489,0,0,0,0.496971951695318,0,0,0,0,1.12135520028461,1.06748995729705,0.49333509683432,0.311211035399766,0.942974704487816,0,12.2599516392394,21.31850920576,0.937285727335186,0,0,0.149448680551801,0,0,0,0,1.35117749042945,0.206651562351531,7.12801714369232,16.5668842616633,0,1.43723628363248,0.336672227908132,0.875829639103749,0,2.19488810440419,0.612975591598039,0.45071417671979,0.567160915800105,0.179389635688862,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,3.07127507955743,0,0,0.508681776931463,0,0,0,0.365921118388786,0.265059536642971,12.4327518870385,7.87824018116815,5.04641701751257,0,0,0,0,40.8643776668142,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,2.4694440679884,8.82052268313252,32.956309053676,6.87979051674338,44.3092430011053,0,73.4240978102388,0.171567810298526,0,0,0,2.12953423864618,0.977424915930974,0,4.3299402607582,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0,0.336393253036082,9.15516144549888,0.1466765716419,0,0,0,5.85063856486715,1.04007436911366,2.05765899409714,8.5109479213967,5.59486575933809,18.3011831882429,152.476671114995,20.5810084195192,0,4.6200953336531,5.543663110534,0,0,0,0,0,0,0,0,0,3.76431397335706,10.4792924500696,1.25342674267927,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,15.2137449731733,58.0197804429225,13.0207211375873,24.748532522166,16.7723249469332,18.2934801439364,15.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-193bp_to_AK074614_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_13_at_IGF2_5end | |||
|id=chr11:2152902..2152970,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.06e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.19e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.84e-15!115;UBERON:0000481!9.64e-15!347;UBERON:0000468!1.60e-12!659;UBERON:0000119!6.79e-12!312;UBERON:0000483!1.84e-11!309;UBERON:0005631!9.53e-11!14;UBERON:0000158!9.53e-11!14;UBERON:0000475!1.00e-10!365;UBERON:0000922!6.87e-10!612;UBERON:0000064!2.02e-09!219;UBERON:0002616!3.97e-09!59;UBERON:0003075!4.16e-09!86;UBERON:0007284!4.16e-09!86;UBERON:0000477!1.28e-08!286;UBERON:0001049!1.56e-08!57;UBERON:0005068!1.56e-08!57;UBERON:0006241!1.56e-08!57;UBERON:0007135!1.56e-08!57;UBERON:0000478!2.03e-08!24;UBERON:0000062!2.18e-08!511;UBERON:0002346!2.72e-08!90;UBERON:0002050!3.94e-08!605;UBERON:0005423!3.94e-08!605;UBERON:0000923!8.17e-08!604;UBERON:0005291!8.17e-08!604;UBERON:0006598!8.17e-08!604;UBERON:0002532!8.17e-08!604;UBERON:0004119!1.04e-07!169;UBERON:0000925!1.04e-07!169;UBERON:0006595!1.04e-07!169;UBERON:0000955!1.33e-07!69;UBERON:0006238!1.33e-07!69;UBERON:0004121!1.51e-07!169;UBERON:0000467!1.94e-07!625;UBERON:0001017!2.15e-07!82;UBERON:0000480!2.63e-07!626;UBERON:0005743!3.08e-07!86;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0000924!4.39e-07!173;UBERON:0006601!4.39e-07!173;UBERON:0005256!4.62e-07!143;UBERON:0002100!7.60e-07!216;UBERON:0000033!7.66e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.39e-11;24!UBERON:0005631;4.39e-10;10!UBERON:0000158;4.39e-10;10!UBERON:0000305;3.20e-07;7!UBERON:0002107;4.00e-07;19!UBERON:0006925;4.00e-07;19!UBERON:0000922;5.41e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-13,14;UBERON:0000158,1.58e-13,14;UBERON:0000478,7.11e-11,24;UBERON:0003104,1.00e-10,160;UBERON:0009142,1.00e-10,160;UBERON:0005256,3.93e-08,122;UBERON:0003124,5.20e-08,7;UBERON:0000119,1.37e-07,309;UBERON:0000483,1.54e-07,306;UBERON:0006554,2.45e-07,47;UBERON:0002107,3.50e-07,19;UBERON:0006925,3.50e-07,19;UBERON:0008836,3.50e-07,19;UBERON:0000305,3.82e-07,7;UBERON:0001008,5.10e-07,48;UBERON:0004119,5.57e-07,160;UBERON:0000925,5.57e-07,160;UBERON:0006595,5.57e-07,160 | |||
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| |||
|short_description=p13@IGF2 | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p13@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -193bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.19e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.58e-13 | 14 |
membranous layer | 1.58e-13 | 14 |
extraembryonic structure | 7.11e-11 | 24 |
mesenchyme | 1.00e-10 | 160 |
entire embryonic mesenchyme | 1.00e-10 | 160 |
trunk mesenchyme | 3.93e-08 | 122 |
chorion | 5.20e-08 | 7 |
cell layer | 1.37e-07 | 309 |
epithelium | 1.54e-07 | 306 |
urinary system structure | 2.45e-07 | 47 |
liver | 3.50e-07 | 19 |
digestive gland | 3.50e-07 | 19 |
liver bud | 3.50e-07 | 19 |
amnion | 3.82e-07 | 7 |
renal system | 5.10e-07 | 48 |
endoderm-derived structure | 5.57e-07 | 160 |
endoderm | 5.57e-07 | 160 |
presumptive endoderm | 5.57e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.