FFCP PHASE1:Hg19::chr11:2154203..2154221,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_CU674261_5end|coexpression_cluster_id=C172|description=CAGE_peak_2_at_CU674261_5end|id=chr11:2154203..2154221,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.12e-23;19!CL:0002577;9.25e-10;3!CL:0002541;1.75e-09;3!CL:0002564;9.92e-09;3!CL:0000182;1.10e-07;12!CL:0002575;3.95e-07;2!CL:0002536;6.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,9.19e-24,19;CL:0002577,9.15e-10,3;CL:0002541,1.12e-09,3;CL:0002564,9.19e-09,3;CL:0000182,1.09e-07,12;CL:0002575,3.84e-07,2;CL:0002536,6.28e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!5.47e-15!14;UBERON:0000158!5.47e-15!14;UBERON:0000478!1.85e-12!24;UBERON:0003124!8.20e-10!7;UBERON:0002107!1.37e-09!19;UBERON:0006925!1.37e-09!19;UBERON:0008836!1.37e-09!19;UBERON:0004119!6.00e-09!169;UBERON:0000925!6.00e-09!169;UBERON:0006595!6.00e-09!169;UBERON:0005256!2.14e-08!143;UBERON:0008835!1.07e-07!22;UBERON:0003894!1.07e-07!22;UBERON:0005057!1.42e-07!26;UBERON:0002100!2.85e-07!216;UBERON:0007499!3.48e-07!25;UBERON:0009854!3.50e-07!23;UBERON:0000481!3.61e-07!347;UBERON:0003929!5.93e-07!54;UBERON:0000305!6.04e-07!7;UBERON:0004923!6.34e-07!57;UBERON:0009856!9.60e-07!26|ontology_enrichment_uberon_v019=UBERON:0000478;2.12e-24;24!UBERON:0005631;4.30e-18;10!UBERON:0000158;4.30e-18;10!UBERON:0001987;2.34e-12;4!UBERON:0000305;9.19e-11;7!UBERON:0002107;4.61e-10;19!UBERON:0006925;4.61e-10;19!UBERON:0003124;1.75e-09;3!UBERON:0000920;1.75e-09;3!UBERON:0002242;9.92e-09;3!UBERON:0011135;1.05e-08;5!UBERON:0002216;1.05e-08;5!UBERON:0011134;1.05e-08;5!UBERON:0002209;1.05e-08;5!UBERON:0002213;1.05e-08;5!UBERON:0007844;1.05e-08;5!UBERON:0011138;1.05e-08;5!UBERON:0001130;1.05e-08;5!UBERON:0001066;1.05e-08;5!UBERON:0001468;1.05e-08;5!UBERON:0002423;3.11e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-28,14;UBERON:0000158,1.43e-28,14;UBERON:0000478,1.81e-24,24;UBERON:0003124,2.62e-20,7;UBERON:0001987,2.39e-12,4;UBERON:0004340,2.39e-12,4;UBERON:0000305,9.42e-11,7;UBERON:0002107,4.34e-10,19;UBERON:0006925,4.34e-10,19;UBERON:0008836,4.34e-10,19;UBERON:0000920,1.12e-09,3;UBERON:0004871,2.40e-09,8;UBERON:0011135,7.90e-09,5;UBERON:0002216,7.90e-09,5;UBERON:0011134,7.90e-09,5;UBERON:0002209,7.90e-09,5;UBERON:0002213,7.90e-09,5;UBERON:0005856,7.90e-09,5;UBERON:0005866,7.90e-09,5;UBERON:0005863,7.90e-09,5;UBERON:0007844,7.90e-09,5;UBERON:0011138,7.90e-09,5;UBERON:0001130,7.90e-09,5;UBERON:0001066,7.90e-09,5;UBERON:0001468,7.90e-09,5;UBERON:0002242,9.19e-09,3;UBERON:0003068,9.19e-09,3;UBERON:0002328,9.19e-09,3;UBERON:0004880,9.19e-09,3;UBERON:0008835,1.79e-08,22;UBERON:0003894,1.79e-08,22;UBERON:0009854,4.96e-08,23;UBERON:0004119,1.99e-07,160;UBERON:0000925,1.99e-07,160;UBERON:0006595,1.99e-07,160;UBERON:0003104,2.60e-07,160;UBERON:0009142,2.60e-07,160;UBERON:0007499,2.98e-07,25;UBERON:0009497,2.98e-07,25;UBERON:0000015,2.98e-07,25;UBERON:0002423,2.98e-07,25;UBERON:0006235,2.98e-07,25;UBERON:0004161,2.98e-07,25;UBERON:0009856,6.56e-07,26|phase1_expression=1.09007027562334,0.428201047781966,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,6.334799791775,6.59417445571134,0.37129905888014,1.65698687863958,0,0,0,0,0.123121058076788,1.22400414746552,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00416183829401,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.605429710579726,3.45705554687999,0,0,0,0,0,0,0,0,0.122834317311768,0,2.37600571456411,0.989067717114227,0,0,0,0,0,0,0.612975591598039,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,3.71494342425583,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,3.80265104465493,0.982827216677626,1.18157981336281,0,1.8448265781467,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,0,0.799266537048298,1.28680194292333,13.0229185293946,0,0,0.710783897485092,2.37585561880029,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,3.50119364741774,2.44138521329762,1.24782516918484,0.713715955188647,0.630809660135739,1.05427273493442,0.300946099727719,0,1.03473071292505,0,0,0,7.83204629850962,20.2454620048405,0,0,0,5.75942385747893,8.32177197552485,17.2362467197918,0,0.46038591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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU674261_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_2_at_CU674261_5end | |||
|id=chr11:2154203..2154221,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.12e-23;19!CL:0002577;9.25e-10;3!CL:0002541;1.75e-09;3!CL:0002564;9.92e-09;3!CL:0000182;1.10e-07;12!CL:0002575;3.95e-07;2!CL:0002536;6.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.19e-24,19;CL:0002577,9.15e-10,3;CL:0002541,1.12e-09,3;CL:0002564,9.19e-09,3;CL:0000182,1.09e-07,12;CL:0002575,3.84e-07,2;CL:0002536,6.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.47e-15!14;UBERON:0000158!5.47e-15!14;UBERON:0000478!1.85e-12!24;UBERON:0003124!8.20e-10!7;UBERON:0002107!1.37e-09!19;UBERON:0006925!1.37e-09!19;UBERON:0008836!1.37e-09!19;UBERON:0004119!6.00e-09!169;UBERON:0000925!6.00e-09!169;UBERON:0006595!6.00e-09!169;UBERON:0005256!2.14e-08!143;UBERON:0008835!1.07e-07!22;UBERON:0003894!1.07e-07!22;UBERON:0005057!1.42e-07!26;UBERON:0002100!2.85e-07!216;UBERON:0007499!3.48e-07!25;UBERON:0009854!3.50e-07!23;UBERON:0000481!3.61e-07!347;UBERON:0003929!5.93e-07!54;UBERON:0000305!6.04e-07!7;UBERON:0004923!6.34e-07!57;UBERON:0009856!9.60e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.12e-24;24!UBERON:0005631;4.30e-18;10!UBERON:0000158;4.30e-18;10!UBERON:0001987;2.34e-12;4!UBERON:0000305;9.19e-11;7!UBERON:0002107;4.61e-10;19!UBERON:0006925;4.61e-10;19!UBERON:0003124;1.75e-09;3!UBERON:0000920;1.75e-09;3!UBERON:0002242;9.92e-09;3!UBERON:0011135;1.05e-08;5!UBERON:0002216;1.05e-08;5!UBERON:0011134;1.05e-08;5!UBERON:0002209;1.05e-08;5!UBERON:0002213;1.05e-08;5!UBERON:0007844;1.05e-08;5!UBERON:0011138;1.05e-08;5!UBERON:0001130;1.05e-08;5!UBERON:0001066;1.05e-08;5!UBERON:0001468;1.05e-08;5!UBERON:0002423;3.11e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-28,14;UBERON:0000158,1.43e-28,14;UBERON:0000478,1.81e-24,24;UBERON:0003124,2.62e-20,7;UBERON:0001987,2.39e-12,4;UBERON:0004340,2.39e-12,4;UBERON:0000305,9.42e-11,7;UBERON:0002107,4.34e-10,19;UBERON:0006925,4.34e-10,19;UBERON:0008836,4.34e-10,19;UBERON:0000920,1.12e-09,3;UBERON:0004871,2.40e-09,8;UBERON:0011135,7.90e-09,5;UBERON:0002216,7.90e-09,5;UBERON:0011134,7.90e-09,5;UBERON:0002209,7.90e-09,5;UBERON:0002213,7.90e-09,5;UBERON:0005856,7.90e-09,5;UBERON:0005866,7.90e-09,5;UBERON:0005863,7.90e-09,5;UBERON:0007844,7.90e-09,5;UBERON:0011138,7.90e-09,5;UBERON:0001130,7.90e-09,5;UBERON:0001066,7.90e-09,5;UBERON:0001468,7.90e-09,5;UBERON:0002242,9.19e-09,3;UBERON:0003068,9.19e-09,3;UBERON:0002328,9.19e-09,3;UBERON:0004880,9.19e-09,3;UBERON:0008835,1.79e-08,22;UBERON:0003894,1.79e-08,22;UBERON:0009854,4.96e-08,23;UBERON:0004119,1.99e-07,160;UBERON:0000925,1.99e-07,160;UBERON:0006595,1.99e-07,160;UBERON:0003104,2.60e-07,160;UBERON:0009142,2.60e-07,160;UBERON:0007499,2.98e-07,25;UBERON:0009497,2.98e-07,25;UBERON:0000015,2.98e-07,25;UBERON:0002423,2.98e-07,25;UBERON:0006235,2.98e-07,25;UBERON:0004161,2.98e-07,25;UBERON:0009856,6.56e-07,26 | |||
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|short_description=p2@CU674261 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p2@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 0bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.19e-24 | 19 |
placental epithelial cell | 9.15e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.12e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 9.19e-09 | 3 |
hepatocyte | 1.09e-07 | 12 |
central nervous system pericyte | 3.84e-07 | 2 |
amniotic epithelial cell | 6.28e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.